RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 MIOSQ9NXC5 875 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 C9JVG2 144 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 PER2O15055 1255 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 CCNA2P20248 432 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 AQP1P29972 269 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 NAT8LQ8N9F0 302 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 TTLL2Q9BWV7 592 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 EIF2B4Q9UI10 523 aaKnown RBP17.1■□□□□ 0.33
CDCP1-201ENST00000296129 HCRTO43612 131 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 TM7SF2O76062 418 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 CCND3P30281 292 aaPredicted RBP17.09■□□□□ 0.33
CDCP1-201ENST00000296129 HOXD13P35453 343 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 RPL4P36578 427 aaKnown RBP17.09■□□□□ 0.33
CDCP1-201ENST00000296129 NRLP54845 237 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 TAF13Q15543 124 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 LRRC73Q5JTD7 316 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 CHD2O14647 1828 aaKnown RBP17.09■□□□□ 0.33
CDCP1-201ENST00000296129 LSM3P62310 102 aaKnown RBP17.09■□□□□ 0.33
CDCP1-201ENST00000296129 LACTB2Q53H82 288 aaPredicted RBP17.09■□□□□ 0.33
CDCP1-201ENST00000296129 GLYATQ6IB77 296 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 SLC35B2Q8TB61 432 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 TDRD1Q9BXT4 1180 aaKnown RBP17.09■□□□□ 0.33
CDCP1-201ENST00000296129 SAMD4AQ9UPU9 718 aaKnown RBP17.09■□□□□ 0.33
CDCP1-201ENST00000296129 U3KQV3 271 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 TOPAZ1Q8N9V7 1692 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 TRBV23OR9-2A0A075B6M9 112 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 PNMA8CA0A1B0GUJ8 204 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 OR4F21O95013 312 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 HLA-DQB2P05538 268 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 FAM182AQ5T1J6 154 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 OR7A2PQ8NGA2 310 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 NUAK2Q9H093 628 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 TTC24A2A3L6 582 aaPredicted RBP17.09■□□□□ 0.33
CDCP1-201ENST00000296129 KIR3DL1P43629 444 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 GRB14Q14449 540 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 TMEM110Q86TL2 294 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 SUSD3Q96L08 255 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 GATA5Q9BWX5 397 aaPredicted RBP17.09■□□□□ 0.33
CDCP1-201ENST00000296129 EPB41L1Q9H4G0 881 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 GSTK1Q9Y2Q3 226 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 SLC7A4O43246 635 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 DGKGP49619 791 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 TAS2R41P59536 307 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 CRYBG2Q8N1P7 616 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 EQTNQ9NQ60 294 aa17.09■□□□□ 0.33
CDCP1-201ENST00000296129 IDSP22304 550 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 PLEKHG4Q58EX7 1191 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 PAOXQ6QHF9 649 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.08■□□□□ 0.33
CDCP1-201ENST00000296129 HIPK1Q86Z02 1210 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 TBC1D21Q8IYX1 336 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 SFRP1Q8N474 314 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.08■□□□□ 0.33
CDCP1-201ENST00000296129 PIP5K1BO14986 540 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 OGNP20774 298 aaKnown RBP17.08■□□□□ 0.33
CDCP1-201ENST00000296129 NR1H2P55055 460 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 SLC20A2Q08357 652 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 DPYSQ14117 519 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 OR2T34Q8NGX1 318 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 OR2T3Q8NH03 318 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 ENKURQ8TC29 256 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 FCRL5Q96RD9 977 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 C3orf14Q9HBI5 128 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 PSMD13Q9UNM6 376 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 Q9Y3F1 56 aa17.08■□□□□ 0.33
CDCP1-201ENST00000296129 DYTNA2CJ06 578 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 ARVCFO00192 962 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 ZNF792Q3KQV3 632 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 KIAA0930Q6ICG6 404 aaPredicted RBP17.08■□□□□ 0.32
CDCP1-201ENST00000296129 HFE2Q6ZVN8 426 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 PGAM4Q8N0Y7 254 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 FLCNQ8NFG4 579 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 VANGL1Q8TAA9 524 aaPredicted RBP17.08■□□□□ 0.32
CDCP1-201ENST00000296129 ZNF671Q8TAW3 534 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 TEX47Q8TBZ9 253 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 KCTD13Q8WZ19 329 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 SEMA3GQ9NS98 782 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 TTKP33981 857 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 MTHFRP42898 656 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 PTGER3P43115 390 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 ZNF132P52740 706 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 RAB14P61106 215 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 ATAT1Q5SQI0 421 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 SNAP47Q5SQN1 464 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 GALNT13Q8IUC8 556 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 PLEKHO2Q8TD55 490 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 LRRC15Q8TF66 581 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 OSER1Q9NX31 292 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 CCDC85CA6NKD9 419 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.08■□□□□ 0.32
CDCP1-201ENST00000296129 GTPBP1O00178 669 aaKnown RBP17.08■□□□□ 0.32
CDCP1-201ENST00000296129 GRIA1P42261 906 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 CLK3P49761 638 aaKnown RBP17.08■□□□□ 0.32
CDCP1-201ENST00000296129 SEMG2Q02383 582 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 C2orf80Q0P641 193 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 UXS1Q8NBZ7 420 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 EVA1BQ9NVM1 165 aa17.08■□□□□ 0.32
CDCP1-201ENST00000296129 GSTT1P30711 240 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 TAS2R39P59534 338 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 ERVK-21P61565 698 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms