RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 TWISTNBQ3B726 338 aaPredicted RBP6.32□□□□□ -1.4
LRRC49-221ENST00000560107 TTC22Q5TAA0 569 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 HDGFL2Q7Z4V5 671 aaPredicted RBP6.32□□□□□ -1.4
LRRC49-221ENST00000560107 ZGPATQ8N5A5 531 aaKnown RBP6.32□□□□□ -1.4
LRRC49-221ENST00000560107 OTUD7AQ8TE49 926 aaPredicted RBP6.32□□□□□ -1.4
LRRC49-221ENST00000560107 PIK3C2BO00750 1634 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 PTPRMP28827 1452 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 ASXL2Q76L83 1435 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 IDI1Q13907 227 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 GPT2Q8TD30 523 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 CDK19Q9BWU1 502 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 DCTPP1Q9H773 170 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 IFT57Q9NWB7 429 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 CDC42BPGQ6DT37 1551 aa6.31□□□□□ -1.4
LRRC49-221ENST00000560107 KIF20BQ96Q89 1820 aa6.31□□□□□ -1.4
LRRC49-221ENST00000560107 APBB1O00213 710 aa6.31□□□□□ -1.4
LRRC49-221ENST00000560107 ZNF853P0CG23 659 aa6.31□□□□□ -1.4
LRRC49-221ENST00000560107 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.31□□□□□ -1.4
LRRC49-221ENST00000560107 PRDM10Q9NQV6 1147 aa6.31□□□□□ -1.4
LRRC49-221ENST00000560107 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.31□□□□□ -1.4
LRRC49-221ENST00000560107 R3HCC1Q9Y3T6 440 aaKnown RBP6.31□□□□□ -1.4
LRRC49-221ENST00000560107 REREQ9P2R6 1566 aa6.31□□□□□ -1.4
LRRC49-221ENST00000560107 ZFYVE9O95405 1425 aa6.31□□□□□ -1.4
LRRC49-221ENST00000560107 SMARCA5O60264 1052 aaPredicted RBP6.31□□□□□ -1.4
LRRC49-221ENST00000560107 HOXD11P31277 338 aaPredicted RBP6.31□□□□□ -1.4
LRRC49-221ENST00000560107 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
LRRC49-221ENST00000560107 API5Q9BZZ5 524 aaKnown RBP6.31□□□□□ -1.4
LRRC49-221ENST00000560107 NOL7Q9UMY1 257 aaKnown RBP6.31□□□□□ -1.4
LRRC49-221ENST00000560107 ZDHHC9Q9Y397 364 aa6.31□□□□□ -1.4
LRRC49-221ENST00000560107 EMILIN1Q9Y6C2 1016 aa6.31□□□□□ -1.4
LRRC49-221ENST00000560107 FAM83GA6ND36 823 aa6.3□□□□□ -1.4
LRRC49-221ENST00000560107 SDSP20132 328 aa6.3□□□□□ -1.4
LRRC49-221ENST00000560107 XPCQ01831 940 aaPredicted RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 DCTN1Q14203 1278 aa6.3□□□□□ -1.4
LRRC49-221ENST00000560107 FOXD4L5Q5VV16 416 aaPredicted RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 PPP4R3CPQ6ZMV5 832 aa6.3□□□□□ -1.4
LRRC49-221ENST00000560107 CNPY4Q8N129 248 aa6.3□□□□□ -1.4
LRRC49-221ENST00000560107 IPO4Q8TEX9 1081 aaKnown RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 FOXD4L4Q8WXT5 416 aaPredicted RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 SECISBP2LQ93073 1101 aaKnown RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 PDLIM2Q96JY6 352 aa6.3□□□□□ -1.4
LRRC49-221ENST00000560107 NSFL1CQ9UNZ2 370 aaKnown RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 MAP2P11137 1827 aaKnown RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 YTHDC2Q9H6S0 1430 aaKnown RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 HS1BP3Q53T59 392 aa6.3□□□□□ -1.4
LRRC49-221ENST00000560107 BBXQ8WY36 941 aaPredicted RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 CWC22Q9HCG8 908 aaKnown RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 TMEM63CQ9P1W3 806 aa6.3□□□□□ -1.4
LRRC49-221ENST00000560107 CLTCQ00610 1675 aaKnown RBP6.3□□□□□ -1.4
LRRC49-221ENST00000560107 MYO5BQ9ULV0 1848 aa6.3□□□□□ -1.4
LRRC49-221ENST00000560107 ST18O60284 1047 aa6.29□□□□□ -1.4
LRRC49-221ENST00000560107 ZNF500O60304 480 aaPredicted RBP6.29□□□□□ -1.4
LRRC49-221ENST00000560107 ANKRD44Q8N8A2 993 aa6.29□□□□□ -1.4
LRRC49-221ENST00000560107 FAM13BQ9NYF5 915 aa6.29□□□□□ -1.4
LRRC49-221ENST00000560107 POGZQ7Z3K3 1410 aa6.29□□□□□ -1.4
LRRC49-221ENST00000560107 MLH3Q9UHC1 1453 aa6.29□□□□□ -1.4
LRRC49-221ENST00000560107 SYCE3A1L190 88 aa6.29□□□□□ -1.4
LRRC49-221ENST00000560107 IL13P35225 146 aa6.29□□□□□ -1.4
LRRC49-221ENST00000560107 ATP10DQ9P241 1426 aa6.29□□□□□ -1.4
LRRC49-221ENST00000560107 DLG5Q8TDM6 1919 aa6.29□□□□□ -1.4
LRRC49-221ENST00000560107 TERF1P54274 439 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 KRT24Q2M2I5 525 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 CEP85Q6P2H3 762 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 CASC1Q6TDU7 716 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 LRSAM1Q6UWE0 723 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 TEX2Q8IWB9 1127 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 ZRANB1Q9UGI0 708 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 YEATS2Q9ULM3 1422 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.28□□□□□ -1.4
LRRC49-221ENST00000560107 RNF214Q8ND24 703 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 ZKSCAN5Q9Y2L8 839 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 ARHGEF40Q8TER5 1519 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 KIF24Q5T7B8 1368 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 RIMS2Q9UQ26 1411 aa6.28□□□□□ -1.4
LRRC49-221ENST00000560107 UQCRHLA0A096LP55 91 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 RAPGEF3O95398 923 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 UQCRHP07919 91 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 HMGB1P09429 215 aaKnown RBP6.27□□□□□ -1.41
LRRC49-221ENST00000560107 WAPLQ7Z5K2 1190 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 RPAP2Q8IXW5 612 aaPredicted RBP6.27□□□□□ -1.41
LRRC49-221ENST00000560107 ERC2O15083 957 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 REC8O95072 547 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 TICAM2Q86XR7 235 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 NME9Q86XW9 330 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 ZNF592Q92610 1267 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 MEIS3Q99687 375 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 RTL1A6NKG5 1358 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 RGS12O14924 1447 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 CHRM1P11229 460 aaPredicted RBP6.27□□□□□ -1.41
LRRC49-221ENST00000560107 NEK4P51957 841 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 LMOD3Q0VAK6 560 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 RRS1Q15050 365 aaKnown RBP6.27□□□□□ -1.41
LRRC49-221ENST00000560107 TMX3Q96JJ7 454 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 SLC52A1Q9NWF4 448 aa6.27□□□□□ -1.41
LRRC49-221ENST00000560107 MSH6P52701 1360 aa6.26□□□□□ -1.41
LRRC49-221ENST00000560107 TMED8Q6PL24 325 aaPredicted RBP6.26□□□□□ -1.41
LRRC49-221ENST00000560107 NOL8Q76FK4 1167 aaKnown RBP6.26□□□□□ -1.41
LRRC49-221ENST00000560107 ARID3AQ99856 593 aa6.26□□□□□ -1.41
LRRC49-221ENST00000560107 CCDC39Q9UFE4 941 aa6.26□□□□□ -1.41
LRRC49-221ENST00000560107 TMEM131LA2VDJ0 1609 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms