RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 GAS2L2Q8NHY3 880 aa19.06■□□□□ 0.64
ZNF541-205ENST00000595558 PIK3R4Q99570 1358 aa19.06■□□□□ 0.64
ZNF541-205ENST00000595558 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
ZNF541-205ENST00000595558 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
ZNF541-205ENST00000595558 ZNF428Q96B54 188 aa19.06■□□□□ 0.64
ZNF541-205ENST00000595558 TECPR2O15040 1411 aa19.06■□□□□ 0.64
ZNF541-205ENST00000595558 APBB1O00213 710 aa19.05■□□□□ 0.64
ZNF541-205ENST00000595558 AATKQ6ZMQ8 1374 aa19.05■□□□□ 0.64
ZNF541-205ENST00000595558 PLEKHG3A1L390 1219 aa19.04■□□□□ 0.64
ZNF541-205ENST00000595558 ZBTB7CA1YPR0 619 aa19.04■□□□□ 0.64
ZNF541-205ENST00000595558 SSFA2P28290 1259 aa19.04■□□□□ 0.64
ZNF541-205ENST00000595558 CDK12Q9NYV4 1490 aaPredicted RBP19.04■□□□□ 0.64
ZNF541-205ENST00000595558 K7ELQ4 463 aaPredicted RBP19.04■□□□□ 0.64
ZNF541-205ENST00000595558 SIRT1Q96EB6 747 aa19.04■□□□□ 0.64
ZNF541-205ENST00000595558 NLRP6P59044 892 aa19.04■□□□□ 0.64
ZNF541-205ENST00000595558 MTHFSDQ2M296 383 aaKnown RBP19.04■□□□□ 0.64
ZNF541-205ENST00000595558 USHBP1Q8N6Y0 703 aa19.04■□□□□ 0.64
ZNF541-205ENST00000595558 OTUD7AQ8TE49 926 aaPredicted RBP19.04■□□□□ 0.64
ZNF541-205ENST00000595558 PLEKHG1Q9ULL1 1385 aa19.03■□□□□ 0.64
ZNF541-205ENST00000595558 ERBB4Q15303 1308 aa19.03■□□□□ 0.64
ZNF541-205ENST00000595558 USP6P35125 1406 aa19.03■□□□□ 0.64
ZNF541-205ENST00000595558 DLG5Q8TDM6 1919 aa19.02■□□□□ 0.64
ZNF541-205ENST00000595558 PLEKHM2Q8IWE5 1019 aa19.02■□□□□ 0.64
ZNF541-205ENST00000595558 AMPHP49418 695 aa19.02■□□□□ 0.63
ZNF541-205ENST00000595558 CALD1Q05682 793 aaKnown RBP19.02■□□□□ 0.63
ZNF541-205ENST00000595558 EYA1Q99502 592 aa19.01■□□□□ 0.63
ZNF541-205ENST00000595558 CIZ1Q9ULV3 898 aaPredicted RBP19.01■□□□□ 0.63
ZNF541-205ENST00000595558 XPCQ01831 940 aaPredicted RBP19.01■□□□□ 0.63
ZNF541-205ENST00000595558 F6X3S4 739 aa19■□□□□ 0.63
ZNF541-205ENST00000595558 GBP4Q96PP9 640 aa19■□□□□ 0.63
ZNF541-205ENST00000595558 CDC45O75419 566 aa19■□□□□ 0.63
ZNF541-205ENST00000595558 G2E3Q7L622 706 aa19■□□□□ 0.63
ZNF541-205ENST00000595558 CLCN1P35523 988 aa18.99■□□□□ 0.63
ZNF541-205ENST00000595558 KNDC1Q76NI1 1749 aa18.99■□□□□ 0.63
ZNF541-205ENST00000595558 C3P01024 1663 aa18.99■□□□□ 0.63
ZNF541-205ENST00000595558 SMARCA5O60264 1052 aaPredicted RBP18.98■□□□□ 0.63
ZNF541-205ENST00000595558 OVOS2A0A0J9YW53 1432 aa18.98■□□□□ 0.63
ZNF541-205ENST00000595558 OVOS2Q6IE36 1432 aa18.98■□□□□ 0.63
ZNF541-205ENST00000595558 MON2Q7Z3U7 1717 aa18.97■□□□□ 0.63
ZNF541-205ENST00000595558 RGPD8O14715 1765 aaPredicted RBP18.97■□□□□ 0.63
ZNF541-205ENST00000595558 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
ZNF541-205ENST00000595558 NAP1L5Q96NT1 182 aaPredicted RBP18.97■□□□□ 0.63
ZNF541-205ENST00000595558 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
ZNF541-205ENST00000595558 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
ZNF541-205ENST00000595558 ABTB2Q8N961 1025 aa18.97■□□□□ 0.63
ZNF541-205ENST00000595558 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
ZNF541-205ENST00000595558 CHMP4BQ9H444 224 aaKnown RBP18.97■□□□□ 0.63
ZNF541-205ENST00000595558 DCTPP1Q9H773 170 aa18.97■□□□□ 0.63
ZNF541-205ENST00000595558 TBX22Q9Y458 520 aa18.97■□□□□ 0.63
ZNF541-205ENST00000595558 RIMS1Q86UR5 1692 aaKnown RBP18.96■□□□□ 0.63
ZNF541-205ENST00000595558 CHL1O00533 1208 aa18.96■□□□□ 0.63
ZNF541-205ENST00000595558 SLC4A10Q6U841 1118 aa18.96■□□□□ 0.63
ZNF541-205ENST00000595558 PKP1Q13835 747 aa18.96■□□□□ 0.63
ZNF541-205ENST00000595558 TTC22Q5TAA0 569 aa18.95■□□□□ 0.62
ZNF541-205ENST00000595558 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
ZNF541-205ENST00000595558 AK9Q5TCS8 1911 aa18.94■□□□□ 0.62
ZNF541-205ENST00000595558 MEIS3Q99687 375 aa18.94■□□□□ 0.62
ZNF541-205ENST00000595558 ITSN1Q15811 1721 aa18.94■□□□□ 0.62
ZNF541-205ENST00000595558 AKAP12Q02952 1782 aa18.93■□□□□ 0.62
ZNF541-205ENST00000595558 ESPNB1AK53 854 aa18.93■□□□□ 0.62
ZNF541-205ENST00000595558 BAG4O95429 457 aaKnown RBP18.93■□□□□ 0.62
ZNF541-205ENST00000595558 USP26Q9BXU7 913 aa18.93■□□□□ 0.62
ZNF541-205ENST00000595558 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
ZNF541-205ENST00000595558 SETD1BQ9UPS6 1966 aaKnown RBP18.92■□□□□ 0.62
ZNF541-205ENST00000595558 SSH2Q76I76 1423 aa18.92■□□□□ 0.62
ZNF541-205ENST00000595558 ATP10DQ9P241 1426 aa18.92■□□□□ 0.62
ZNF541-205ENST00000595558 SDSP20132 328 aa18.91■□□□□ 0.62
ZNF541-205ENST00000595558 SKOR2Q2VWA4 1001 aaPredicted RBP18.91■□□□□ 0.62
ZNF541-205ENST00000595558 INTS3Q68E01 1043 aaKnown RBP18.91■□□□□ 0.62
ZNF541-205ENST00000595558 CEP85Q6P2H3 762 aa18.91■□□□□ 0.62
ZNF541-205ENST00000595558 ANKRD44Q8N8A2 993 aa18.91■□□□□ 0.62
ZNF541-205ENST00000595558 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
ZNF541-205ENST00000595558 RGS12O14924 1447 aa18.91■□□□□ 0.62
ZNF541-205ENST00000595558 CEP170BQ9Y4F5 1589 aaPredicted RBP18.9■□□□□ 0.62
ZNF541-205ENST00000595558 RTF1Q92541 710 aaKnown RBP18.9■□□□□ 0.62
ZNF541-205ENST00000595558 DDX49Q9Y6V7 483 aaKnown RBP18.9■□□□□ 0.62
ZNF541-205ENST00000595558 MSH6P52701 1360 aa18.9■□□□□ 0.62
ZNF541-205ENST00000595558 MCTP1Q6DN14 999 aa18.89■□□□□ 0.62
ZNF541-205ENST00000595558 LMOD2Q6P5Q4 547 aa18.89■□□□□ 0.62
ZNF541-205ENST00000595558 ZGPATQ8N5A5 531 aaKnown RBP18.89■□□□□ 0.62
ZNF541-205ENST00000595558 ISY1Q9ULR0 285 aaKnown RBP18.89■□□□□ 0.62
ZNF541-205ENST00000595558 USP31Q70CQ4 1352 aa18.88■□□□□ 0.61
ZNF541-205ENST00000595558 HOXC9P31274 260 aa18.88■□□□□ 0.61
ZNF541-205ENST00000595558 RABEP1Q15276 862 aa18.88■□□□□ 0.61
ZNF541-205ENST00000595558 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
ZNF541-205ENST00000595558 TRIM44Q96DX7 344 aaPredicted RBP18.87■□□□□ 0.61
ZNF541-205ENST00000595558 TSHZ3Q63HK5 1081 aa18.87■□□□□ 0.61
ZNF541-205ENST00000595558 IL17REQ8NFR9 667 aa18.87■□□□□ 0.61
ZNF541-205ENST00000595558 CRB1P82279 1406 aa18.87■□□□□ 0.61
ZNF541-205ENST00000595558 RTL1A6NKG5 1358 aa18.87■□□□□ 0.61
ZNF541-205ENST00000595558 UBE2Q2Q8WVN8 375 aa18.87■□□□□ 0.61
ZNF541-205ENST00000595558 LRRC59Q96AG4 307 aaKnown RBP18.87■□□□□ 0.61
ZNF541-205ENST00000595558 DIP2AQ14689 1571 aa18.86■□□□□ 0.61
ZNF541-205ENST00000595558 NCLP19338 710 aaKnown RBP18.86■□□□□ 0.61
ZNF541-205ENST00000595558 CLEC17AQ6ZS10 378 aa18.86■□□□□ 0.61
ZNF541-205ENST00000595558 FLT4P35916 1363 aa18.86■□□□□ 0.61
ZNF541-205ENST00000595558 NRKQ7Z2Y5 1582 aa18.86■□□□□ 0.61
ZNF541-205ENST00000595558 KLHL40Q2TBA0 621 aa18.86■□□□□ 0.61
ZNF541-205ENST00000595558 ORAI2Q96SN7 254 aa18.86■□□□□ 0.61
ZNF541-205ENST00000595558 GOLGA6L22H0YM25 854 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms