RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
CARMIL3-202ENST00000559694 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
CARMIL3-202ENST00000559694 PARD3Q8TEW0 1356 aa13.05□□□□□ -0.32
CARMIL3-202ENST00000559694 A2ML1A8K2U0 1454 aa13.04□□□□□ -0.32
CARMIL3-202ENST00000559694 TET3O43151 1660 aa13.04□□□□□ -0.32
CARMIL3-202ENST00000559694 ARID3AQ99856 593 aa13.04□□□□□ -0.32
CARMIL3-202ENST00000559694 CLASRPQ8N2M8 674 aaKnown RBP13.04□□□□□ -0.32
CARMIL3-202ENST00000559694 ANXA1P04083 346 aa13.04□□□□□ -0.32
CARMIL3-202ENST00000559694 DIAPH3Q9NSV4 1193 aa13.04□□□□□ -0.32
CARMIL3-202ENST00000559694 ZPR1O75312 459 aa13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 AKAP4Q5JQC9 854 aa13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 DBF4Q9UBU7 674 aaPredicted RBP13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 F6X3S4 739 aa13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 GBP4Q96PP9 640 aa13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 SIL1Q9H173 461 aa13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 CNNM1Q9NRU3 951 aa13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 ARHGEF10O15013 1369 aa13.03□□□□□ -0.32
CARMIL3-202ENST00000559694 RARSP54136 660 aaKnown RBP13.02□□□□□ -0.32
CARMIL3-202ENST00000559694 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.32
CARMIL3-202ENST00000559694 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
CARMIL3-202ENST00000559694 PIK3C2GO75747 1445 aa13.02□□□□□ -0.33
CARMIL3-202ENST00000559694 ZBTB3Q9H5J0 574 aa13.02□□□□□ -0.33
CARMIL3-202ENST00000559694 AAMPQ13685 434 aa13.02□□□□□ -0.33
CARMIL3-202ENST00000559694 PRR36Q9H6K5 1346 aa13.01□□□□□ -0.33
CARMIL3-202ENST00000559694 POLR1AO95602 1720 aaPredicted RBP13.01□□□□□ -0.33
CARMIL3-202ENST00000559694 DIP2BQ9P265 1576 aa13.01□□□□□ -0.33
CARMIL3-202ENST00000559694 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
CARMIL3-202ENST00000559694 SNRPA1P09661 255 aaKnown RBP13.01□□□□□ -0.33
CARMIL3-202ENST00000559694 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
CARMIL3-202ENST00000559694 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
CARMIL3-202ENST00000559694 LRRFIP1Q32MZ4 808 aaKnown RBP13.01□□□□□ -0.33
CARMIL3-202ENST00000559694 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
CARMIL3-202ENST00000559694 SBNO2Q9Y2G9 1366 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 CCDC57Q2TAC2 916 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 MPHOSPH8Q99549 860 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 TRPM1Q7Z4N2 1603 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 SRGAP3O43295 1099 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 APPP05067 770 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 MVPQ14764 893 aaKnown RBP13□□□□□ -0.33
CARMIL3-202ENST00000559694 FAM98CQ17RN3 349 aaKnown RBP13□□□□□ -0.33
CARMIL3-202ENST00000559694 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 NOL8Q76FK4 1167 aaKnown RBP13□□□□□ -0.33
CARMIL3-202ENST00000559694 NBPF4Q96M43 638 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 MYD88Q99836 296 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
CARMIL3-202ENST00000559694 BACH2Q9BYV9 841 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 PIK3R4Q99570 1358 aa13□□□□□ -0.33
CARMIL3-202ENST00000559694 GPTP24298 496 aa12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 NOL10Q9BSC4 688 aaKnown RBP12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 USP21Q9UK80 565 aa12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 IL13P35225 146 aa12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 MYOM2P54296 1465 aa12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 SBNO1A3KN83 1393 aa12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 DIP2CQ9Y2E4 1556 aa12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 ERC2O15083 957 aa12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 AK7Q96M32 723 aa12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 HYPKQ9NX55 129 aa12.99□□□□□ -0.33
CARMIL3-202ENST00000559694 FLIIQ13045 1269 aa12.98□□□□□ -0.33
CARMIL3-202ENST00000559694 INO80Q9ULG1 1556 aaPredicted RBP12.98□□□□□ -0.33
CARMIL3-202ENST00000559694 PHF14O94880 888 aa12.98□□□□□ -0.33
CARMIL3-202ENST00000559694 ALDH1L2Q3SY69 923 aa12.98□□□□□ -0.33
CARMIL3-202ENST00000559694 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 RUFY2Q8WXA3 655 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 LAMC1P11047 1609 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 SPHKAPQ2M3C7 1700 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 PIP4K2AP48426 406 aaPredicted RBP12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 DNAAF4Q8WXU2 420 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 ATP5J2-PTCD1G3V325 749 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 GLI2P10070 1586 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 PI4KAP2A4QPH2 592 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 PI4KAP1Q8N8J0 262 aa12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 TRMT112Q9UI30 125 aaKnown RBP12.97□□□□□ -0.33
CARMIL3-202ENST00000559694 HTATSF1O43719 755 aaKnown RBP12.96□□□□□ -0.33
CARMIL3-202ENST00000559694 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
CARMIL3-202ENST00000559694 BCORL1Q5H9F3 1711 aa12.96□□□□□ -0.34
CARMIL3-202ENST00000559694 CCDC27Q2M243 656 aa12.96□□□□□ -0.34
CARMIL3-202ENST00000559694 WASHC4Q2M389 1173 aa12.96□□□□□ -0.34
CARMIL3-202ENST00000559694 C8orf58Q8NAV2 365 aa12.96□□□□□ -0.34
CARMIL3-202ENST00000559694 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.34
CARMIL3-202ENST00000559694 NPC1L1Q9UHC9 1359 aa12.95□□□□□ -0.34
CARMIL3-202ENST00000559694 A0A087WZG4 1122 aa12.95□□□□□ -0.34
CARMIL3-202ENST00000559694 CEP126Q9P2H0 1117 aa12.95□□□□□ -0.34
CARMIL3-202ENST00000559694 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
CARMIL3-202ENST00000559694 IL16Q14005 1332 aa12.95□□□□□ -0.34
CARMIL3-202ENST00000559694 KIF1BO60333 1816 aa12.95□□□□□ -0.34
CARMIL3-202ENST00000559694 ANO2Q9NQ90 1003 aa12.95□□□□□ -0.34
CARMIL3-202ENST00000559694 MAP3K4Q9Y6R4 1608 aa12.95□□□□□ -0.34
CARMIL3-202ENST00000559694 E9PCH4 1651 aa12.95□□□□□ -0.34
CARMIL3-202ENST00000559694 RFC4P35249 363 aa12.94□□□□□ -0.34
CARMIL3-202ENST00000559694 C20orf194Q5TEA3 1177 aa12.94□□□□□ -0.34
CARMIL3-202ENST00000559694 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
CARMIL3-202ENST00000559694 GNL2Q13823 731 aaKnown RBP12.94□□□□□ -0.34
CARMIL3-202ENST00000559694 DNAJC2Q99543 621 aaKnown RBP12.94□□□□□ -0.34
CARMIL3-202ENST00000559694 RNF17Q9BXT8 1623 aaKnown RBP12.94□□□□□ -0.34
CARMIL3-202ENST00000559694 RNMTO43148 476 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms