RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 QRICH2Q9H0J4 1663 aa18.02■□□□□ 0.48
HOXC11-202ENST00000546378 LMOD2Q6P5Q4 547 aa18.02■□□□□ 0.47
HOXC11-202ENST00000546378 RBSNQ9H1K0 784 aa18.02■□□□□ 0.47
HOXC11-202ENST00000546378 AK9Q5TCS8 1911 aa18.01■□□□□ 0.47
HOXC11-202ENST00000546378 SMC5Q8IY18 1101 aa18.01■□□□□ 0.47
HOXC11-202ENST00000546378 KIF16BQ96L93 1317 aa18.01■□□□□ 0.47
HOXC11-202ENST00000546378 CDC45O75419 566 aa18.01■□□□□ 0.47
HOXC11-202ENST00000546378 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
HOXC11-202ENST00000546378 A0A0U1RQG5 324 aaPredicted RBP18■□□□□ 0.47
HOXC11-202ENST00000546378 MBIPQ9NS73 344 aa18■□□□□ 0.47
HOXC11-202ENST00000546378 IGSF3O75054 1194 aa18■□□□□ 0.47
HOXC11-202ENST00000546378 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
HOXC11-202ENST00000546378 GSPT1P15170 499 aaKnown RBP17.99■□□□□ 0.47
HOXC11-202ENST00000546378 RAB3GAP1Q15042 981 aa17.99■□□□□ 0.47
HOXC11-202ENST00000546378 SIRT2Q8IXJ6 389 aa17.99■□□□□ 0.47
HOXC11-202ENST00000546378 PRR36Q9H6K5 1346 aa17.99■□□□□ 0.47
HOXC11-202ENST00000546378 ZSCAN23Q3MJ62 389 aa17.99■□□□□ 0.47
HOXC11-202ENST00000546378 IL1RAPL2Q9NP60 686 aa17.99■□□□□ 0.47
HOXC11-202ENST00000546378 ZHX1Q9UKY1 873 aaPredicted RBP17.99■□□□□ 0.47
HOXC11-202ENST00000546378 PPIP5K1Q6PFW1 1433 aa17.98■□□□□ 0.47
HOXC11-202ENST00000546378 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
HOXC11-202ENST00000546378 UQCRHLA0A096LP55 91 aa17.98■□□□□ 0.47
HOXC11-202ENST00000546378 UQCRHP07919 91 aa17.98■□□□□ 0.47
HOXC11-202ENST00000546378 HDAC1Q13547 482 aaPredicted RBP17.98■□□□□ 0.47
HOXC11-202ENST00000546378 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
HOXC11-202ENST00000546378 POLR3AO14802 1390 aaPredicted RBP17.98■□□□□ 0.47
HOXC11-202ENST00000546378 COG3Q96JB2 828 aa17.98■□□□□ 0.47
HOXC11-202ENST00000546378 PLEKHG1Q9ULL1 1385 aa17.98■□□□□ 0.47
HOXC11-202ENST00000546378 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
HOXC11-202ENST00000546378 MEIS3Q99687 375 aa17.97■□□□□ 0.47
HOXC11-202ENST00000546378 CCDC9Q9Y3X0 531 aaKnown RBP17.97■□□□□ 0.47
HOXC11-202ENST00000546378 ACEP12821 1306 aa17.97■□□□□ 0.47
HOXC11-202ENST00000546378 KIF2CQ99661 725 aa17.97■□□□□ 0.47
HOXC11-202ENST00000546378 ZBTB7BO15156 539 aaPredicted RBP17.96■□□□□ 0.47
HOXC11-202ENST00000546378 PUS7Q96PZ0 661 aaKnown RBP17.96■□□□□ 0.47
HOXC11-202ENST00000546378 CASC1Q6TDU7 716 aa17.96■□□□□ 0.46
HOXC11-202ENST00000546378 SDSP20132 328 aa17.95■□□□□ 0.46
HOXC11-202ENST00000546378 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
HOXC11-202ENST00000546378 ZSCAN30Q86W11 494 aa17.95■□□□□ 0.46
HOXC11-202ENST00000546378 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
HOXC11-202ENST00000546378 SPC24Q8NBT2 197 aa17.94■□□□□ 0.46
HOXC11-202ENST00000546378 ST18O60284 1047 aa17.94■□□□□ 0.46
HOXC11-202ENST00000546378 BMP2KLQ5H9B9 411 aa17.94■□□□□ 0.46
HOXC11-202ENST00000546378 RRP9O43818 475 aaKnown RBP17.94■□□□□ 0.46
HOXC11-202ENST00000546378 VAMP4O75379 141 aa17.94■□□□□ 0.46
HOXC11-202ENST00000546378 NPC1L1Q9UHC9 1359 aa17.93■□□□□ 0.46
HOXC11-202ENST00000546378 PPFIA3O75145 1194 aa17.93■□□□□ 0.46
HOXC11-202ENST00000546378 SKOR2Q2VWA4 1001 aaPredicted RBP17.93■□□□□ 0.46
HOXC11-202ENST00000546378 ARHGEF28Q8N1W1 1705 aaKnown RBP17.93■□□□□ 0.46
HOXC11-202ENST00000546378 PTPRUQ92729 1446 aa17.93■□□□□ 0.46
HOXC11-202ENST00000546378 FOXO3O43524 673 aa17.92■□□□□ 0.46
HOXC11-202ENST00000546378 CPA1P15085 419 aa17.92■□□□□ 0.46
HOXC11-202ENST00000546378 FOSBP53539 338 aa17.92■□□□□ 0.46
HOXC11-202ENST00000546378 CCDC173Q0VFZ6 552 aa17.92■□□□□ 0.46
HOXC11-202ENST00000546378 ESCO1Q5FWF5 840 aa17.92■□□□□ 0.46
HOXC11-202ENST00000546378 PROSER2Q86WR7 435 aaPredicted RBP17.92■□□□□ 0.46
HOXC11-202ENST00000546378 FBXW7Q969H0 707 aa17.92■□□□□ 0.46
HOXC11-202ENST00000546378 FIBPO43427 364 aa17.92■□□□□ 0.46
HOXC11-202ENST00000546378 PLEKHM2Q8IWE5 1019 aa17.92■□□□□ 0.46
HOXC11-202ENST00000546378 FER1L4A9Z1Z3 1794 aa17.91■□□□□ 0.46
HOXC11-202ENST00000546378 RIMS1Q86UR5 1692 aaKnown RBP17.91■□□□□ 0.46
HOXC11-202ENST00000546378 RBM25P49756 843 aaKnown RBP17.9■□□□□ 0.46
HOXC11-202ENST00000546378 NINLQ9Y2I6 1382 aa17.9■□□□□ 0.46
HOXC11-202ENST00000546378 NGEFQ8N5V2 710 aa17.9■□□□□ 0.46
HOXC11-202ENST00000546378 PLEKHF1Q96S99 279 aa17.9■□□□□ 0.46
HOXC11-202ENST00000546378 TTC12Q9H892 705 aaPredicted RBP17.9■□□□□ 0.46
HOXC11-202ENST00000546378 TMEM63CQ9P1W3 806 aa17.9■□□□□ 0.46
HOXC11-202ENST00000546378 USP25Q9UHP3 1055 aa17.9■□□□□ 0.46
HOXC11-202ENST00000546378 C3P01024 1663 aa17.9■□□□□ 0.46
HOXC11-202ENST00000546378 NUTM1Q86Y26 1132 aa17.9■□□□□ 0.46
HOXC11-202ENST00000546378 MYOM1P52179 1685 aa17.9■□□□□ 0.46
HOXC11-202ENST00000546378 EIF2S2P20042 333 aaKnown RBP17.89■□□□□ 0.45
HOXC11-202ENST00000546378 NLRP6P59044 892 aa17.89■□□□□ 0.45
HOXC11-202ENST00000546378 MRPL50Q8N5N7 158 aaKnown RBP17.89■□□□□ 0.45
HOXC11-202ENST00000546378 GPT2Q8TD30 523 aa17.89■□□□□ 0.45
HOXC11-202ENST00000546378 POLKQ9UBT6 870 aa17.89■□□□□ 0.45
HOXC11-202ENST00000546378 INTS3Q68E01 1043 aaKnown RBP17.89■□□□□ 0.45
HOXC11-202ENST00000546378 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
HOXC11-202ENST00000546378 GCC1Q96CN9 775 aa17.88■□□□□ 0.45
HOXC11-202ENST00000546378 GADD45BO75293 160 aaPredicted RBP17.87■□□□□ 0.45
HOXC11-202ENST00000546378 FKBP5Q13451 457 aaPredicted RBP17.87■□□□□ 0.45
HOXC11-202ENST00000546378 G2E3Q7L622 706 aa17.87■□□□□ 0.45
HOXC11-202ENST00000546378 ZBTB9Q96C00 473 aa17.87■□□□□ 0.45
HOXC11-202ENST00000546378 SPDYE4A6NLX3 237 aa17.87■□□□□ 0.45
HOXC11-202ENST00000546378 GNAI1P63096 354 aa17.87■□□□□ 0.45
HOXC11-202ENST00000546378 CBX1P83916 185 aa17.87■□□□□ 0.45
HOXC11-202ENST00000546378 OS9Q13438 667 aaPredicted RBP17.87■□□□□ 0.45
HOXC11-202ENST00000546378 KLHL40Q2TBA0 621 aa17.87■□□□□ 0.45
HOXC11-202ENST00000546378 UBR1Q8IWV7 1749 aa17.86■□□□□ 0.45
HOXC11-202ENST00000546378 TTC21BQ7Z4L5 1316 aa17.86■□□□□ 0.45
HOXC11-202ENST00000546378 NFE2L2Q16236 605 aa17.86■□□□□ 0.45
HOXC11-202ENST00000546378 PALD1Q9ULE6 856 aa17.86■□□□□ 0.45
HOXC11-202ENST00000546378 ABTB2Q8N961 1025 aa17.86■□□□□ 0.45
HOXC11-202ENST00000546378 PSME1Q06323 249 aa17.85■□□□□ 0.45
HOXC11-202ENST00000546378 FERMT3Q86UX7 667 aa17.85■□□□□ 0.45
HOXC11-202ENST00000546378 SIRT1Q96EB6 747 aa17.85■□□□□ 0.45
HOXC11-202ENST00000546378 LMBRD1Q9NUN5 540 aa17.85■□□□□ 0.45
HOXC11-202ENST00000546378 MYO3AQ8NEV4 1616 aa17.85■□□□□ 0.45
HOXC11-202ENST00000546378 ANXA1P04083 346 aa17.85■□□□□ 0.45
HOXC11-202ENST00000546378 RABEP1Q15276 862 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms