RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
EDC4-207ENST00000573992 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
EDC4-207ENST00000573992 CCDC171Q6TFL3 1326 aa13.68□□□□□ -0.22
EDC4-207ENST00000573992 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
EDC4-207ENST00000573992 STX6O43752 255 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
EDC4-207ENST00000573992 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 INTS4Q96HW7 963 aaKnown RBP13.67□□□□□ -0.22
EDC4-207ENST00000573992 RASSF4Q9H2L5 321 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 NUP160Q12769 1436 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 SLU7O95391 586 aaKnown RBP13.67□□□□□ -0.22
EDC4-207ENST00000573992 HMOX1P09601 288 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 CCDC73Q6ZRK6 1079 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 KIAA1524Q8TCG1 905 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
EDC4-207ENST00000573992 BRD1O95696 1058 aa13.66□□□□□ -0.22
EDC4-207ENST00000573992 EFCAB2Q5VUJ9 269 aa13.66□□□□□ -0.22
EDC4-207ENST00000573992 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
EDC4-207ENST00000573992 NAT10Q9H0A0 1025 aaKnown RBP13.66□□□□□ -0.22
EDC4-207ENST00000573992 NSFL1CQ9UNZ2 370 aaKnown RBP13.66□□□□□ -0.22
EDC4-207ENST00000573992 IL16Q14005 1332 aa13.66□□□□□ -0.22
EDC4-207ENST00000573992 KIF3BO15066 747 aa13.66□□□□□ -0.22
EDC4-207ENST00000573992 ZSCAN22P10073 491 aaPredicted RBP13.66□□□□□ -0.22
EDC4-207ENST00000573992 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
EDC4-207ENST00000573992 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
EDC4-207ENST00000573992 PYCARDQ9ULZ3 195 aa13.66□□□□□ -0.22
EDC4-207ENST00000573992 ABCC2Q92887 1545 aa13.66□□□□□ -0.22
EDC4-207ENST00000573992 HSP90B1P14625 803 aaKnown RBP13.65□□□□□ -0.22
EDC4-207ENST00000573992 ZNF165P49910 485 aa13.65□□□□□ -0.22
EDC4-207ENST00000573992 CCP110O43303 1012 aa13.65□□□□□ -0.22
EDC4-207ENST00000573992 SF3A1Q15459 793 aaKnown RBP13.65□□□□□ -0.22
EDC4-207ENST00000573992 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
EDC4-207ENST00000573992 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
EDC4-207ENST00000573992 JPH4Q96JJ6 628 aa13.65□□□□□ -0.22
EDC4-207ENST00000573992 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 C10orf67Q8IYJ2 551 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 MAGI2Q86UL8 1455 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 TERF2Q15554 542 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 ERO1AQ96HE7 468 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 SPATA32Q96LK8 384 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 TMEM51Q9NW97 253 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 SMC2O95347 1197 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 FERMT3Q86UX7 667 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 ARHGAP45Q92619 1136 aa13.64□□□□□ -0.23
EDC4-207ENST00000573992 ADAMTS12P58397 1594 aa13.63□□□□□ -0.23
EDC4-207ENST00000573992 GPATCH8Q9UKJ3 1502 aaKnown RBP13.63□□□□□ -0.23
EDC4-207ENST00000573992 ZBTB7BO15156 539 aaPredicted RBP13.63□□□□□ -0.23
EDC4-207ENST00000573992 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
EDC4-207ENST00000573992 SKILP12757 684 aa13.63□□□□□ -0.23
EDC4-207ENST00000573992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.63□□□□□ -0.23
EDC4-207ENST00000573992 KIF2CQ99661 725 aa13.63□□□□□ -0.23
EDC4-207ENST00000573992 SPAG9O60271 1321 aaKnown RBP13.63□□□□□ -0.23
EDC4-207ENST00000573992 TPM1P09493 284 aa13.63□□□□□ -0.23
EDC4-207ENST00000573992 GPATCH11Q8N954 259 aa13.63□□□□□ -0.23
EDC4-207ENST00000573992 ANKRD36BQ8N2N9 1353 aa13.63□□□□□ -0.23
EDC4-207ENST00000573992 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
EDC4-207ENST00000573992 SDF4Q9BRK5 362 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 LRRCC1Q9C099 1032 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 SPTLC3Q9NUV7 552 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 ANAPC15P60006 121 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 GPATCH3Q96I76 525 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 DDX41Q9UJV9 622 aaKnown RBP13.62□□□□□ -0.23
EDC4-207ENST00000573992 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 SNW1Q13573 536 aaKnown RBP13.62□□□□□ -0.23
EDC4-207ENST00000573992 ELF2Q15723 593 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 CERS3Q8IU89 383 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 CCDC191Q8NCU4 936 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 ACBD3Q9H3P7 528 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 TAOK2Q9UL54 1235 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 LIMCH1Q9UPQ0 1083 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
EDC4-207ENST00000573992 NCBP1Q09161 790 aaKnown RBP13.61□□□□□ -0.23
EDC4-207ENST00000573992 SYCP1Q15431 976 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 ANO6Q4KMQ2 910 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 RSPH14Q9UHP6 348 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 IQGAP2Q13576 1575 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 LMAN1P49257 510 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 FAM193AP78312 1265 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 TYRO3Q06418 890 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 DHX8Q14562 1220 aaKnown RBP13.61□□□□□ -0.23
EDC4-207ENST00000573992 LUZP1Q86V48 1076 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
EDC4-207ENST00000573992 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 DDX19AQ9NUU7 478 aaKnown RBP13.61□□□□□ -0.23
EDC4-207ENST00000573992 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 SCAND2PQ9GZW5 306 aaPredicted RBP13.61□□□□□ -0.23
EDC4-207ENST00000573992 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
EDC4-207ENST00000573992 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
EDC4-207ENST00000573992 ZSCAN31Q96LW9 406 aaPredicted RBP13.6□□□□□ -0.23
EDC4-207ENST00000573992 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
EDC4-207ENST00000573992 URI1O94763 535 aaPredicted RBP13.6□□□□□ -0.23
EDC4-207ENST00000573992 TMEM132EQ6IEE7 984 aa13.6□□□□□ -0.23
EDC4-207ENST00000573992 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
EDC4-207ENST00000573992 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 801.3 ms