RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 USP35Q9P2H5 1018 aa15.18■□□□□ 0.02
LETMD1-223ENST00000550442 RGPD3A6NKT7 1758 aaPredicted RBP15.18■□□□□ 0.02
LETMD1-223ENST00000550442 RGPD4Q7Z3J3 1758 aa15.18■□□□□ 0.02
LETMD1-223ENST00000550442 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
LETMD1-223ENST00000550442 SAFB2Q14151 953 aaKnown RBP eCLIP15.17■□□□□ 0.02
LETMD1-223ENST00000550442 NUDT16Q96DE0 195 aaKnown RBP15.17■□□□□ 0.02
LETMD1-223ENST00000550442 SYT17Q9BSW7 474 aa15.17■□□□□ 0.02
LETMD1-223ENST00000550442 FHDC1Q9C0D6 1143 aaPredicted RBP15.17■□□□□ 0.02
LETMD1-223ENST00000550442 PPIP5K1Q6PFW1 1433 aa15.17■□□□□ 0.02
LETMD1-223ENST00000550442 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
LETMD1-223ENST00000550442 TMPOP42166 694 aaKnown RBP15.16■□□□□ 0.02
LETMD1-223ENST00000550442 BRPF1P55201 1214 aaPredicted RBP15.16■□□□□ 0.02
LETMD1-223ENST00000550442 BARGINQ6ZT62 677 aa15.16■□□□□ 0.02
LETMD1-223ENST00000550442 CRYBG1Q9Y4K1 1723 aa15.15■□□□□ 0.02
LETMD1-223ENST00000550442 IPO8O15397 1037 aaKnown RBP15.15■□□□□ 0.02
LETMD1-223ENST00000550442 PTGER2P43116 358 aa15.15■□□□□ 0.02
LETMD1-223ENST00000550442 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
LETMD1-223ENST00000550442 RARSP54136 660 aaKnown RBP15.15■□□□□ 0.02
LETMD1-223ENST00000550442 COG3Q96JB2 828 aa15.15■□□□□ 0.02
LETMD1-223ENST00000550442 GGNBP2Q9H3C7 697 aa15.15■□□□□ 0.02
LETMD1-223ENST00000550442 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
LETMD1-223ENST00000550442 ANKARQ7Z5J8 1434 aa15.15■□□□□ 0.02
LETMD1-223ENST00000550442 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
LETMD1-223ENST00000550442 EVA1CP58658 441 aa15.14■□□□□ 0.01
LETMD1-223ENST00000550442 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
LETMD1-223ENST00000550442 BCL11BQ9C0K0 894 aaPredicted RBP15.14■□□□□ 0.01
LETMD1-223ENST00000550442 ANO8Q9HCE9 1232 aaPredicted RBP15.14■□□□□ 0.01
LETMD1-223ENST00000550442 KIAA0232Q92628 1395 aa15.13■□□□□ 0.01
LETMD1-223ENST00000550442 PLSCR1O15162 318 aa15.13■□□□□ 0.01
LETMD1-223ENST00000550442 CHRNA2Q15822 529 aa15.13■□□□□ 0.01
LETMD1-223ENST00000550442 ALDH1L2Q3SY69 923 aa15.13■□□□□ 0.01
LETMD1-223ENST00000550442 BACH2Q9BYV9 841 aa15.13■□□□□ 0.01
LETMD1-223ENST00000550442 TTC21AQ8NDW8 1320 aa15.13■□□□□ 0.01
LETMD1-223ENST00000550442 PLIN1O60240 522 aa15.12■□□□□ 0.01
LETMD1-223ENST00000550442 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
LETMD1-223ENST00000550442 POLKQ9UBT6 870 aa15.12■□□□□ 0.01
LETMD1-223ENST00000550442 U2SURPO15042 1029 aaKnown RBP15.11■□□□□ 0.01
LETMD1-223ENST00000550442 CLUAP1Q96AJ1 413 aa15.11■□□□□ 0.01
LETMD1-223ENST00000550442 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
LETMD1-223ENST00000550442 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
LETMD1-223ENST00000550442 PDGFDQ9GZP0 370 aaPredicted RBP15.11■□□□□ 0.01
LETMD1-223ENST00000550442 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
LETMD1-223ENST00000550442 MON2Q7Z3U7 1717 aa15.11■□□□□ 0.01
LETMD1-223ENST00000550442 KIF24Q5T7B8 1368 aa15.11■□□□□ 0.01
LETMD1-223ENST00000550442 SSH2Q76I76 1423 aa15.1■□□□□ 0.01
LETMD1-223ENST00000550442 PDE4AP27815 886 aa15.1■□□□□ 0.01
LETMD1-223ENST00000550442 GPR162Q16538 588 aa15.1■□□□□ 0.01
LETMD1-223ENST00000550442 ZKSCAN2Q63HK3 967 aa15.1■□□□□ 0.01
LETMD1-223ENST00000550442 KIF16BQ96L93 1317 aa15.1■□□□□ 0.01
LETMD1-223ENST00000550442 OVOS2A0A0G2JMS6 1433 aa15.09■□□□□ 0.01
LETMD1-223ENST00000550442 OVOS2A0A0J9YW53 1432 aa15.09■□□□□ 0.01
LETMD1-223ENST00000550442 OVOS2Q6IE36 1432 aa15.09■□□□□ 0.01
LETMD1-223ENST00000550442 SBF2Q86WG5 1849 aa15.09■□□□□ 0.01
LETMD1-223ENST00000550442 MTFR1LQ9H019 292 aa15.09■□□□□ 0.01
LETMD1-223ENST00000550442 STK32BQ9NY57 414 aa15.09■□□□□ 0.01
LETMD1-223ENST00000550442 PARP4Q9UKK3 1724 aaKnown RBP15.09■□□□□ 0.01
LETMD1-223ENST00000550442 AKAP12Q02952 1782 aa15.08■□□□□ 0.01
LETMD1-223ENST00000550442 PHRF1Q9P1Y6 1649 aaKnown RBP15.08■□□□□ 0
LETMD1-223ENST00000550442 RIPK4P57078 832 aa15.08■□□□□ 0
LETMD1-223ENST00000550442 ZC3H6P61129 1189 aaKnown RBP15.08■□□□□ 0
LETMD1-223ENST00000550442 NFE2L2Q16236 605 aa15.08■□□□□ 0
LETMD1-223ENST00000550442 ARHGAP45Q92619 1136 aa15.08■□□□□ 0
LETMD1-223ENST00000550442 RWDD1Q9H446 243 aaPredicted RBP15.08■□□□□ 0
LETMD1-223ENST00000550442 THRAP3Q9Y2W1 955 aaKnown RBP15.08■□□□□ 0
LETMD1-223ENST00000550442 TTC21BQ7Z4L5 1316 aa15.08■□□□□ 0
LETMD1-223ENST00000550442 BCAR3O75815 825 aa15.07■□□□□ 0
LETMD1-223ENST00000550442 GNAI1P63096 354 aa15.07■□□□□ 0
LETMD1-223ENST00000550442 NGDNQ8NEJ9 315 aaKnown RBP15.07■□□□□ 0
LETMD1-223ENST00000550442 RSPH6AQ9H0K4 717 aa15.07■□□□□ 0
LETMD1-223ENST00000550442 TRIM35Q9UPQ4 493 aa15.07■□□□□ 0
LETMD1-223ENST00000550442 ITSN1Q15811 1721 aa15.06■□□□□ 0
LETMD1-223ENST00000550442 IL13P35225 146 aa15.06■□□□□ 0
LETMD1-223ENST00000550442 NEUROD2Q15784 382 aa15.06■□□□□ 0
LETMD1-223ENST00000550442 FAM161AQ3B820 660 aa15.06■□□□□ 0
LETMD1-223ENST00000550442 C20orf194Q5TEA3 1177 aa15.06■□□□□ 0
LETMD1-223ENST00000550442 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
LETMD1-223ENST00000550442 ARXQ96QS3 562 aa15.06■□□□□ 0
LETMD1-223ENST00000550442 IFT57Q9NWB7 429 aa15.06■□□□□ 0
LETMD1-223ENST00000550442 DDX19BQ9UMR2 479 aa15.06■□□□□ 0
LETMD1-223ENST00000550442 EIF5BO60841 1220 aaKnown RBP15.05■□□□□ -0
LETMD1-223ENST00000550442 USP31Q70CQ4 1352 aa15.05■□□□□ -0
LETMD1-223ENST00000550442 MAP3K5Q99683 1374 aa15.05■□□□□ -0
LETMD1-223ENST00000550442 PEAK1Q9H792 1746 aa15.04■□□□□ -0
LETMD1-223ENST00000550442 SLC15A2Q16348 729 aa15.04■□□□□ -0
LETMD1-223ENST00000550442 DZIP1LQ8IYY4 767 aaKnown RBP15.04■□□□□ -0
LETMD1-223ENST00000550442 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
LETMD1-223ENST00000550442 SHANK3Q9BYB0 1731 aa15.03■□□□□ -0
LETMD1-223ENST00000550442 TOPAZ1Q8N9V7 1692 aa15.03■□□□□ -0
LETMD1-223ENST00000550442 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
LETMD1-223ENST00000550442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.03■□□□□ -0
LETMD1-223ENST00000550442 FTSJ3Q8IY81 847 aaKnown RBP15.03■□□□□ -0
LETMD1-223ENST00000550442 SGIP1Q9BQI5 828 aa15.03■□□□□ -0
LETMD1-223ENST00000550442 NOP58Q9Y2X3 529 aaKnown RBP15.03■□□□□ -0
LETMD1-223ENST00000550442 USP6P35125 1406 aa15.02■□□□□ -0
LETMD1-223ENST00000550442 RRP7AQ9Y3A4 280 aaKnown RBP15.02■□□□□ -0
LETMD1-223ENST00000550442 MAP2P11137 1827 aaKnown RBP15.01□□□□□ -0.01
LETMD1-223ENST00000550442 ATF7IPQ6VMQ6 1270 aa15.01□□□□□ -0.01
LETMD1-223ENST00000550442 PROM2Q8N271 834 aa15.01□□□□□ -0.01
LETMD1-223ENST00000550442 ACEP12821 1306 aa15□□□□□ -0.01
LETMD1-223ENST00000550442 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms