RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CES5AQ6NT32 575 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 SERPINA13PQ6UXR4 307 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 FRMD7Q6ZUT3 714 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 CACUL1Q86Y37 369 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 PIP4K2CQ8TBX8 421 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 UTP4Q969X6 686 aaKnown RBP13.42□□□□□ -0.26
CDC42-202ENST00000344548 PTCD3Q96EY7 689 aaKnown RBP13.42□□□□□ -0.26
CDC42-202ENST00000344548 PLEKHG4BQ96PX9 1271 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 CCDC106Q9BWC9 280 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 TTYH1Q9H313 450 aaPredicted RBP13.42□□□□□ -0.26
CDC42-202ENST00000344548 RNF112Q9ULX5 631 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 TRIOBPQ9H2D6 2365 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 PRR5-ARHGAP8B1AHC4 643 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 KERAO60938 352 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 DNAJC8O75937 253 aaPredicted RBP13.42□□□□□ -0.26
CDC42-202ENST00000344548 BMP8BP34820 402 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 MMP12P39900 470 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 CPA2P48052 419 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 IL2P60568 153 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 ARHGAP8P85298 464 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 PDCD2Q16342 344 aaPredicted RBP13.42□□□□□ -0.26
CDC42-202ENST00000344548 GPRC6AQ5T6X5 926 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 LIPIQ6XZB0 460 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 CPA6Q8N4T0 437 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 STAG3L4Q8TBR4 150 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 SREK1Q8WXA9 508 aaKnown RBP13.42□□□□□ -0.26
CDC42-202ENST00000344548 DLG3Q92796 817 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDC42-202ENST00000344548 ELSPBP1Q96BH3 223 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 L3HYPDHQ96EM0 354 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 MSLNLQ96KJ4 702 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 RIOK2Q9BVS4 552 aaKnown RBP13.42□□□□□ -0.26
CDC42-202ENST00000344548 SPATA16Q9BXB7 569 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 SAR1AQ9NR31 198 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 DNAJC28Q9NX36 388 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 DKK3Q9UBP4 350 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 SUN2Q9UH99 717 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 PCDHB1Q9Y5F3 818 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 LRRK1Q38SD2 2015 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 SUPT3HB4E1H0 165 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 E9PBE3 544 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 PFDN6O15212 129 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 KLHL41O60662 606 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 SUPT3HO75486 399 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 HERVK_113P63132 956 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 SH3BP2P78314 561 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 NFKB2Q00653 900 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 PRKAA1Q13131 559 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 FBXW10Q5XX13 1052 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 CLEC6AQ6EIG7 209 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 CYHR1Q6ZMK1 362 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 DPPA4Q7L190 304 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 TECPR1Q7Z6L1 1165 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 CUZD1Q86UP6 607 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 MMAAQ8IVH4 418 aaKnown RBP13.41□□□□□ -0.26
CDC42-202ENST00000344548 YAF2Q8IY57 180 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 NKAPQ8N5F7 415 aaKnown RBP13.41□□□□□ -0.26
CDC42-202ENST00000344548 KLHL29Q96CT2 875 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 CNDP1Q96KN2 507 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 ERVK-6Q9BXR3 956 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 FAM83DQ9H4H8 585 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 PRSS16Q9NQE7 514 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 ZDHHC3Q9NYG2 299 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 ADAMTS6Q9UKP5 1117 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 MTCH2Q9Y6C9 303 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 IGLV3-16A0A075B6K0 115 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 A0A1W2PQ67 120 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 HDAC3O15379 428 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 SGTAO43765 313 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 EPHX1P07099 455 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 SERPINA6P08185 405 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 KRT16P08779 473 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 TPBGLP0DKB5 382 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 GFAPP14136 432 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 CCR7P32248 378 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 SKIV2L2P42285 1042 aaKnown RBP13.41□□□□□ -0.26
CDC42-202ENST00000344548 FOXA1P55317 472 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 ATP6V0D1P61421 351 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 EIF4HQ15056 248 aaKnown RBP13.41□□□□□ -0.26
CDC42-202ENST00000344548 SPDYAQ5MJ70 313 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 HENMT1Q5T8I9 393 aaKnown RBP13.41□□□□□ -0.26
CDC42-202ENST00000344548 TMEM198Q66K66 360 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 UGT3A1Q6NUS8 523 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 TXNDC11Q6PKC3 985 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 MACC1Q6ZN28 852 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 BEND7Q8N7W2 519 aaPredicted RBP13.41□□□□□ -0.26
CDC42-202ENST00000344548 LRIG1Q96JA1 1093 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 COPS8Q99627 209 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 MIPEPQ99797 713 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 ZBTB26Q9HCK0 441 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 ARHGEF3Q9NR81 526 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 GNPTGQ9UJJ9 305 aa13.41□□□□□ -0.26
CDC42-202ENST00000344548 EDDM13A0A1B0GTR0 161 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 K7ESM1 405 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 SKAP2O75563 359 aaPredicted RBP13.4□□□□□ -0.26
CDC42-202ENST00000344548 CDK14O94921 469 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 ZNF30P17039 623 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 PRDX3P30048 256 aaKnown RBP13.4□□□□□ -0.26
CDC42-202ENST00000344548 PTPN5P54829 565 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms