RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 PACSIN2Q9UNF0 486 aaPredicted RBP13.11□□□□□ -0.31
CLCC1-202ENST00000348264 DNAJC16Q9Y2G8 782 aa13.11□□□□□ -0.31
CLCC1-202ENST00000348264 HELZ2Q9BYK8 2649 aaKnown RBP13.1□□□□□ -0.31
CLCC1-202ENST00000348264 SPTA1P02549 2419 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 KIR2DS5A0A0G2JLQ3 304 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 A0A0G2JNG1 304 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 KIR2DS3K7RE56 304 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 KCNN4O15554 427 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 DUX1O43812 170 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 VEGFDO43915 354 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 CDK14O94921 469 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 PRB1P04280 392 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 SLC2A4P14672 509 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 ZNF7P17097 686 aaPredicted RBP13.1□□□□□ -0.31
CLCC1-202ENST00000348264 CDC25BP30305 580 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 ADRA1AP35348 466 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 GEMP55040 296 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 VAC14Q08AM6 782 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 TRA2AQ13595 282 aaKnown RBP eCLIP13.1□□□□□ -0.318e-6■□□□□ 8.1
CLCC1-202ENST00000348264 PTPRCAPQ14761 206 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 KIR2DS5Q14953 304 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 CHRNA6Q15825 494 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 SEPT7Q16181 437 aaKnown RBP13.1□□□□□ -0.31
CLCC1-202ENST00000348264 ANKRD20A2Q5SQ80 823 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 ANKRD20A1Q5TYW2 823 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 ANKRD20A3Q5VUR7 823 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 ITPRIPL1Q6GPH6 555 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 C11orf96Q7Z7L8 435 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 SLC9B2Q86UD5 537 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 ZFAND4Q86XD8 727 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 OR10G6Q8NH81 332 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 CCDC110Q8TBZ0 833 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 SNRNP27Q8WVK2 155 aaKnown RBP13.1□□□□□ -0.31
CLCC1-202ENST00000348264 AHCYL2Q96HN2 611 aaKnown RBP13.1□□□□□ -0.31
CLCC1-202ENST00000348264 APOL2Q9BQE5 337 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 TIMM29Q9BSF4 260 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 STN1Q9H668 368 aaKnown RBP13.1□□□□□ -0.31
CLCC1-202ENST00000348264 WDR70Q9NW82 654 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
CLCC1-202ENST00000348264 CPNE7Q9UBL6 633 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 ZNF462Q96JM2 2506 aa13.1□□□□□ -0.31
CLCC1-202ENST00000348264 PIKFYVEQ9Y2I7 2098 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 GLYATL1P3A0A0U1RQE8 302 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 K7ENP7 123 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 KMOO15229 486 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 DDX3YO15523 660 aaKnown RBP13.09□□□□□ -0.31
CLCC1-202ENST00000348264 UGT1A9O60656 530 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 ANXA9O76027 345 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 FTCDO95954 541 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 LIPCP11150 499 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 FGF3P11487 239 aaPredicted RBP13.09□□□□□ -0.31
CLCC1-202ENST00000348264 UGT1A6P19224 532 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 UGT1A1P22309 533 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 UGT1A4P22310 534 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 UGT1A3P35503 534 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 MAPK9P45984 424 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 PPM1FP49593 454 aaPredicted RBP13.09□□□□□ -0.31
CLCC1-202ENST00000348264 ARSDP51689 593 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 EPHA4P54764 986 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 TMEM71Q6P5X7 295 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 DARS2Q6PI48 645 aaKnown RBP13.09□□□□□ -0.31
CLCC1-202ENST00000348264 INO80CQ6PI98 192 aaPredicted RBP13.09□□□□□ -0.31
CLCC1-202ENST00000348264 PEX26Q7Z412 305 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 TRAPPC5Q8IUR0 188 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 DDHD1Q8NEL9 900 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 GDAP1Q8TB36 358 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 DTX3LQ8TDB6 740 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 SLC39A7Q92504 469 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 SPATA13Q96N96 652 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 CCNL2Q96S94 520 aaPredicted RBP13.09□□□□□ -0.31
CLCC1-202ENST00000348264 DPYSL5Q9BPU6 564 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 TBC1D10AQ9BXI6 508 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 UGT1A7Q9HAW7 530 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 UGT1A10Q9HAW8 530 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 UGT1A8Q9HAW9 530 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 AKAP7Q9P0M2 348 aaPredicted RBP13.09□□□□□ -0.31
CLCC1-202ENST00000348264 PDP2Q9P2J9 529 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 AMFRQ9UKV5 643 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 PKP3Q9Y446 797 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 ARL5AQ9Y689 179 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 GCN1Q92616 2671 aaKnown RBP13.09□□□□□ -0.31
CLCC1-202ENST00000348264 TLN1Q9Y490 2541 aaKnown RBP13.09□□□□□ -0.31
CLCC1-202ENST00000348264 BOD1L1Q8NFC6 3051 aa13.09□□□□□ -0.31
CLCC1-202ENST00000348264 LILRA5A6NI73 299 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 OR5K4A6NMS3 321 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 PDZK1P1A8MUH7 402 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 EFSO43281 561 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 C1QL1O75973 258 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 TJP3O95049 919 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 BRAFP15056 766 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 RPL10P27635 214 aaKnown RBP13.08□□□□□ -0.32
CLCC1-202ENST00000348264 CSTF2P33240 577 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLCC1-202ENST00000348264 SLC19A1P41440 591 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 CTSCP53634 463 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 KIF5AQ12840 1032 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 TMEM115Q12893 351 aaPredicted RBP13.08□□□□□ -0.32
CLCC1-202ENST00000348264 SNAP47Q5SQN1 464 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 GPRC6AQ5T6X5 926 aa13.08□□□□□ -0.32
CLCC1-202ENST00000348264 KIAA1614Q5VZ46 1190 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms