RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 KIAA0232Q92628 1395 aa26.66■■□□□ 1.86
SPSB3-208ENST00000566339 DLG5Q8TDM6 1919 aa26.66■■□□□ 1.86
SPSB3-208ENST00000566339 ZNF445P59923 1031 aa26.66■■□□□ 1.86
SPSB3-208ENST00000566339 ANP32BQ92688 251 aaKnown RBP26.66■■□□□ 1.86
SPSB3-208ENST00000566339 NAP1L5Q96NT1 182 aaPredicted RBP26.66■■□□□ 1.86
SPSB3-208ENST00000566339 BAG4O95429 457 aaKnown RBP26.65■■□□□ 1.86
SPSB3-208ENST00000566339 GAS2L3Q86XJ1 694 aa26.65■■□□□ 1.86
SPSB3-208ENST00000566339 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.65■■□□□ 1.86
SPSB3-208ENST00000566339 GAS2L2Q8NHY3 880 aa26.65■■□□□ 1.86
SPSB3-208ENST00000566339 FBXO41Q8TF61 875 aa26.65■■□□□ 1.86
SPSB3-208ENST00000566339 CD2BP2O95400 341 aaKnown RBP26.64■■□□□ 1.86
SPSB3-208ENST00000566339 CYP2E1P05181 493 aaPredicted RBP26.64■■□□□ 1.86
SPSB3-208ENST00000566339 GSPT1P15170 499 aaKnown RBP26.64■■□□□ 1.86
SPSB3-208ENST00000566339 HS1BP3Q53T59 392 aa26.64■■□□□ 1.86
SPSB3-208ENST00000566339 WAPLQ7Z5K2 1190 aa26.63■■□□□ 1.85
SPSB3-208ENST00000566339 ARXQ96QS3 562 aa26.63■■□□□ 1.85
SPSB3-208ENST00000566339 PTPRCP08575 1304 aa26.63■■□□□ 1.85
SPSB3-208ENST00000566339 TOPAZ1Q8N9V7 1692 aa26.63■■□□□ 1.85
SPSB3-208ENST00000566339 RRP9O43818 475 aaKnown RBP26.63■■□□□ 1.85
SPSB3-208ENST00000566339 ANKLE2Q86XL3 938 aa26.63■■□□□ 1.85
SPSB3-208ENST00000566339 SENP3Q9H4L4 574 aaPredicted RBP26.63■■□□□ 1.85
SPSB3-208ENST00000566339 UBR1Q8IWV7 1749 aa26.63■■□□□ 1.85
SPSB3-208ENST00000566339 METP08581 1390 aa26.62■■□□□ 1.85
SPSB3-208ENST00000566339 WASLO00401 505 aaPredicted RBP26.62■■□□□ 1.85
SPSB3-208ENST00000566339 GLIPR1L2Q4G1C9 344 aa26.62■■□□□ 1.85
SPSB3-208ENST00000566339 USP26Q9BXU7 913 aa26.62■■□□□ 1.85
SPSB3-208ENST00000566339 C1orf115Q9H7X2 142 aa26.62■■□□□ 1.85
SPSB3-208ENST00000566339 ATP10DQ9P241 1426 aa26.61■■□□□ 1.85
SPSB3-208ENST00000566339 TPM2P07951 284 aa26.61■■□□□ 1.85
SPSB3-208ENST00000566339 HMOX1P09601 288 aa26.61■■□□□ 1.85
SPSB3-208ENST00000566339 SSFA2P28290 1259 aa26.61■■□□□ 1.85
SPSB3-208ENST00000566339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.61■■□□□ 1.85
SPSB3-208ENST00000566339 C8orf58Q8NAV2 365 aa26.61■■□□□ 1.85
SPSB3-208ENST00000566339 COG3Q96JB2 828 aa26.59■■□□□ 1.85
SPSB3-208ENST00000566339 ST18O60284 1047 aa26.58■■□□□ 1.85
SPSB3-208ENST00000566339 REC8O95072 547 aa26.58■■□□□ 1.85
SPSB3-208ENST00000566339 NASPP49321 788 aaPredicted RBP26.58■■□□□ 1.85
SPSB3-208ENST00000566339 DDX49Q9Y6V7 483 aaKnown RBP26.58■■□□□ 1.85
SPSB3-208ENST00000566339 ZNF335Q9H4Z2 1342 aaPredicted RBP26.58■■□□□ 1.85
SPSB3-208ENST00000566339 TERF1P54274 439 aa26.58■■□□□ 1.85
SPSB3-208ENST00000566339 THUMPD2Q9BTF0 503 aaKnown RBP26.57■■□□□ 1.84
SPSB3-208ENST00000566339 EMILIN1Q9Y6C2 1016 aa26.57■■□□□ 1.84
SPSB3-208ENST00000566339 RGS12O14924 1447 aa26.57■■□□□ 1.84
SPSB3-208ENST00000566339 NALCNQ8IZF0 1738 aa26.56■■□□□ 1.84
SPSB3-208ENST00000566339 RBM42Q9BTD8 480 aaKnown RBP26.56■■□□□ 1.84
SPSB3-208ENST00000566339 ZSCAN30Q86W11 494 aa26.55■■□□□ 1.84
SPSB3-208ENST00000566339 OSBPL3Q9H4L5 887 aa26.55■■□□□ 1.84
SPSB3-208ENST00000566339 LTBP4Q8N2S1 1624 aa26.55■■□□□ 1.84
SPSB3-208ENST00000566339 ERBB4Q15303 1308 aa26.54■■□□□ 1.84
SPSB3-208ENST00000566339 CHL1O00533 1208 aa26.53■■□□□ 1.84
SPSB3-208ENST00000566339 CEP85Q6P2H3 762 aa26.53■■□□□ 1.84
SPSB3-208ENST00000566339 HMMRO75330 724 aa26.53■■□□□ 1.84
SPSB3-208ENST00000566339 MCM2P49736 904 aa26.53■■□□□ 1.84
SPSB3-208ENST00000566339 RTL1A6NKG5 1358 aa26.52■■□□□ 1.84
SPSB3-208ENST00000566339 CCDC61Q9Y6R9 512 aa26.52■■□□□ 1.84
SPSB3-208ENST00000566339 NME9Q86XW9 330 aa26.51■■□□□ 1.83
SPSB3-208ENST00000566339 LMBRD1Q9NUN5 540 aa26.51■■□□□ 1.83
SPSB3-208ENST00000566339 NPHP4O75161 1426 aaPredicted RBP26.5■■□□□ 1.83
SPSB3-208ENST00000566339 NUDT16Q96DE0 195 aaKnown RBP26.5■■□□□ 1.83
SPSB3-208ENST00000566339 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.5■■□□□ 1.83
SPSB3-208ENST00000566339 ELL2O00472 640 aaPredicted RBP26.49■■□□□ 1.83
SPSB3-208ENST00000566339 RGPD1P0DJD0 1748 aa26.49■■□□□ 1.83
SPSB3-208ENST00000566339 ADAMTS13Q76LX8 1427 aa26.49■■□□□ 1.83
SPSB3-208ENST00000566339 ERC2O15083 957 aa26.48■■□□□ 1.83
SPSB3-208ENST00000566339 EPB41L2O43491 1005 aaKnown RBP26.48■■□□□ 1.83
SPSB3-208ENST00000566339 SDSP20132 328 aa26.48■■□□□ 1.83
SPSB3-208ENST00000566339 TXNDC2Q86VQ3 553 aa26.48■■□□□ 1.83
SPSB3-208ENST00000566339 FOXD4L1Q9NU39 408 aa26.48■■□□□ 1.83
SPSB3-208ENST00000566339 TMEM2Q9UHN6 1383 aa26.48■■□□□ 1.83
SPSB3-208ENST00000566339 FBLN1P23142 703 aa26.47■■□□□ 1.83
SPSB3-208ENST00000566339 LTKP29376 864 aa26.47■■□□□ 1.83
SPSB3-208ENST00000566339 ARHGEF10O15013 1369 aa26.47■■□□□ 1.83
SPSB3-208ENST00000566339 HDGFP51858 240 aaKnown RBP26.46■■□□□ 1.83
SPSB3-208ENST00000566339 HSP90AA2PQ14568 343 aaPredicted RBP26.46■■□□□ 1.83
SPSB3-208ENST00000566339 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.46■■□□□ 1.83
SPSB3-208ENST00000566339 IL17RAQ96F46 866 aa26.46■■□□□ 1.83
SPSB3-208ENST00000566339 MCTP1Q6DN14 999 aa26.45■■□□□ 1.82
SPSB3-208ENST00000566339 PDLIM2Q96JY6 352 aa26.45■■□□□ 1.82
SPSB3-208ENST00000566339 OVOS2A0A0J9YW53 1432 aa26.45■■□□□ 1.82
SPSB3-208ENST00000566339 OVOS2Q6IE36 1432 aa26.45■■□□□ 1.82
SPSB3-208ENST00000566339 PRR36Q9H6K5 1346 aa26.45■■□□□ 1.82
SPSB3-208ENST00000566339 OFD1O75665 1012 aa26.44■■□□□ 1.82
SPSB3-208ENST00000566339 MCM5P33992 734 aa26.44■■□□□ 1.82
SPSB3-208ENST00000566339 CCT4P50991 539 aaKnown RBP26.44■■□□□ 1.82
SPSB3-208ENST00000566339 ZSCAN23Q3MJ62 389 aa26.44■■□□□ 1.82
SPSB3-208ENST00000566339 SLIT1O75093 1534 aa26.44■■□□□ 1.82
SPSB3-208ENST00000566339 SSH2Q76I76 1423 aa26.43■■□□□ 1.82
SPSB3-208ENST00000566339 MBD3O95983 291 aa26.43■■□□□ 1.82
SPSB3-208ENST00000566339 EID1Q9Y6B2 187 aa26.43■■□□□ 1.82
SPSB3-208ENST00000566339 ARHGAP23Q9P227 1491 aa26.43■■□□□ 1.82
SPSB3-208ENST00000566339 MSH6P52701 1360 aa26.43■■□□□ 1.82
SPSB3-208ENST00000566339 MSNP26038 577 aaKnown RBP26.43■■□□□ 1.82
SPSB3-208ENST00000566339 ANAPC15P60006 121 aa26.43■■□□□ 1.82
SPSB3-208ENST00000566339 ZRANB1Q9UGI0 708 aa26.43■■□□□ 1.82
SPSB3-208ENST00000566339 TTC21BQ7Z4L5 1316 aa26.42■■□□□ 1.82
SPSB3-208ENST00000566339 ROBO2Q9HCK4 1378 aa26.42■■□□□ 1.82
SPSB3-208ENST00000566339 PEAK1Q9H792 1746 aa26.41■■□□□ 1.82
SPSB3-208ENST00000566339 SOS1Q07889 1333 aaPredicted RBP26.41■■□□□ 1.82
SPSB3-208ENST00000566339 PLEKHG1Q9ULL1 1385 aa26.41■■□□□ 1.82
SPSB3-208ENST00000566339 CRB1P82279 1406 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms