RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ERC2O15083 957 aa14.45□□□□□ -0.1
ABCA3-203ENST00000563623 TPM2P07951 284 aa14.45□□□□□ -0.1
ABCA3-203ENST00000563623 ANKRD44Q8N8A2 993 aa14.45□□□□□ -0.1
ABCA3-203ENST00000563623 RTF1Q92541 710 aaKnown RBP14.44□□□□□ -0.1
ABCA3-203ENST00000563623 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.44□□□□□ -0.1
ABCA3-203ENST00000563623 RPAP2Q8IXW5 612 aaPredicted RBP14.44□□□□□ -0.1
ABCA3-203ENST00000563623 LMBRD1Q9NUN5 540 aa14.44□□□□□ -0.1
ABCA3-203ENST00000563623 KIDINS220Q9ULH0 1771 aa14.44□□□□□ -0.1
ABCA3-203ENST00000563623 ADGRB2O60241 1585 aa14.44□□□□□ -0.1
ABCA3-203ENST00000563623 HAP1P54257 671 aaPredicted RBP14.43□□□□□ -0.1
ABCA3-203ENST00000563623 CEP85Q6P2H3 762 aa14.43□□□□□ -0.1
ABCA3-203ENST00000563623 MCCP23508 829 aa14.43□□□□□ -0.1
ABCA3-203ENST00000563623 CWC22Q9HCG8 908 aaKnown RBP14.43□□□□□ -0.1
ABCA3-203ENST00000563623 NUDT16Q96DE0 195 aaKnown RBP14.42□□□□□ -0.1
ABCA3-203ENST00000563623 ESF1Q9H501 851 aaKnown RBP14.42□□□□□ -0.1
ABCA3-203ENST00000563623 LRRC7Q96NW7 1537 aa14.42□□□□□ -0.1
ABCA3-203ENST00000563623 UPF3BQ9BZI7 483 aaKnown RBP14.42□□□□□ -0.1
ABCA3-203ENST00000563623 GDPD2Q9HCC8 539 aa14.42□□□□□ -0.1
ABCA3-203ENST00000563623 TSPYL4Q9UJ04 414 aa14.42□□□□□ -0.1
ABCA3-203ENST00000563623 ABCA9Q8IUA7 1624 aa14.42□□□□□ -0.1
ABCA3-203ENST00000563623 PPLO60437 1756 aa14.41□□□□□ -0.1
ABCA3-203ENST00000563623 ZFYVE9O95405 1425 aa14.41□□□□□ -0.1
ABCA3-203ENST00000563623 COL3A1P02461 1466 aaPredicted RBP14.41□□□□□ -0.1
ABCA3-203ENST00000563623 BRPF1P55201 1214 aaPredicted RBP14.41□□□□□ -0.1
ABCA3-203ENST00000563623 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
ABCA3-203ENST00000563623 CAMSAP1Q5T5Y3 1602 aa14.41□□□□□ -0.1
ABCA3-203ENST00000563623 IFT172Q9UG01 1749 aa14.41□□□□□ -0.1
ABCA3-203ENST00000563623 POGZQ7Z3K3 1410 aa14.41□□□□□ -0.1
ABCA3-203ENST00000563623 STK31Q9BXU1 1019 aa14.41□□□□□ -0.1
ABCA3-203ENST00000563623 NEURL4Q96JN8 1562 aa14.4□□□□□ -0.1
ABCA3-203ENST00000563623 ABCC3O15438 1527 aa14.4□□□□□ -0.1
ABCA3-203ENST00000563623 ZNF853P0CG23 659 aa14.4□□□□□ -0.1
ABCA3-203ENST00000563623 PPP1R9BQ96SB3 815 aa14.4□□□□□ -0.1
ABCA3-203ENST00000563623 FKBP5Q13451 457 aaPredicted RBP14.4□□□□□ -0.1
ABCA3-203ENST00000563623 MSH6P52701 1360 aa14.4□□□□□ -0.1
ABCA3-203ENST00000563623 PNPLA6Q8IY17 1366 aa14.39□□□□□ -0.11
ABCA3-203ENST00000563623 WASLO00401 505 aaPredicted RBP14.39□□□□□ -0.11
ABCA3-203ENST00000563623 GPT2Q8TD30 523 aa14.39□□□□□ -0.11
ABCA3-203ENST00000563623 MAP4K4O95819 1239 aaPredicted RBP14.39□□□□□ -0.11
ABCA3-203ENST00000563623 G2E3Q7L622 706 aa14.39□□□□□ -0.11
ABCA3-203ENST00000563623 TMX3Q96JJ7 454 aa14.39□□□□□ -0.11
ABCA3-203ENST00000563623 LMTK2Q8IWU2 1503 aa14.39□□□□□ -0.11
ABCA3-203ENST00000563623 PTCH1Q13635 1447 aa14.39□□□□□ -0.11
ABCA3-203ENST00000563623 ZC3H13Q5T200 1668 aaKnown RBP14.39□□□□□ -0.11
ABCA3-203ENST00000563623 RIMS2Q9UQ26 1411 aa14.39□□□□□ -0.11
ABCA3-203ENST00000563623 ZNF445P59923 1031 aa14.38□□□□□ -0.11
ABCA3-203ENST00000563623 BBXQ8WY36 941 aaPredicted RBP14.38□□□□□ -0.11
ABCA3-203ENST00000563623 TMEM63CQ9P1W3 806 aa14.38□□□□□ -0.11
ABCA3-203ENST00000563623 NSFL1CQ9UNZ2 370 aaKnown RBP14.38□□□□□ -0.11
ABCA3-203ENST00000563623 OFD1O75665 1012 aa14.38□□□□□ -0.11
ABCA3-203ENST00000563623 PDE1AP54750 535 aa14.38□□□□□ -0.11
ABCA3-203ENST00000563623 LARP6Q9BRS8 491 aaKnown RBP14.38□□□□□ -0.11
ABCA3-203ENST00000563623 CFAP74Q9C0B2 1584 aa14.38□□□□□ -0.11
ABCA3-203ENST00000563623 USP32Q8NFA0 1604 aa14.38□□□□□ -0.11
ABCA3-203ENST00000563623 IL1RAPL2Q9NP60 686 aa14.38□□□□□ -0.11
ABCA3-203ENST00000563623 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
ABCA3-203ENST00000563623 FOXO3O43524 673 aa14.37□□□□□ -0.11
ABCA3-203ENST00000563623 HSP90AB2PQ58FF8 381 aa14.37□□□□□ -0.11
ABCA3-203ENST00000563623 ARHGEF28Q8N1W1 1705 aaKnown RBP14.37□□□□□ -0.11
ABCA3-203ENST00000563623 EIF4A2Q14240 407 aaKnown RBP14.37□□□□□ -0.11
ABCA3-203ENST00000563623 UQCRHLA0A096LP55 91 aa14.36□□□□□ -0.11
ABCA3-203ENST00000563623 UQCRHP07919 91 aa14.36□□□□□ -0.11
ABCA3-203ENST00000563623 DTNBO60941 627 aa14.36□□□□□ -0.11
ABCA3-203ENST00000563623 LTV1Q96GA3 475 aaPredicted RBP14.36□□□□□ -0.11
ABCA3-203ENST00000563623 GNAI2P04899 355 aa14.36□□□□□ -0.11
ABCA3-203ENST00000563623 SYAP1Q96A49 352 aaPredicted RBP14.36□□□□□ -0.11
ABCA3-203ENST00000563623 MED14O60244 1454 aa14.36□□□□□ -0.11
ABCA3-203ENST00000563623 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
ABCA3-203ENST00000563623 MBD3O95983 291 aa14.35□□□□□ -0.11
ABCA3-203ENST00000563623 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
ABCA3-203ENST00000563623 LRRCC1Q9C099 1032 aa14.35□□□□□ -0.11
ABCA3-203ENST00000563623 TSPY26PQ9H489 355 aa14.35□□□□□ -0.11
ABCA3-203ENST00000563623 ZDHHC9Q9Y397 364 aa14.35□□□□□ -0.11
ABCA3-203ENST00000563623 CD163L1Q9NR16 1453 aa14.35□□□□□ -0.11
ABCA3-203ENST00000563623 RTL1A6NKG5 1358 aa14.34□□□□□ -0.11
ABCA3-203ENST00000563623 C14orf37Q86TY3 774 aa14.34□□□□□ -0.11
ABCA3-203ENST00000563623 CCDC39Q9UFE4 941 aa14.34□□□□□ -0.11
ABCA3-203ENST00000563623 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
ABCA3-203ENST00000563623 PTPRMP28827 1452 aa14.34□□□□□ -0.11
ABCA3-203ENST00000563623 AMPHP49418 695 aa14.34□□□□□ -0.11
ABCA3-203ENST00000563623 PALD1Q9ULE6 856 aa14.34□□□□□ -0.11
ABCA3-203ENST00000563623 MLH3Q9UHC1 1453 aa14.34□□□□□ -0.11
ABCA3-203ENST00000563623 MX1P20591 662 aa14.33□□□□□ -0.11
ABCA3-203ENST00000563623 NUTM1Q86Y26 1132 aa14.33□□□□□ -0.11
ABCA3-203ENST00000563623 OS9Q13438 667 aaPredicted RBP14.33□□□□□ -0.12
ABCA3-203ENST00000563623 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
ABCA3-203ENST00000563623 PDCL3Q9H2J4 239 aa14.33□□□□□ -0.12
ABCA3-203ENST00000563623 ESYT1Q9BSJ8 1104 aa14.33□□□□□ -0.12
ABCA3-203ENST00000563623 YEATS2Q9ULM3 1422 aa14.33□□□□□ -0.12
ABCA3-203ENST00000563623 CHL1O00533 1208 aa14.32□□□□□ -0.12
ABCA3-203ENST00000563623 CCT4P50991 539 aaKnown RBP14.32□□□□□ -0.12
ABCA3-203ENST00000563623 ZNF830Q96NB3 372 aaPredicted RBP14.32□□□□□ -0.12
ABCA3-203ENST00000563623 CLEC17AQ6ZS10 378 aa14.32□□□□□ -0.12
ABCA3-203ENST00000563623 ZHX1Q9UKY1 873 aaPredicted RBP14.32□□□□□ -0.12
ABCA3-203ENST00000563623 PTPRCP08575 1304 aa14.32□□□□□ -0.12
ABCA3-203ENST00000563623 CYP2E1P05181 493 aaPredicted RBP14.32□□□□□ -0.12
ABCA3-203ENST00000563623 NUTM2GQ5VZR2 741 aa14.32□□□□□ -0.12
ABCA3-203ENST00000563623 NOL7Q9UMY1 257 aaKnown RBP14.32□□□□□ -0.12
ABCA3-203ENST00000563623 ZKSCAN5Q9Y2L8 839 aa14.32□□□□□ -0.12
ABCA3-203ENST00000563623 KIAA2012Q0VF49 1180 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms