RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 USP6P35125 1406 aa12.93□□□□□ -0.34
TP53-225ENST00000619485 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
TP53-225ENST00000619485 EIF4A2Q14240 407 aaKnown RBP12.93□□□□□ -0.34
TP53-225ENST00000619485 KIF16BQ96L93 1317 aa12.92□□□□□ -0.34
TP53-225ENST00000619485 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
TP53-225ENST00000619485 CHD1LQ86WJ1 897 aa12.92□□□□□ -0.34
TP53-225ENST00000619485 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
TP53-225ENST00000619485 FSD2A1L4K1 749 aa12.92□□□□□ -0.34
TP53-225ENST00000619485 FOXO3O43524 673 aa12.92□□□□□ -0.34
TP53-225ENST00000619485 NUCB1Q02818 461 aa12.92□□□□□ -0.34
TP53-225ENST00000619485 PNNQ9H307 717 aaKnown RBP12.92□□□□□ -0.34
TP53-225ENST00000619485 OVOS2A0A0J9YW53 1432 aa12.91□□□□□ -0.34
TP53-225ENST00000619485 OVOS2Q6IE36 1432 aa12.91□□□□□ -0.34
TP53-225ENST00000619485 SIRT1Q96EB6 747 aa12.91□□□□□ -0.34
TP53-225ENST00000619485 NALCNQ8IZF0 1738 aa12.91□□□□□ -0.34
TP53-225ENST00000619485 PIK3C2AO00443 1686 aa12.91□□□□□ -0.34
TP53-225ENST00000619485 TNPO1Q92973 898 aaKnown RBP12.91□□□□□ -0.34
TP53-225ENST00000619485 GRPEL1Q9HAV7 217 aa12.91□□□□□ -0.34
TP53-225ENST00000619485 SSH2Q76I76 1423 aa12.9□□□□□ -0.34
TP53-225ENST00000619485 CDK12Q9NYV4 1490 aaPredicted RBP12.9□□□□□ -0.34
TP53-225ENST00000619485 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
TP53-225ENST00000619485 MRE11P49959 708 aa12.9□□□□□ -0.34
TP53-225ENST00000619485 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
TP53-225ENST00000619485 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
TP53-225ENST00000619485 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
TP53-225ENST00000619485 MARF1Q9Y4F3 1742 aaKnown RBP12.89□□□□□ -0.35
TP53-225ENST00000619485 MAP3K19Q56UN5 1328 aa12.89□□□□□ -0.35
TP53-225ENST00000619485 ADAMTSL3P82987 1691 aa12.89□□□□□ -0.35
TP53-225ENST00000619485 GLIPR1L2Q4G1C9 344 aa12.89□□□□□ -0.35
TP53-225ENST00000619485 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
TP53-225ENST00000619485 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
TP53-225ENST00000619485 CD2BP2O95400 341 aaKnown RBP12.88□□□□□ -0.35
TP53-225ENST00000619485 MCM10Q7L590 875 aa12.88□□□□□ -0.35
TP53-225ENST00000619485 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
TP53-225ENST00000619485 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
TP53-225ENST00000619485 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
TP53-225ENST00000619485 TRIM44Q96DX7 344 aaPredicted RBP12.88□□□□□ -0.35
TP53-225ENST00000619485 GBP4Q96PP9 640 aa12.88□□□□□ -0.35
TP53-225ENST00000619485 SETD1BQ9UPS6 1966 aaKnown RBP12.87□□□□□ -0.35
TP53-225ENST00000619485 FCHSD2O94868 740 aa12.87□□□□□ -0.35
TP53-225ENST00000619485 RBM25P49756 843 aaKnown RBP12.87□□□□□ -0.35
TP53-225ENST00000619485 NFE2L2Q16236 605 aa12.87□□□□□ -0.35
TP53-225ENST00000619485 USHBP1Q8N6Y0 703 aa12.87□□□□□ -0.35
TP53-225ENST00000619485 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
TP53-225ENST00000619485 C14orf37Q86TY3 774 aa12.87□□□□□ -0.35
TP53-225ENST00000619485 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
TP53-225ENST00000619485 C8orf58Q8NAV2 365 aa12.86□□□□□ -0.35
TP53-225ENST00000619485 AATKQ6ZMQ8 1374 aa12.86□□□□□ -0.35
TP53-225ENST00000619485 IL16Q14005 1332 aa12.86□□□□□ -0.35
TP53-225ENST00000619485 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
TP53-225ENST00000619485 DDX17Q92841 729 aaKnown RBP12.86□□□□□ -0.35
TP53-225ENST00000619485 MBIPQ9NS73 344 aa12.86□□□□□ -0.35
TP53-225ENST00000619485 APBB1O00213 710 aa12.85□□□□□ -0.35
TP53-225ENST00000619485 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
TP53-225ENST00000619485 ORAI2Q96SN7 254 aa12.85□□□□□ -0.35
TP53-225ENST00000619485 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
TP53-225ENST00000619485 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
TP53-225ENST00000619485 CHD2O14647 1828 aaKnown RBP12.84□□□□□ -0.35
TP53-225ENST00000619485 NLRP6P59044 892 aa12.84□□□□□ -0.35
TP53-225ENST00000619485 GAS2L3Q86XJ1 694 aa12.84□□□□□ -0.35
TP53-225ENST00000619485 SNX21Q969T3 373 aa12.84□□□□□ -0.35
TP53-225ENST00000619485 ZBTB7BO15156 539 aaPredicted RBP12.84□□□□□ -0.35
TP53-225ENST00000619485 K7ELQ4 463 aaPredicted RBP12.83□□□□□ -0.36
TP53-225ENST00000619485 SSFA2P28290 1259 aa12.83□□□□□ -0.36
TP53-225ENST00000619485 CLCN1P35523 988 aa12.83□□□□□ -0.36
TP53-225ENST00000619485 KIF2CQ99661 725 aa12.83□□□□□ -0.36
TP53-225ENST00000619485 NCLP19338 710 aaKnown RBP12.83□□□□□ -0.36
TP53-225ENST00000619485 HSPA2P54652 639 aa12.83□□□□□ -0.36
TP53-225ENST00000619485 RAB3GAP1Q15042 981 aa12.83□□□□□ -0.36
TP53-225ENST00000619485 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
TP53-225ENST00000619485 GCC1Q96CN9 775 aa12.83□□□□□ -0.36
TP53-225ENST00000619485 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
TP53-225ENST00000619485 ESPNB1AK53 854 aa12.82□□□□□ -0.36
TP53-225ENST00000619485 DDIT3P35638 169 aa12.82□□□□□ -0.36
TP53-225ENST00000619485 GAS2L2Q8NHY3 880 aa12.82□□□□□ -0.36
TP53-225ENST00000619485 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
TP53-225ENST00000619485 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
TP53-225ENST00000619485 VAMP4O75379 141 aa12.82□□□□□ -0.36
TP53-225ENST00000619485 PROM2Q8N271 834 aa12.82□□□□□ -0.36
TP53-225ENST00000619485 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
TP53-225ENST00000619485 ZNF142P52746 1687 aaPredicted RBP12.81□□□□□ -0.36
TP53-225ENST00000619485 SIRT2Q8IXJ6 389 aa12.81□□□□□ -0.36
TP53-225ENST00000619485 MRPL50Q8N5N7 158 aaKnown RBP12.81□□□□□ -0.36
TP53-225ENST00000619485 EYA1Q99502 592 aa12.81□□□□□ -0.36
TP53-225ENST00000619485 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
TP53-225ENST00000619485 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
TP53-225ENST00000619485 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
TP53-225ENST00000619485 DDX49Q9Y6V7 483 aaKnown RBP12.81□□□□□ -0.36
TP53-225ENST00000619485 NCOA3Q9Y6Q9 1424 aa12.8□□□□□ -0.36
TP53-225ENST00000619485 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
TP53-225ENST00000619485 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
TP53-225ENST00000619485 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
TP53-225ENST00000619485 MTHFSDQ2M296 383 aaKnown RBP12.8□□□□□ -0.36
TP53-225ENST00000619485 CDC45O75419 566 aa12.79□□□□□ -0.36
TP53-225ENST00000619485 CHMP4BQ9H444 224 aaKnown RBP12.79□□□□□ -0.36
TP53-225ENST00000619485 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
TP53-225ENST00000619485 C16orf71Q8IYS4 520 aaPredicted RBP12.79□□□□□ -0.36
TP53-225ENST00000619485 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
TP53-225ENST00000619485 GSPT1P15170 499 aaKnown RBP12.78□□□□□ -0.36
TP53-225ENST00000619485 AMPHP49418 695 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms