RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 SH3PXD2AQ5TCZ1 1133 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 NANOGP8Q6NSW7 305 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 DNAJB7Q7Z6W7 309 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 MICU2Q8IYU8 434 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 CLIP4Q8N3C7 705 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 SLC25A41Q8N5S1 370 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 SLC26A7Q8TE54 656 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 TSPEARQ8WU66 669 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 TFB1MQ8WVM0 346 aaKnown RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 TEKT5Q96M29 485 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 CSPG4P5Q96PW8 444 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 C20orf27Q9GZN8 174 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 ZNF395Q9H8N7 513 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 DNAJC28Q9NX36 388 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 PRELID3BQ9Y3B1 194 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 DTNAQ9Y4J8 743 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 PCDHB3Q9Y5E6 796 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 ERI2A8K979 691 aaKnown RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 C12orf71A8MTZ7 269 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 C2orf74A8MZ97 194 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 FAM25AB3EWG3 89 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 FAM25CB3EWG5 89 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 FAM25GB3EWG6 89 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 UGT1A9O60656 530 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 SRCP12931 536 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 MATKP42679 507 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 HOXA1P49639 335 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 BTKQ06187 659 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 SERINC3Q13530 473 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 SLC25A52Q3SY17 297 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 TCHHL1Q5QJ38 904 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 MROH9Q5TGP6 573 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 GARNL3Q5VVW2 1013 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 C9orf57Q5W0N0 161 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 MBLAC2Q68D91 279 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 NCBP2-AS2Q69YL0 99 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 HEATR6Q6AI08 1181 aaKnown RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 HTR3CQ8WXA8 447 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 ATP2A3Q93084 1043 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 TP53INP1Q96A56 240 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 CITED4Q96RK1 184 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 BBS4Q96RK4 519 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 MRPL45Q9BRJ2 306 aaKnown RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 APOL6Q9BWW8 343 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 UGT1A7Q9HAW7 530 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 UGT1A10Q9HAW8 530 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 UGT1A8Q9HAW9 530 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 NFKBIL1Q9UBC1 381 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 DAPK2Q9UIK4 370 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 TRMT6Q9UJA5 497 aaKnown RBP8.17□□□□□ -1.1
GARNL3-201ENST00000373386 FBXL21Q9UKT6 434 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 FZD10Q9ULW2 581 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 AP4E1Q9UPM8 1137 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 SESN1Q9Y6P5 492 aa8.17□□□□□ -1.1
GARNL3-201ENST00000373386 SMIM35A0A1B0GVV1 85 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PLK4O00444 970 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 KLHL18O94889 574 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CTSHP09668 335 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PRG2P13727 222 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CAPN3P20807 821 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 WARSP23381 471 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 MAP4P27816 1152 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 HOXA11P31270 313 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SLC1A6P48664 564 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 FNTBP49356 437 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SLC25A3Q00325 362 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SCAPQ12770 1279 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PPP2R5DQ14738 602 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 OXA1LQ15070 435 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ATAD3BQ5T9A4 648 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 FAXCQ5TGI0 409 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 UBE2UQ5VVX9 321 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PYHIN1Q6K0P9 492 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 NOTUMQ6P988 496 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ZCCHC23Q6ZST2 131 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 NUP54Q7Z3B4 507 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 KLHDC8BQ8IXV7 354 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 TOP6BLQ8N6T0 577 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 HEXDCQ8WVB3 486 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 COPS5Q92905 334 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ZUFSPQ96AP4 578 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CMTM5Q96DZ9 223 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ZNF845Q96IR2 970 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CPB2Q96IY4 423 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PIWIL1Q96J94 861 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 LRGUKQ96M69 825 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CAMK1GQ96NX5 476 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 BTBD9Q96Q07 612 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ACPTQ9BZG2 426 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ELP3Q9H9T3 547 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 BCAP29Q9UHQ4 241 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 KAT6AQ92794 2004 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 HMX2A2RU54 273 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 MBLAC1A4D2B0 266 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 H3BRB1 525 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 L7N2F9 121 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PER2O15055 1255 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ITM2AO43736 263 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 H2AFYO75367 372 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms