RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 CLCN7P51798 805 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 MYBPC1Q00872 1141 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 SEMG2Q02383 582 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 VEPH1Q14D04 833 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 CNPY1Q3B7I2 92 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 FUT11Q495W5 492 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 BLOC1S3Q6QNY0 202 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 ADAMTS19Q8TE59 1207 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 KCNJ9Q92806 393 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 PBXIP1Q96AQ6 731 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 RPL10LQ96L21 214 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 SPATA16Q9BXB7 569 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 SLC52A3Q9NQ40 469 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 EVLQ9UI08 416 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 COMMD10Q9Y6G5 202 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 ANAPC1Q9H1A4 1944 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 AKAP10O43572 662 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 UROSP10746 265 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 HSPA8P11142 646 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 ATP6V1B1P15313 513 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 CKMT2P17540 419 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 SLC6A2P23975 617 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 PTGER3P43115 390 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 RABL3Q5HYI8 236 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 GPRIN3Q6ZVF9 776 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 OR56A4Q8NGH8 313 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 OR2T34Q8NGX1 318 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 OR2T3Q8NH03 318 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 SLAMF8Q9P0V8 285 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 LZTS1Q9Y250 596 aa18.16■□□□□ 0.5
SHKBP1-201ENST00000291842 ASPDHA6ND91 283 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 KIF3CO14782 793 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 MATN4O95460 622 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 STAMBPO95630 424 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 MLYCDO95822 493 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 CHEK2O96017 543 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 UGT1A6P19224 532 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 CLCN4P51793 760 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 PAGE3Q5JUK9 113 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 TXNDC11Q6PKC3 985 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 SLC30A9Q6PML9 568 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 CLDN19Q8N6F1 224 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 NUDT8Q8WV74 236 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 CEP295NLQ96MC4 621 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 DEFB118Q96PH6 123 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 HOPXQ9BPY8 73 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 OR51B4Q9Y5P0 310 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 CPQQ9Y646 472 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 AHCYL1O43865 530 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 FZD6O60353 706 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 TPST1O60507 370 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 KATNA1O75449 491 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 GUCA1CO95843 209 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 ESR1P03372 595 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 SOD2P04179 222 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 NELFEP18615 380 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 GSTT1P30711 240 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 ERVPABLB-1P60509 514 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 CACNG1Q06432 222 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 AARS2Q5JTZ9 985 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 LETMD1Q6P1Q0 360 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 FRA10AC1Q70Z53 315 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 MYO1HQ8N1T3 1032 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 MINDY1Q8N5J2 469 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 MYO19Q96H55 970 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 PRPF18Q99633 342 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 CIPCQ9C0C6 399 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 P2RY12Q9H244 342 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 AIG1Q9NVV5 245 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 ABCD2Q9UBJ2 740 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 CLEC4EQ9ULY5 219 aa18.15■□□□□ 0.5
SHKBP1-201ENST00000291842 A0A1B0GTW7 788 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 FAM149AA5PLN7 773 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 H7C0S8 307 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 AP1G1O43747 822 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 PRAMEF1O95521 474 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 PRR35P0CG20 571 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 UGT1A1P22309 533 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 UGT1A4P22310 534 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 UGT1A3P35503 534 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 UGT1A5P35504 534 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 HMGCLP35914 325 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 KCNK10P57789 538 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 NFYCQ13952 458 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 IKBKEQ14164 716 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 INO80DQ53TQ3 878 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 XKR7Q5GH72 579 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 ARMC12Q5T9G4 340 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 PTRHD1Q6GMV3 140 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 FNDC5Q8NAU1 212 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 LKAAEAR1Q8TD35 194 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 DIS3LQ8TF46 1054 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 PIH1D2Q8WWB5 315 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 C1QTNF3Q9BXJ4 246 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 TNKS2Q9H2K2 1166 aa18.14■□□□□ 0.49
SHKBP1-201ENST00000291842 PRMT5O14744 637 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-201ENST00000291842 GREM1O60565 184 aa18.13■□□□□ 0.49
SHKBP1-201ENST00000291842 VPS4BO75351 444 aa18.13■□□□□ 0.49
SHKBP1-201ENST00000291842 MTHFD1P11586 935 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-201ENST00000291842 ZFP36L2P47974 494 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms