RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 DCTPP1Q9H773 170 aa8.98□□□□□ -0.97
PDZRN4-204ENST00000548316 LMO7Q8WWI1 1683 aa8.98□□□□□ -0.97
PDZRN4-204ENST00000548316 CAMTA1Q9Y6Y1 1673 aa8.98□□□□□ -0.97
PDZRN4-204ENST00000548316 ACEP12821 1306 aa8.98□□□□□ -0.97
PDZRN4-204ENST00000548316 ZNF142P52746 1687 aaPredicted RBP8.98□□□□□ -0.97
PDZRN4-204ENST00000548316 LNPKQ9C0E8 428 aa8.97□□□□□ -0.97
PDZRN4-204ENST00000548316 ANKARQ7Z5J8 1434 aa8.97□□□□□ -0.97
PDZRN4-204ENST00000548316 GSPT1P15170 499 aaKnown RBP8.97□□□□□ -0.97
PDZRN4-204ENST00000548316 MCM4P33991 863 aa8.97□□□□□ -0.97
PDZRN4-204ENST00000548316 MFAP1P55081 439 aaKnown RBP8.97□□□□□ -0.97
PDZRN4-204ENST00000548316 CHMP5Q9NZZ3 219 aa8.97□□□□□ -0.97
PDZRN4-204ENST00000548316 ANKRD44Q8N8A2 993 aa8.97□□□□□ -0.97
PDZRN4-204ENST00000548316 TTC21AQ8NDW8 1320 aa8.97□□□□□ -0.97
PDZRN4-204ENST00000548316 SIPA1L3O60292 1781 aaPredicted RBP8.96□□□□□ -0.97
PDZRN4-204ENST00000548316 SBNO1A3KN83 1393 aa8.96□□□□□ -0.97
PDZRN4-204ENST00000548316 TBC1D9Q6ZT07 1266 aa8.96□□□□□ -0.97
PDZRN4-204ENST00000548316 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.97
PDZRN4-204ENST00000548316 SLKQ9H2G2 1235 aaPredicted RBP8.96□□□□□ -0.97
PDZRN4-204ENST00000548316 ADAMTS7Q9UKP4 1686 aa8.96□□□□□ -0.98
PDZRN4-204ENST00000548316 NFAT5O94916 1531 aa8.96□□□□□ -0.98
PDZRN4-204ENST00000548316 HDGFP51858 240 aaKnown RBP8.96□□□□□ -0.98
PDZRN4-204ENST00000548316 CLEC17AQ6ZS10 378 aa8.96□□□□□ -0.98
PDZRN4-204ENST00000548316 C1orf115Q9H7X2 142 aa8.96□□□□□ -0.98
PDZRN4-204ENST00000548316 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.98
PDZRN4-204ENST00000548316 IGSF1Q8N6C5 1336 aa8.95□□□□□ -0.98
PDZRN4-204ENST00000548316 DCTN1Q14203 1278 aa8.95□□□□□ -0.98
PDZRN4-204ENST00000548316 PXDNLA1KZ92 1463 aa8.95□□□□□ -0.98
PDZRN4-204ENST00000548316 MSH6P52701 1360 aa8.95□□□□□ -0.98
PDZRN4-204ENST00000548316 PTPRCP08575 1304 aa8.95□□□□□ -0.98
PDZRN4-204ENST00000548316 CIZ1Q9ULV3 898 aaPredicted RBP8.95□□□□□ -0.98
PDZRN4-204ENST00000548316 CD2BP2O95400 341 aaKnown RBP8.94□□□□□ -0.98
PDZRN4-204ENST00000548316 MAP3K19Q56UN5 1328 aa8.94□□□□□ -0.98
PDZRN4-204ENST00000548316 SALL3Q9BXA9 1300 aa8.94□□□□□ -0.98
PDZRN4-204ENST00000548316 MLECQ14165 292 aa8.94□□□□□ -0.98
PDZRN4-204ENST00000548316 CEP85Q6P2H3 762 aa8.94□□□□□ -0.98
PDZRN4-204ENST00000548316 KRT24Q2M2I5 525 aa8.94□□□□□ -0.98
PDZRN4-204ENST00000548316 TTC22Q5TAA0 569 aa8.94□□□□□ -0.98
PDZRN4-204ENST00000548316 ANKRD45Q5TZF3 282 aa8.94□□□□□ -0.98
PDZRN4-204ENST00000548316 TBX22Q9Y458 520 aa8.94□□□□□ -0.98
PDZRN4-204ENST00000548316 FLT4P35916 1363 aa8.93□□□□□ -0.98
PDZRN4-204ENST00000548316 RAB3GAP1Q15042 981 aa8.93□□□□□ -0.98
PDZRN4-204ENST00000548316 SULT6B1Q6IMI4 303 aa8.93□□□□□ -0.98
PDZRN4-204ENST00000548316 NCAPD2Q15021 1401 aa8.93□□□□□ -0.98
PDZRN4-204ENST00000548316 AK9Q5TCS8 1911 aa8.93□□□□□ -0.98
PDZRN4-204ENST00000548316 HSP90AB2PQ58FF8 381 aa8.93□□□□□ -0.98
PDZRN4-204ENST00000548316 LMTK3Q96Q04 1460 aa8.92□□□□□ -0.98
PDZRN4-204ENST00000548316 CDC45O75419 566 aa8.92□□□□□ -0.98
PDZRN4-204ENST00000548316 RPAP2Q8IXW5 612 aaPredicted RBP8.92□□□□□ -0.98
PDZRN4-204ENST00000548316 IL17RAQ96F46 866 aa8.92□□□□□ -0.98
PDZRN4-204ENST00000548316 TRPM3Q9HCF6 1732 aaPredicted RBP8.92□□□□□ -0.98
PDZRN4-204ENST00000548316 OSBPL3Q9H4L5 887 aa8.91□□□□□ -0.98
PDZRN4-204ENST00000548316 ELL2O00472 640 aaPredicted RBP8.91□□□□□ -0.98
PDZRN4-204ENST00000548316 HSCBQ8IWL3 235 aa8.91□□□□□ -0.98
PDZRN4-204ENST00000548316 FAM43AQ8N2R8 423 aa8.91□□□□□ -0.98
PDZRN4-204ENST00000548316 HTATSF1O43719 755 aaKnown RBP8.91□□□□□ -0.98
PDZRN4-204ENST00000548316 CYP2E1P05181 493 aaPredicted RBP8.91□□□□□ -0.98
PDZRN4-204ENST00000548316 MTHFSDQ2M296 383 aaKnown RBP8.91□□□□□ -0.98
PDZRN4-204ENST00000548316 MCM10Q7L590 875 aa8.91□□□□□ -0.98
PDZRN4-204ENST00000548316 USP26Q9BXU7 913 aa8.9□□□□□ -0.98
PDZRN4-204ENST00000548316 XRCC6P12956 609 aaKnown RBP eCLIP8.9□□□□□ -0.99
PDZRN4-204ENST00000548316 C16orf71Q8IYS4 520 aaPredicted RBP8.9□□□□□ -0.99
PDZRN4-204ENST00000548316 OTUD7AQ8TE49 926 aaPredicted RBP8.9□□□□□ -0.99
PDZRN4-204ENST00000548316 SOS1Q07889 1333 aaPredicted RBP8.9□□□□□ -0.99
PDZRN4-204ENST00000548316 SLIT3O75094 1523 aa8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 L1TD1Q5T7N2 865 aaKnown RBP8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 TNPO1Q92973 898 aaKnown RBP8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 MEIS3Q99687 375 aa8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 K7ELQ4 463 aaPredicted RBP8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 FOXO3O43524 673 aa8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 TRAK2O60296 914 aa8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 G2E3Q7L622 706 aa8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 EYA1Q99502 592 aa8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 RBM42Q9BTD8 480 aaKnown RBP8.89□□□□□ -0.99
PDZRN4-204ENST00000548316 HAP1P54257 671 aaPredicted RBP8.88□□□□□ -0.99
PDZRN4-204ENST00000548316 GAS2L2Q8NHY3 880 aa8.88□□□□□ -0.99
PDZRN4-204ENST00000548316 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
PDZRN4-204ENST00000548316 DDX11L8A8MPP1 907 aa8.88□□□□□ -0.99
PDZRN4-204ENST00000548316 AMOTL2Q9Y2J4 779 aa8.88□□□□□ -0.99
PDZRN4-204ENST00000548316 CEMIPQ8WUJ3 1361 aa8.88□□□□□ -0.99
PDZRN4-204ENST00000548316 SPRYD3Q8NCJ5 442 aa8.87□□□□□ -0.99
PDZRN4-204ENST00000548316 SDSP20132 328 aa8.87□□□□□ -0.99
PDZRN4-204ENST00000548316 ISY1Q9ULR0 285 aaKnown RBP8.87□□□□□ -0.99
PDZRN4-204ENST00000548316 IBTKQ9P2D0 1353 aaPredicted RBP8.87□□□□□ -0.99
PDZRN4-204ENST00000548316 ADAMTSL3P82987 1691 aa8.86□□□□□ -0.99
PDZRN4-204ENST00000548316 EIF5BO60841 1220 aaKnown RBP8.86□□□□□ -0.99
PDZRN4-204ENST00000548316 RABEP1Q15276 862 aa8.86□□□□□ -0.99
PDZRN4-204ENST00000548316 RRAGDQ9NQL2 400 aaPredicted RBP8.86□□□□□ -0.99
PDZRN4-204ENST00000548316 HOXC9P31274 260 aa8.86□□□□□ -0.99
PDZRN4-204ENST00000548316 CCT4P50991 539 aaKnown RBP8.86□□□□□ -0.99
PDZRN4-204ENST00000548316 MST1RQ04912 1400 aa8.86□□□□□ -0.99
PDZRN4-204ENST00000548316 MAP3K5Q99683 1374 aa8.85□□□□□ -0.99
PDZRN4-204ENST00000548316 OVOS2A0A0G2JMS6 1433 aa8.85□□□□□ -0.99
PDZRN4-204ENST00000548316 RGPD5Q99666 1765 aa8.85□□□□□ -0.99
PDZRN4-204ENST00000548316 ALS2Q96Q42 1657 aa8.85□□□□□ -0.99
PDZRN4-204ENST00000548316 SLC26A8Q96RN1 970 aa8.85□□□□□ -0.99
PDZRN4-204ENST00000548316 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
PDZRN4-204ENST00000548316 STAP2Q9UGK3 403 aa8.85□□□□□ -0.99
PDZRN4-204ENST00000548316 SMARCA5O60264 1052 aaPredicted RBP8.85□□□□□ -0.99
PDZRN4-204ENST00000548316 SLC4A2P04920 1241 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 CEBPAP49715 358 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms