RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TTC21BQ7Z4L5 1316 aa22.96■■□□□ 1.27
DDX39A-206ENST00000587730 HMMRO75330 724 aa22.96■■□□□ 1.27
DDX39A-206ENST00000587730 FBLN1P23142 703 aa22.96■■□□□ 1.27
DDX39A-206ENST00000587730 RRAGDQ9NQL2 400 aaPredicted RBP22.96■■□□□ 1.27
DDX39A-206ENST00000587730 ATP10DQ9P241 1426 aa22.95■■□□□ 1.26
DDX39A-206ENST00000587730 CWC22Q9HCG8 908 aaKnown RBP22.95■■□□□ 1.26
DDX39A-206ENST00000587730 GSPT1P15170 499 aaKnown RBP22.94■■□□□ 1.26
DDX39A-206ENST00000587730 REC8O95072 547 aa22.93■■□□□ 1.26
DDX39A-206ENST00000587730 RGS12O14924 1447 aa22.92■■□□□ 1.26
DDX39A-206ENST00000587730 RRS1Q15050 365 aaKnown RBP22.92■■□□□ 1.26
DDX39A-206ENST00000587730 TXNDC2Q86VQ3 553 aa22.92■■□□□ 1.26
DDX39A-206ENST00000587730 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.92■■□□□ 1.26
DDX39A-206ENST00000587730 KLHL40Q2TBA0 621 aa22.92■■□□□ 1.26
DDX39A-206ENST00000587730 CEP85Q6P2H3 762 aa22.92■■□□□ 1.26
DDX39A-206ENST00000587730 OVOS2A0A0J9YW53 1432 aa22.91■■□□□ 1.26
DDX39A-206ENST00000587730 OVOS2Q6IE36 1432 aa22.91■■□□□ 1.26
DDX39A-206ENST00000587730 ST18O60284 1047 aa22.91■■□□□ 1.26
DDX39A-206ENST00000587730 EIF4A2Q14240 407 aaKnown RBP22.91■■□□□ 1.26
DDX39A-206ENST00000587730 USP26Q9BXU7 913 aa22.91■■□□□ 1.26
DDX39A-206ENST00000587730 PLEKHG3A1L390 1219 aa22.9■■□□□ 1.26
DDX39A-206ENST00000587730 PANK2Q9BZ23 570 aa22.9■■□□□ 1.26
DDX39A-206ENST00000587730 RTL1A6NKG5 1358 aa22.9■■□□□ 1.26
DDX39A-206ENST00000587730 ARHGEF10O15013 1369 aa22.9■■□□□ 1.26
DDX39A-206ENST00000587730 TNRQ92752 1358 aa22.9■■□□□ 1.26
DDX39A-206ENST00000587730 SULT6B1Q6IMI4 303 aa22.89■■□□□ 1.26
DDX39A-206ENST00000587730 ZRANB1Q9UGI0 708 aa22.89■■□□□ 1.26
DDX39A-206ENST00000587730 USP31Q70CQ4 1352 aa22.89■■□□□ 1.26
DDX39A-206ENST00000587730 FAM83GA6ND36 823 aa22.89■■□□□ 1.25
DDX39A-206ENST00000587730 GAS2L2Q8NHY3 880 aa22.89■■□□□ 1.25
DDX39A-206ENST00000587730 TRIM44Q96DX7 344 aaPredicted RBP22.89■■□□□ 1.25
DDX39A-206ENST00000587730 CD2BP2O95400 341 aaKnown RBP22.88■■□□□ 1.25
DDX39A-206ENST00000587730 CCT4P50991 539 aaKnown RBP22.88■■□□□ 1.25
DDX39A-206ENST00000587730 ANP32BQ92688 251 aaKnown RBP22.88■■□□□ 1.25
DDX39A-206ENST00000587730 OSBPL3Q9H4L5 887 aa22.87■■□□□ 1.25
DDX39A-206ENST00000587730 SOS1Q07889 1333 aaPredicted RBP22.86■■□□□ 1.25
DDX39A-206ENST00000587730 TOPAZ1Q8N9V7 1692 aa22.86■■□□□ 1.25
DDX39A-206ENST00000587730 RGPD1P0DJD0 1748 aa22.86■■□□□ 1.25
DDX39A-206ENST00000587730 UBR1Q8IWV7 1749 aa22.86■■□□□ 1.25
DDX39A-206ENST00000587730 NALCNQ8IZF0 1738 aa22.86■■□□□ 1.25
DDX39A-206ENST00000587730 BAG4O95429 457 aaKnown RBP22.86■■□□□ 1.25
DDX39A-206ENST00000587730 ARXQ96QS3 562 aa22.86■■□□□ 1.25
DDX39A-206ENST00000587730 CCDC173Q0VFZ6 552 aa22.85■■□□□ 1.25
DDX39A-206ENST00000587730 TTC21AQ8NDW8 1320 aa22.85■■□□□ 1.25
DDX39A-206ENST00000587730 MSH6P52701 1360 aa22.85■■□□□ 1.25
DDX39A-206ENST00000587730 TMEM2Q9UHN6 1383 aa22.85■■□□□ 1.25
DDX39A-206ENST00000587730 USP6P35125 1406 aa22.85■■□□□ 1.25
DDX39A-206ENST00000587730 CRB1P82279 1406 aa22.85■■□□□ 1.25
DDX39A-206ENST00000587730 DCTN1Q14203 1278 aa22.85■■□□□ 1.25
DDX39A-206ENST00000587730 PRR36Q9H6K5 1346 aa22.84■■□□□ 1.25
DDX39A-206ENST00000587730 ESPNB1AK53 854 aa22.84■■□□□ 1.25
DDX39A-206ENST00000587730 SSFA2P28290 1259 aa22.84■■□□□ 1.25
DDX39A-206ENST00000587730 RBM42Q9BTD8 480 aaKnown RBP22.84■■□□□ 1.25
DDX39A-206ENST00000587730 ERC2O15083 957 aa22.83■■□□□ 1.25
DDX39A-206ENST00000587730 SDSP20132 328 aa22.83■■□□□ 1.25
DDX39A-206ENST00000587730 MCM2P49736 904 aa22.83■■□□□ 1.25
DDX39A-206ENST00000587730 HTATSF1O43719 755 aaKnown RBP22.82■■□□□ 1.24
DDX39A-206ENST00000587730 CYP2E1P05181 493 aaPredicted RBP22.82■■□□□ 1.24
DDX39A-206ENST00000587730 DDX49Q9Y6V7 483 aaKnown RBP22.82■■□□□ 1.24
DDX39A-206ENST00000587730 LMTK3Q96Q04 1460 aa22.82■■□□□ 1.24
DDX39A-206ENST00000587730 AEBP1Q8IUX7 1158 aa22.81■■□□□ 1.24
DDX39A-206ENST00000587730 RTF1Q92541 710 aaKnown RBP22.81■■□□□ 1.24
DDX39A-206ENST00000587730 ACEP12821 1306 aa22.8■■□□□ 1.24
DDX39A-206ENST00000587730 ZNF445P59923 1031 aa22.8■■□□□ 1.24
DDX39A-206ENST00000587730 ROBO2Q9HCK4 1378 aa22.8■■□□□ 1.24
DDX39A-206ENST00000587730 SETD1BQ9UPS6 1966 aaKnown RBP22.8■■□□□ 1.24
DDX39A-206ENST00000587730 PLEKHG1Q9ULL1 1385 aa22.8■■□□□ 1.24
DDX39A-206ENST00000587730 PPP1R9BQ96SB3 815 aa22.8■■□□□ 1.24
DDX39A-206ENST00000587730 SLC4A2P04920 1241 aa22.79■■□□□ 1.24
DDX39A-206ENST00000587730 FOXD4L1Q9NU39 408 aa22.79■■□□□ 1.24
DDX39A-206ENST00000587730 KDRP35968 1356 aa22.78■■□□□ 1.24
DDX39A-206ENST00000587730 MEIS3Q99687 375 aa22.78■■□□□ 1.24
DDX39A-206ENST00000587730 SSH2Q76I76 1423 aa22.78■■□□□ 1.24
DDX39A-206ENST00000587730 SBNO1A3KN83 1393 aa22.78■■□□□ 1.24
DDX39A-206ENST00000587730 FLT4P35916 1363 aa22.78■■□□□ 1.24
DDX39A-206ENST00000587730 EPB41L2O43491 1005 aaKnown RBP22.78■■□□□ 1.24
DDX39A-206ENST00000587730 HSPA2P54652 639 aa22.78■■□□□ 1.24
DDX39A-206ENST00000587730 MCM10Q7L590 875 aa22.78■■□□□ 1.24
DDX39A-206ENST00000587730 GAS2L3Q86XJ1 694 aa22.78■■□□□ 1.24
DDX39A-206ENST00000587730 ADAMTS13Q76LX8 1427 aa22.77■■□□□ 1.24
DDX39A-206ENST00000587730 GNAI2P04899 355 aa22.77■■□□□ 1.24
DDX39A-206ENST00000587730 GNAI3P08754 354 aa22.77■■□□□ 1.24
DDX39A-206ENST00000587730 MCCP23508 829 aa22.77■■□□□ 1.24
DDX39A-206ENST00000587730 NASPP49321 788 aaPredicted RBP22.77■■□□□ 1.24
DDX39A-206ENST00000587730 C16orf71Q8IYS4 520 aaPredicted RBP22.77■■□□□ 1.24
DDX39A-206ENST00000587730 STK31Q9BXU1 1019 aa22.77■■□□□ 1.24
DDX39A-206ENST00000587730 BABAM1Q9NWV8 329 aa22.77■■□□□ 1.24
DDX39A-206ENST00000587730 NCKAP5LQ9HCH0 1330 aa22.76■■□□□ 1.23
DDX39A-206ENST00000587730 ANAPC15P60006 121 aa22.75■■□□□ 1.23
DDX39A-206ENST00000587730 SRCIN1Q9C0H9 1055 aa22.75■■□□□ 1.23
DDX39A-206ENST00000587730 TSPYL4Q9UJ04 414 aa22.75■■□□□ 1.23
DDX39A-206ENST00000587730 HS1BP3Q53T59 392 aa22.75■■□□□ 1.23
DDX39A-206ENST00000587730 PEAK1Q9H792 1746 aa22.75■■□□□ 1.23
DDX39A-206ENST00000587730 PDE1AP54750 535 aa22.74■■□□□ 1.23
DDX39A-206ENST00000587730 PTPRUQ92729 1446 aa22.73■■□□□ 1.23
DDX39A-206ENST00000587730 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
DDX39A-206ENST00000587730 CEP170BQ9Y4F5 1589 aaPredicted RBP22.73■■□□□ 1.23
DDX39A-206ENST00000587730 AOX1Q06278 1338 aa22.73■■□□□ 1.23
DDX39A-206ENST00000587730 NAP1L5Q96NT1 182 aaPredicted RBP22.73■■□□□ 1.23
DDX39A-206ENST00000587730 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-206ENST00000587730 KRT24Q2M2I5 525 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms