RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 RHOBTB2Q9BYZ6 727 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 UBXN7O94888 489 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 KLHL18O94889 574 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 SAGP10523 405 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 NRG1Q02297 640 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 FAM91A1Q658Y4 838 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 ATP6V1C2Q8NEY4 427 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 PNPOQ9NVS9 261 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 CRNNQ9UBG3 495 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 FBXW2Q9UKT8 454 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 ERVK-11Q9UQG0 969 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 A0A0J9YYE9 177 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 BPGMP07738 259 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 OMPP47874 163 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 CARD16Q5EG05 197 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 BROXQ5VW32 411 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 LDB1Q86U70 411 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 C12orf66Q96MD2 445 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 NOL11Q9H8H0 719 aaKnown RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 TTKP33981 857 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 NSG1P42857 185 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 HSPA7P48741 367 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 ZBTB6Q15916 424 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 TSTD2Q5T7W7 516 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 ZNF730Q6ZMV8 503 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 LRRN4CLQ8ND94 238 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 ZNF514Q96K75 400 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 JSRP1Q96MG2 331 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 HOPXQ9BPY8 73 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 YIPF1Q9Y548 306 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 CDKN2BP42772 138 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 SLC7A2P52569 658 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 CHIT1Q13231 466 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 ESRP1Q6NXG1 681 aaKnown RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 PRSS58Q8IYP2 241 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 UBASH3BQ8TF42 649 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 ACDQ96AP0 544 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 NXNL1Q96CM4 212 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 PRICKLE1Q96MT3 831 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-201ENST00000219334 RHBDL2Q9NX52 303 aa18.79■□□□□ 0.6
SMPD3-201ENST00000219334 ESR1P03372 595 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 ABRAXAS1Q6UWZ7 409 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 SNX20Q7Z614 316 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 ZNF567Q8N184 647 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 PYROXD2Q8N2H3 581 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 MECRQ9BV79 373 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 RAB11FIP5Q9BXF6 653 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 EHD3Q9NZN3 535 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 MROH1Q8NDA8 1641 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 NFKBIEO00221 500 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 TIE1P35590 1138 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 PTGER3P43115 390 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 TRABD2AQ86V40 505 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 ATCAYQ86WG3 371 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 AMER2Q8N7J2 671 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 SLC44A1Q8WWI5 657 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 TMEM175Q9BSA9 504 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 FKBPLQ9UIM3 349 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 KPNA4O00629 521 aaPredicted RBP18.78■□□□□ 0.6
SMPD3-201ENST00000219334 NRP2O60462 931 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 C8GP07360 202 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 ACTR1BP42025 376 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 ACTR1AP61163 376 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 RFTN1Q14699 578 aaPredicted RBP18.78■□□□□ 0.6
SMPD3-201ENST00000219334 TTMPQ5BVD1 217 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 PTCHD4Q6ZW05 846 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 SIPA1Q96FS4 1042 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 A0A1W2PPM1 405 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 ENPP3O14638 875 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 GMFGO60234 142 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 GOT2P00505 430 aaKnown RBP18.78■□□□□ 0.6
SMPD3-201ENST00000219334 RGS8P57771 180 aaPredicted RBP18.78■□□□□ 0.6
SMPD3-201ENST00000219334 SULT1C3Q6IMI6 304 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 MZT2BQ6NZ67 158 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 AMZ2Q86W34 360 aa18.78■□□□□ 0.6
SMPD3-201ENST00000219334 CPSF7Q8N684 471 aaKnown RBP18.78■□□□□ 0.6
SMPD3-201ENST00000219334 TMCC2O75069 709 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 SIN3BO75182 1162 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 CRHR1P34998 444 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 SRP54P61011 504 aaKnown RBP18.77■□□□□ 0.6
SMPD3-201ENST00000219334 LRRC4CQ9HCJ2 640 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 ADGRE2Q9UHX3 823 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 YJEFN3A6XGL0 299 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 OR5F1O95221 314 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 CHRNGP07510 517 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 LYNP07948 512 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 DDX6P26196 483 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMPD3-201ENST00000219334 AQP1P29972 269 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 CCNFP41002 786 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 AMZ1Q400G9 498 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 CTU1Q7Z7A3 348 aaKnown RBP18.77■□□□□ 0.6
SMPD3-201ENST00000219334 SAMD14Q8IZD0 417 aaPredicted RBP18.77■□□□□ 0.6
SMPD3-201ENST00000219334 NKD2Q969F2 451 aaPredicted RBP18.77■□□□□ 0.6
SMPD3-201ENST00000219334 HMG20AQ9NP66 347 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 KLF15Q9UIH9 416 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 IL12BP29460 328 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 TAF1AQ15573 450 aaPredicted RBP18.77■□□□□ 0.6
SMPD3-201ENST00000219334 GCNT6Q5T4J0 391 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 TTC27Q6P3X3 843 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 SFRP1Q8N474 314 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms