RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 RTL4Q6ZR62 310 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 PLPPR4Q7Z2D5 763 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 ZZZ3Q8IYH5 903 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 RBM15BQ8NDT2 890 aaKnown RBP4.77□□□□□ -1.65
RC3H1-201ENST00000258349 SRFBP1Q8NEF9 429 aaKnown RBP4.77□□□□□ -1.65
RC3H1-201ENST00000258349 SHC3Q92529 594 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 PRMT6Q96LA8 375 aaPredicted RBP4.77□□□□□ -1.65
RC3H1-201ENST00000258349 NODALQ96S42 347 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 FAM129BQ96TA1 746 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 AGAP2Q99490 1192 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 SEMA3CQ99985 751 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 AIF1LQ9BQI0 150 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 SLC22A4Q9H015 551 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF224Q9NZL3 707 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 AGO1Q9UL18 857 aaKnown RBP4.77□□□□□ -1.65
RC3H1-201ENST00000258349 TBC1D24Q9ULP9 559 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 PDE10AQ9Y233 779 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 PTCH2Q9Y6C5 1203 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 EML1O00423 815 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 CXCL11O14625 94 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 CCNB2O95067 398 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 GJB6O95452 261 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 ELFN1P0C7U0 828 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 CTSEP14091 401 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF3P17036 446 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 ABL2P42684 1182 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 MAGEA2P43356 314 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 ZC3H12AQ5D1E8 599 aaKnown RBP4.77□□□□□ -1.65
RC3H1-201ENST00000258349 KCTD8Q6ZWB6 473 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 PHYKPLQ8IUZ5 450 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 GLB1L3Q8NCI6 653 aaPredicted RBP4.77□□□□□ -1.65
RC3H1-201ENST00000258349 MYO19Q96H55 970 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 WDR37Q9Y2I8 494 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 FESP07332 822 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 AQP4P55087 323 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 CDH8P55286 799 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 GRB14Q14449 540 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 QPCTQ16769 361 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 EGFLAMQ63HQ2 1017 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 IQSEC1Q6DN90 963 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 TAPT1Q6NXT6 567 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 IRF2BP2Q7Z5L9 587 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 ERI1Q8IV48 349 aaKnown RBP4.77□□□□□ -1.65
RC3H1-201ENST00000258349 FAM13CQ8NE31 585 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 DNAJB8Q8NHS0 232 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 KCTD4Q8WVF5 259 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 EZH1Q92800 747 aaPredicted RBP4.77□□□□□ -1.65
RC3H1-201ENST00000258349 HDAC10Q969S8 669 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 SLCO1B3Q9NPD5 702 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 C11orf16Q9NQ32 467 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 C12orf4Q9NQ89 552 aa4.77□□□□□ -1.65
RC3H1-201ENST00000258349 MRC1P22897 1456 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 RREB1Q92766 1687 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 PRAMEF33A0A0G2JMD5 474 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 PRAMEF10O60809 474 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 PEX11AO75192 247 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 NDUFS2O75306 463 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 LYPLA1O75608 230 aaPredicted RBP4.76□□□□□ -1.65
RC3H1-201ENST00000258349 IFNA16P05015 189 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 CCR10P46092 362 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 RPS9P46781 194 aaKnown RBP4.76□□□□□ -1.65
RC3H1-201ENST00000258349 GNPDA1P46926 289 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 ACADVLP49748 655 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 ECT2LQ008S8 904 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 LCP2Q13094 533 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 FAM46CQ5VWP2 391 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 C9orf57Q5W0N0 161 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 C11orf65Q8NCR3 313 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 TMEM161BQ8NDZ6 487 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 PPTC7Q8NI37 304 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 SUSD6Q92537 303 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 NXNL1Q96CM4 212 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 UNC93B1Q9H1C4 597 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 STARD7Q9NQZ5 370 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 SOHLH2Q9NX45 425 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 XPR1Q9UBH6 696 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 FBXO10Q9UK96 956 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 MRPS33Q9Y291 106 aaKnown RBP4.76□□□□□ -1.65
RC3H1-201ENST00000258349 PCDHGB1Q9Y5G3 927 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 COLEC10Q9Y6Z7 277 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 PEPDP12955 493 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 ATF4P18848 351 aaPredicted RBP4.76□□□□□ -1.65
RC3H1-201ENST00000258349 MPSTP25325 297 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 TIE1P35590 1138 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 DCST1Q5T197 706 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 PGBD2Q6P3X8 592 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 PAMR1Q6UXH9 720 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 C17orf64Q86WR6 236 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 PPM1MQ96MI6 270 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 CCDC115Q96NT0 180 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 TUBGCP5Q96RT8 1024 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 ANKRA2Q9H9E1 313 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 KCTD5Q9NXV2 234 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 MTRRQ9UBK8 725 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 RAB23Q9ULC3 237 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 VWA7Q9Y334 891 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 N6AMT1Q9Y5N5 214 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 ANXA2P2A6NMY6 339 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 IFNW1P05000 195 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 LGALS2P05162 132 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms