RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 HSP90AB2PQ58FF8 381 aa13.62□□□□□ -0.23
NEIL1-202ENST00000561643 SNX21Q969T3 373 aa13.62□□□□□ -0.23
NEIL1-202ENST00000561643 ARID3AQ99856 593 aa13.62□□□□□ -0.23
NEIL1-202ENST00000561643 CHL1O00533 1208 aa13.61□□□□□ -0.23
NEIL1-202ENST00000561643 KIF24Q5T7B8 1368 aa13.61□□□□□ -0.23
NEIL1-202ENST00000561643 ADAMTS13Q76LX8 1427 aa13.61□□□□□ -0.23
NEIL1-202ENST00000561643 KIF13AQ9H1H9 1805 aa13.6□□□□□ -0.23
NEIL1-202ENST00000561643 PLEKHG3A1L390 1219 aa13.6□□□□□ -0.23
NEIL1-202ENST00000561643 CDC45O75419 566 aa13.6□□□□□ -0.23
NEIL1-202ENST00000561643 INTS3Q68E01 1043 aaKnown RBP13.6□□□□□ -0.23
NEIL1-202ENST00000561643 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
NEIL1-202ENST00000561643 OVOS2A0A0J9YW53 1432 aa13.6□□□□□ -0.23
NEIL1-202ENST00000561643 OVOS2Q6IE36 1432 aa13.6□□□□□ -0.23
NEIL1-202ENST00000561643 LTKP29376 864 aa13.59□□□□□ -0.23
NEIL1-202ENST00000561643 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
NEIL1-202ENST00000561643 USP6P35125 1406 aa13.59□□□□□ -0.23
NEIL1-202ENST00000561643 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
NEIL1-202ENST00000561643 TRAK2O60296 914 aa13.58□□□□□ -0.24
NEIL1-202ENST00000561643 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
NEIL1-202ENST00000561643 KIF2CQ99661 725 aa13.58□□□□□ -0.24
NEIL1-202ENST00000561643 NCOA3Q9Y6Q9 1424 aa13.58□□□□□ -0.24
NEIL1-202ENST00000561643 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
NEIL1-202ENST00000561643 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
NEIL1-202ENST00000561643 GSPT1P15170 499 aaKnown RBP13.58□□□□□ -0.24
NEIL1-202ENST00000561643 ANKRD44Q8N8A2 993 aa13.58□□□□□ -0.24
NEIL1-202ENST00000561643 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
NEIL1-202ENST00000561643 PLEKHG1Q9ULL1 1385 aa13.57□□□□□ -0.24
NEIL1-202ENST00000561643 ERBB4Q15303 1308 aa13.57□□□□□ -0.24
NEIL1-202ENST00000561643 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
NEIL1-202ENST00000561643 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
NEIL1-202ENST00000561643 UBR1Q8IWV7 1749 aa13.57□□□□□ -0.24
NEIL1-202ENST00000561643 APBB1O00213 710 aa13.57□□□□□ -0.24
NEIL1-202ENST00000561643 RPAP2Q8IXW5 612 aaPredicted RBP13.57□□□□□ -0.24
NEIL1-202ENST00000561643 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
NEIL1-202ENST00000561643 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.57□□□□□ -0.24
NEIL1-202ENST00000561643 PTPRCP08575 1304 aa13.57□□□□□ -0.24
NEIL1-202ENST00000561643 EID1Q9Y6B2 187 aa13.56□□□□□ -0.24
NEIL1-202ENST00000561643 MSH6P52701 1360 aa13.56□□□□□ -0.24
NEIL1-202ENST00000561643 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
NEIL1-202ENST00000561643 CEP85Q6P2H3 762 aa13.56□□□□□ -0.24
NEIL1-202ENST00000561643 C16orf71Q8IYS4 520 aaPredicted RBP13.56□□□□□ -0.24
NEIL1-202ENST00000561643 RBM42Q9BTD8 480 aaKnown RBP13.56□□□□□ -0.24
NEIL1-202ENST00000561643 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
NEIL1-202ENST00000561643 ESPNB1AK53 854 aa13.56□□□□□ -0.24
NEIL1-202ENST00000561643 DDIT3P35638 169 aa13.56□□□□□ -0.24
NEIL1-202ENST00000561643 TTC22Q5TAA0 569 aa13.56□□□□□ -0.24
NEIL1-202ENST00000561643 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
NEIL1-202ENST00000561643 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
NEIL1-202ENST00000561643 RGS12O14924 1447 aa13.55□□□□□ -0.24
NEIL1-202ENST00000561643 K7ELQ4 463 aaPredicted RBP13.55□□□□□ -0.24
NEIL1-202ENST00000561643 FOXO3O43524 673 aa13.55□□□□□ -0.24
NEIL1-202ENST00000561643 CD2BP2O95400 341 aaKnown RBP13.55□□□□□ -0.24
NEIL1-202ENST00000561643 MEIS3Q99687 375 aa13.55□□□□□ -0.24
NEIL1-202ENST00000561643 TSPYL4Q9UJ04 414 aa13.55□□□□□ -0.24
NEIL1-202ENST00000561643 USP31Q70CQ4 1352 aa13.55□□□□□ -0.24
NEIL1-202ENST00000561643 AMOTL2Q9Y2J4 779 aa13.55□□□□□ -0.24
NEIL1-202ENST00000561643 ATP10DQ9P241 1426 aa13.55□□□□□ -0.24
NEIL1-202ENST00000561643 TNPO1Q92973 898 aaKnown RBP13.54□□□□□ -0.24
NEIL1-202ENST00000561643 AMPHP49418 695 aa13.54□□□□□ -0.24
NEIL1-202ENST00000561643 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
NEIL1-202ENST00000561643 SLC4A10Q6U841 1118 aa13.54□□□□□ -0.24
NEIL1-202ENST00000561643 RTL1A6NKG5 1358 aa13.54□□□□□ -0.24
NEIL1-202ENST00000561643 ARHGEF10O15013 1369 aa13.54□□□□□ -0.24
NEIL1-202ENST00000561643 OTUD7AQ8TE49 926 aaPredicted RBP13.54□□□□□ -0.24
NEIL1-202ENST00000561643 GBP4Q96PP9 640 aa13.54□□□□□ -0.24
NEIL1-202ENST00000561643 PEAK1Q9H792 1746 aa13.54□□□□□ -0.24
NEIL1-202ENST00000561643 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
NEIL1-202ENST00000561643 CRB1P82279 1406 aa13.53□□□□□ -0.24
NEIL1-202ENST00000561643 PTPRUQ92729 1446 aa13.53□□□□□ -0.24
NEIL1-202ENST00000561643 SMARCA5O60264 1052 aaPredicted RBP13.53□□□□□ -0.24
NEIL1-202ENST00000561643 TOPAZ1Q8N9V7 1692 aa13.53□□□□□ -0.24
NEIL1-202ENST00000561643 FLT4P35916 1363 aa13.53□□□□□ -0.24
NEIL1-202ENST00000561643 HMMRO75330 724 aa13.52□□□□□ -0.25
NEIL1-202ENST00000561643 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.25
NEIL1-202ENST00000561643 CASC1Q6TDU7 716 aa13.52□□□□□ -0.25
NEIL1-202ENST00000561643 SBNO1A3KN83 1393 aa13.52□□□□□ -0.25
NEIL1-202ENST00000561643 F6X3S4 739 aa13.51□□□□□ -0.25
NEIL1-202ENST00000561643 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
NEIL1-202ENST00000561643 MRE11P49959 708 aa13.51□□□□□ -0.25
NEIL1-202ENST00000561643 G2E3Q7L622 706 aa13.51□□□□□ -0.25
NEIL1-202ENST00000561643 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
NEIL1-202ENST00000561643 PDCL3Q9H2J4 239 aa13.51□□□□□ -0.25
NEIL1-202ENST00000561643 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-202ENST00000561643 EYA1Q99502 592 aa13.51□□□□□ -0.25
NEIL1-202ENST00000561643 SDSP20132 328 aa13.5□□□□□ -0.25
NEIL1-202ENST00000561643 RABEP1Q15276 862 aa13.5□□□□□ -0.25
NEIL1-202ENST00000561643 NALCNQ8IZF0 1738 aa13.5□□□□□ -0.25
NEIL1-202ENST00000561643 STK31Q9BXU1 1019 aa13.5□□□□□ -0.25
NEIL1-202ENST00000561643 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
NEIL1-202ENST00000561643 CCT4P50991 539 aaKnown RBP13.5□□□□□ -0.25
NEIL1-202ENST00000561643 PAXIP1Q6ZW49 1069 aaPredicted RBP13.5□□□□□ -0.25
NEIL1-202ENST00000561643 GRPEL1Q9HAV7 217 aa13.5□□□□□ -0.25
NEIL1-202ENST00000561643 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
NEIL1-202ENST00000561643 NLRP6P59044 892 aa13.49□□□□□ -0.25
NEIL1-202ENST00000561643 USP26Q9BXU7 913 aa13.49□□□□□ -0.25
NEIL1-202ENST00000561643 TBX22Q9Y458 520 aa13.49□□□□□ -0.25
NEIL1-202ENST00000561643 IGSF1Q8N6C5 1336 aa13.48□□□□□ -0.25
NEIL1-202ENST00000561643 TPM2P07951 284 aa13.48□□□□□ -0.25
NEIL1-202ENST00000561643 ZHX1Q9UKY1 873 aaPredicted RBP13.48□□□□□ -0.25
NEIL1-202ENST00000561643 KDRP35968 1356 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms