RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 SLC5A1P13866 664 aa14.16□□□□□ -0.14
NEK9-210ENST00000557026 EXOSC9Q06265 439 aaKnown RBP14.16□□□□□ -0.14
NEK9-210ENST00000557026 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
NEK9-210ENST00000557026 ZRSR2Q15696 482 aaKnown RBP14.15□□□□□ -0.14
NEK9-210ENST00000557026 NBPF8Q3BBV2 869 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 NBPF14Q5TI25 921 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 IFNL2Q8IZJ0 200 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 RAB34Q9BZG1 259 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 RAI14Q9P0K7 980 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 CAMSAP2Q08AD1 1489 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 LNPKQ9C0E8 428 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 LRP2BPQ9P2M1 347 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
NEK9-210ENST00000557026 ERLIN2O94905 339 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 STK38Q15208 465 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 HSP90AB2PQ58FF8 381 aa14.15□□□□□ -0.14
NEK9-210ENST00000557026 THOC2Q8NI27 1593 aaKnown RBP14.15□□□□□ -0.14
NEK9-210ENST00000557026 TDO2P48775 406 aa14.14□□□□□ -0.15
NEK9-210ENST00000557026 DCTN1Q14203 1278 aa14.14□□□□□ -0.15
NEK9-210ENST00000557026 TEX35Q5T0J7 233 aa14.14□□□□□ -0.15
NEK9-210ENST00000557026 HMGB1P09429 215 aaKnown RBP14.14□□□□□ -0.15
NEK9-210ENST00000557026 HOMER1Q86YM7 354 aa14.14□□□□□ -0.15
NEK9-210ENST00000557026 SLC12A5Q9H2X9 1139 aa14.14□□□□□ -0.15
NEK9-210ENST00000557026 ADAMTS8Q9UP79 889 aa14.14□□□□□ -0.15
NEK9-210ENST00000557026 B4DLN1 442 aa14.14□□□□□ -0.15
NEK9-210ENST00000557026 MRPL12P52815 198 aaKnown RBP14.14□□□□□ -0.15
NEK9-210ENST00000557026 TTF1Q15361 905 aaPredicted RBP14.14□□□□□ -0.15
NEK9-210ENST00000557026 GSTO1P78417 241 aa14.14□□□□□ -0.15
NEK9-210ENST00000557026 IMMTQ16891 758 aaKnown RBP14.14□□□□□ -0.15
NEK9-210ENST00000557026 FAM177BA6PVY3 158 aa14.13□□□□□ -0.15
NEK9-210ENST00000557026 MAP3K12Q12852 859 aa14.13□□□□□ -0.15
NEK9-210ENST00000557026 NAP1L1P55209 391 aaKnown RBP14.13□□□□□ -0.15
NEK9-210ENST00000557026 ST5P78524 1137 aa14.13□□□□□ -0.15
NEK9-210ENST00000557026 KIF1BPQ96EK5 621 aa14.13□□□□□ -0.15
NEK9-210ENST00000557026 UHRF1BP1LA0JNW5 1464 aa14.13□□□□□ -0.15
NEK9-210ENST00000557026 ZGPATQ8N5A5 531 aaKnown RBP14.13□□□□□ -0.15
NEK9-210ENST00000557026 CCDC12Q8WUD4 166 aaPredicted RBP14.13□□□□□ -0.15
NEK9-210ENST00000557026 CUL5Q93034 780 aa14.13□□□□□ -0.15
NEK9-210ENST00000557026 PYM1Q9BRP8 204 aaKnown RBP14.13□□□□□ -0.15
NEK9-210ENST00000557026 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 MYO1BO43795 1136 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 PDE4CQ08493 712 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 KRT28Q7Z3Y7 464 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 CRACR2BQ8N4Y2 399 aaPredicted RBP14.12□□□□□ -0.15
NEK9-210ENST00000557026 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
NEK9-210ENST00000557026 CBFA2T2O43439 604 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 ZNF76P36508 570 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 CETN2P41208 172 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 SEC63Q9UGP8 760 aaKnown RBP14.12□□□□□ -0.15
NEK9-210ENST00000557026 AIDAQ96BJ3 306 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 PDCL3Q9H2J4 239 aa14.12□□□□□ -0.15
NEK9-210ENST00000557026 ANKRD18BA2A2Z9 1011 aa14.11□□□□□ -0.15
NEK9-210ENST00000557026 GLRX3O76003 335 aaKnown RBP14.11□□□□□ -0.15
NEK9-210ENST00000557026 ATP2B2Q01814 1243 aa14.11□□□□□ -0.15
NEK9-210ENST00000557026 ZFYVE27Q5T4F4 411 aa14.11□□□□□ -0.15
NEK9-210ENST00000557026 DBF4Q9UBU7 674 aaPredicted RBP14.11□□□□□ -0.15
NEK9-210ENST00000557026 CFAP45Q9UL16 551 aa14.11□□□□□ -0.15
NEK9-210ENST00000557026 RRP12Q5JTH9 1297 aaKnown RBP14.11□□□□□ -0.15
NEK9-210ENST00000557026 METTL24Q5JXM2 366 aa14.11□□□□□ -0.15
NEK9-210ENST00000557026 ARHGEF11O15085 1522 aa14.11□□□□□ -0.15
NEK9-210ENST00000557026 WDR33Q9C0J8 1336 aaKnown RBP14.11□□□□□ -0.15
NEK9-210ENST00000557026 BAG3O95817 575 aa14.11□□□□□ -0.15
NEK9-210ENST00000557026 IFIT5Q13325 482 aaKnown RBP14.11□□□□□ -0.15
NEK9-210ENST00000557026 HDAC9Q9UKV0 1011 aa14.11□□□□□ -0.15
NEK9-210ENST00000557026 BLOC1S2Q6QNY1 142 aa14.1□□□□□ -0.15
NEK9-210ENST00000557026 ZNF518AQ6AHZ1 1483 aa14.1□□□□□ -0.15
NEK9-210ENST00000557026 TNNT3P45378 269 aaPredicted RBP14.1□□□□□ -0.15
NEK9-210ENST00000557026 NSD3Q9BZ95 1437 aa14.1□□□□□ -0.15
NEK9-210ENST00000557026 FGFR1OPO95684 399 aaKnown RBP14.1□□□□□ -0.15
NEK9-210ENST00000557026 POLD1P28340 1107 aa14.1□□□□□ -0.15
NEK9-210ENST00000557026 ZC3H6P61129 1189 aaKnown RBP14.1□□□□□ -0.15
NEK9-210ENST00000557026 PTPRCP08575 1304 aa14.09□□□□□ -0.15
NEK9-210ENST00000557026 CCAR2Q8N163 923 aaKnown RBP14.09□□□□□ -0.15
NEK9-210ENST00000557026 SOS1Q07889 1333 aaPredicted RBP14.09□□□□□ -0.15
NEK9-210ENST00000557026 MNS1Q8NEH6 495 aa14.09□□□□□ -0.15
NEK9-210ENST00000557026 DDX46Q7L014 1031 aaKnown RBP14.09□□□□□ -0.15
NEK9-210ENST00000557026 DZIP1Q86YF9 867 aaKnown RBP14.09□□□□□ -0.15
NEK9-210ENST00000557026 ANKRD36BQ8N2N9 1353 aa14.09□□□□□ -0.15
NEK9-210ENST00000557026 HLA-DOAP06340 250 aa14.09□□□□□ -0.15
NEK9-210ENST00000557026 USP5P45974 858 aa14.09□□□□□ -0.15
NEK9-210ENST00000557026 SRGAP3O43295 1099 aa14.08□□□□□ -0.16
NEK9-210ENST00000557026 UQCRFS1P1P0C7P4 283 aa14.08□□□□□ -0.16
NEK9-210ENST00000557026 AACSQ86V21 672 aa14.08□□□□□ -0.16
NEK9-210ENST00000557026 CABP5Q9NP86 173 aa14.08□□□□□ -0.16
NEK9-210ENST00000557026 SCAF11Q99590 1463 aaKnown RBP14.08□□□□□ -0.16
NEK9-210ENST00000557026 HSP90B2PQ58FF3 399 aa14.08□□□□□ -0.16
NEK9-210ENST00000557026 CAVIN1Q6NZI2 390 aaKnown RBP14.08□□□□□ -0.16
NEK9-210ENST00000557026 DHX37Q8IY37 1157 aaKnown RBP14.08□□□□□ -0.16
NEK9-210ENST00000557026 POLR3DP05423 398 aaPredicted RBP14.08□□□□□ -0.16
NEK9-210ENST00000557026 FOXD4L5Q5VV16 416 aaPredicted RBP14.08□□□□□ -0.16
NEK9-210ENST00000557026 IQCA1Q86XH1 822 aa14.08□□□□□ -0.16
NEK9-210ENST00000557026 FOXD4L4Q8WXT5 416 aaPredicted RBP14.08□□□□□ -0.16
NEK9-210ENST00000557026 LRRC27Q9C0I9 530 aa14.08□□□□□ -0.16
NEK9-210ENST00000557026 NYXQ9GZU5 481 aa14.08□□□□□ -0.16
NEK9-210ENST00000557026 MVPQ14764 893 aaKnown RBP14.07□□□□□ -0.16
NEK9-210ENST00000557026 NF2P35240 595 aa14.07□□□□□ -0.16
NEK9-210ENST00000557026 DEKP35659 375 aaKnown RBP14.07□□□□□ -0.16
NEK9-210ENST00000557026 KRT85P78386 507 aa14.07□□□□□ -0.16
NEK9-210ENST00000557026 MYL6BP14649 208 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms