RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CDYL2Q8N8U2 506 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 PROKR1Q8TCW9 393 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 SLC22A17Q8WUG5 538 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 KIAA1191Q96A73 305 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 ZNF599Q96NL3 588 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 TMEM221A6NGB7 291 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 H0YAE9 185 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 NOBOXO60393 691 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 ITGB1P05556 798 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 PRR35P0CG20 571 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 NFKBIAP25963 317 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 PLA2G16P53816 162 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 METTL23Q86XA0 190 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 UMODL1-AS1Q8N2C9 162 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 NEURL2Q9BR09 285 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 HGH1Q9BTY7 390 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 YTHDF1Q9BYJ9 559 aaKnown RBP27.24■■□□□ 1.95
CBX4-201ENST00000269397 MED16Q9Y2X0 877 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 PCDHGA4Q9Y5G9 962 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 DICER1Q9UPY3 1922 aaKnown RBP27.23■■□□□ 1.95
CBX4-201ENST00000269397 BTN3A1O00481 513 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 ADAM23O75077 832 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 THRBP10828 461 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 HTR1EP28566 365 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 ALDH3A2P51648 485 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 LAPTM5Q13571 262 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 DAG1Q14118 895 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 PIWIL3Q7Z3Z3 882 aaKnown RBP27.23■■□□□ 1.95
CBX4-201ENST00000269397 CHPT1Q8WUD6 406 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 BEGAINQ9BUH8 593 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 LRRC3Q9BY71 257 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 TOR3AQ9H497 397 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 TSR3Q9UJK0 312 aaKnown RBP27.23■■□□□ 1.95
CBX4-201ENST00000269397 FNDC3AQ9Y2H6 1198 aaKnown RBP27.23■■□□□ 1.95
CBX4-201ENST00000269397 LOC285095A0A1B0GVY8 99 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 C17orf102A2RUQ5 167 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 VPS4BO75351 444 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 SULT1C4O75897 302 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 ALPLP05186 524 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 HTR7P34969 479 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 DGKQP52824 942 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 EMX2Q04743 252 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 IGFN1Q86VF2 1251 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 LRRC49Q8IUZ0 686 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 SMIM14Q96QK8 99 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 PSME2Q9UL46 239 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 ACTL7AQ9Y615 435 aa27.23■■□□□ 1.95
CBX4-201ENST00000269397 XYLBO75191 536 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 CLPXO76031 633 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 OR4F21O95013 312 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 MTHFRP42898 656 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 SUOXP51687 545 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 STC1P52823 247 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 MEP1AQ16819 746 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 ITFG1Q8TB96 612 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 PNPT1Q8TCS8 783 aaKnown RBP27.22■■□□□ 1.95
CBX4-201ENST00000269397 ZC3H15Q8WU90 426 aaKnown RBP27.22■■□□□ 1.95
CBX4-201ENST00000269397 IGSF8Q969P0 613 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 FUBP1Q96AE4 644 aaKnown RBP27.22■■□□□ 1.95
CBX4-201ENST00000269397 PKMYT1Q99640 499 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 GPR21Q99679 349 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 CARS2Q9HA77 564 aaKnown RBP27.22■■□□□ 1.95
CBX4-201ENST00000269397 UTS2RQ9UKP6 389 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 PCDHGA8Q9Y5G5 932 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 RPP40O75818 363 aaKnown RBP27.22■■□□□ 1.95
CBX4-201ENST00000269397 CRHBPP24387 322 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 CDKN1CP49918 316 aaPredicted RBP27.22■■□□□ 1.95
CBX4-201ENST00000269397 SPCS2Q15005 226 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 RGS21Q2M5E4 152 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 PDCD4Q53EL6 469 aaKnown RBP27.22■■□□□ 1.95
CBX4-201ENST00000269397 C6orf136Q5SQH8 315 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 TRIM62Q9BVG3 475 aa27.22■■□□□ 1.95
CBX4-201ENST00000269397 ABCB7O75027 752 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 RPS17P08708 135 aaKnown RBP27.21■■□□□ 1.95
CBX4-201ENST00000269397 CDH1P12830 882 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 ACVRL1P37023 503 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 TPD52P55327 224 aaPredicted RBP27.21■■□□□ 1.95
CBX4-201ENST00000269397 MS4A13Q5J8X5 152 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 OVOS1Q6IE37 1185 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 PROSER1Q86XN7 944 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 HID1Q8IV36 788 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 SPARTQ8N0X7 666 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 ZYG11BQ9C0D3 744 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 EXD2Q9NVH0 621 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 GMIPQ9P107 970 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 GNPTGQ9UJJ9 305 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 SLC27A5Q9Y2P5 690 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 TNFRSF10BO14763 440 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 TBX18O95935 607 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 CHEK2O96017 543 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 ENO2P09104 434 aaPredicted RBP27.21■■□□□ 1.95
CBX4-201ENST00000269397 AQP6Q13520 282 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 SPATS1Q496A3 300 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 XKR7Q5GH72 579 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 MSANTD2Q6P1R3 559 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 THAP5Q7Z6K1 395 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 SPATA2LQ8IUW3 424 aaPredicted RBP27.21■■□□□ 1.95
CBX4-201ENST00000269397 OR52B6Q8NGF0 335 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 FBXO30Q8TB52 745 aa27.21■■□□□ 1.95
CBX4-201ENST00000269397 TSPEARQ8WU66 669 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms