RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NDUFS3O75489 264 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 GSTA1P08263 222 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 OGNP20774 298 aaKnown RBP27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 GP5P40197 560 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 RBM20Q5T481 1227 aaKnown RBP27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 MROH9Q5TGP6 573 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 DET1Q7L5Y6 550 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 TMEFF1Q8IYR6 380 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 CLDN19Q8N6F1 224 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 GLYATL1Q969I3 302 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 MCMBPQ9BTE3 642 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 PAPOLBQ9NRJ5 636 aaKnown RBP27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 MTO1Q9Y2Z2 717 aaKnown RBP27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 OAS3Q9Y6K5 1087 aaKnown RBP27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 IKBKGQ9Y6K9 419 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 POM121BA6NF01 834 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 LATO43561 262 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 MAOBP27338 520 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 MDH1P40925 334 aaKnown RBP27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 LEPRP48357 1165 aaKnown RBP27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 AGERQ15109 404 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 TTMPQ5BVD1 217 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 ADGRD1Q6QNK2 874 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 BMP8AQ7Z5Y6 402 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 ZC3HC1Q86WB0 502 aaKnown RBP27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 HEATR4Q86WZ0 1026 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 BTN2A2Q8WVV5 523 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 LPGAT1Q92604 370 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 RBBP8Q99708 897 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 CDH19Q9H159 772 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 EURLQ9NYK6 297 aa27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.2■■□□□ 1.94
SMARCD3-201ENST00000262188 VPS13AQ96RL7 3174 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 SDK1Q7Z5N4 2213 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 SLC25A14O95258 325 aaPredicted RBP27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 FMO4P31512 558 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 EIF3BP55884 814 aaKnown RBP27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 GPR33Q49SQ1 333 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 HHATQ5VTY9 493 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 ZNF549Q6P9A3 640 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 ARMCX6Q7L4S7 300 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 ARHGAP22Q7Z5H3 698 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 B4GALNT2Q8NHY0 566 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 SPACA7Q96KW9 195 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 CAB39LQ9H9S4 337 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 PSMC3IPQ9P2W1 217 aaPredicted RBP27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 SLC24A2Q9UI40 661 aa27.19■■□□□ 1.94
SMARCD3-201ENST00000262188 MAP3K13O43283 966 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 TCEA3O75764 348 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 SAT1P21673 171 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 SCTRP47872 440 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 SLC41A1Q8IVJ1 513 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 MIPOL1Q8TD10 442 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 VPS39Q96JC1 886 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 CFAP73A6NFT4 308 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 GMPRP36959 345 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 TTPAP49638 278 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 NAB1Q13506 487 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 PDE1CQ14123 709 aaPredicted RBP27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 RAVER1Q8IY67 606 aaKnown RBP27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 TSC22D3Q99576 134 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 TMEM98Q9Y2Y6 226 aa27.18■■□□□ 1.94
SMARCD3-201ENST00000262188 IQCF5A8MTL0 148 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 HMGB1P1B2RPK0 211 aaPredicted RBP27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 HOXA6P31267 233 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 AKT1P31749 480 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 ELF3P78545 371 aaPredicted RBP27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 DOK6Q6PKX4 331 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 KIAA0408Q6ZU52 694 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 LMNTD2Q8IXW0 634 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 HSPA12BQ96MM6 686 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 ORAI3Q9BRQ5 295 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 TMEM109Q9BVC6 243 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 SMOXQ9NWM0 555 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 ZDHHC3Q9NYG2 299 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 DNAH14Q0VDD8 3507 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 ITGA2BP08514 1039 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 HNRNPA2B1P22626 353 aaKnown RBP27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 CCR5P51681 352 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 AARS2Q5JTZ9 985 aaKnown RBP27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 CTSL3PQ5NE16 218 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 GRTP1Q5TC63 336 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 THEMIS2Q5TEJ8 643 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 ARL8AQ96BM9 186 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 BIRC8Q96P09 236 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 VPS35Q96QK1 796 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 COPS8Q99627 209 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 ROPN1BQ9BZX4 212 aaPredicted RBP27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 RHOJQ9H4E5 214 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 ROPN1Q9HAT0 212 aaPredicted RBP27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 FETUBQ9UGM5 382 aa27.17■■□□□ 1.94
SMARCD3-201ENST00000262188 POLD2P49005 469 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 CCNG1P51959 295 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 LIMK2P53671 638 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 CDK3Q00526 305 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 KCTD16Q68DU8 428 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 WDR5BQ86VZ2 330 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 DCLK2Q8N568 766 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 ULK4Q96C45 1275 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms