RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 CHMP4CQ96CF2 233 aa12.44□□□□□ -0.42
TOP3A-208ENST00000542570 C16orf71Q8IYS4 520 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-208ENST00000542570 TTC21AQ8NDW8 1320 aa12.44□□□□□ -0.42
TOP3A-208ENST00000542570 DEKP35659 375 aaKnown RBP12.43□□□□□ -0.42
TOP3A-208ENST00000542570 KCNQ3O43525 872 aa12.43□□□□□ -0.42
TOP3A-208ENST00000542570 CCT4P50991 539 aaKnown RBP12.43□□□□□ -0.42
TOP3A-208ENST00000542570 BTG4Q9NY30 223 aa12.43□□□□□ -0.42
TOP3A-208ENST00000542570 SLAIN2Q9P270 581 aa12.43□□□□□ -0.42
TOP3A-208ENST00000542570 G3V3G9 751 aa12.43□□□□□ -0.42
TOP3A-208ENST00000542570 EXOC5O00471 708 aa12.43□□□□□ -0.42
TOP3A-208ENST00000542570 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
TOP3A-208ENST00000542570 FBXW7Q969H0 707 aa12.43□□□□□ -0.42
TOP3A-208ENST00000542570 IFNL2Q8IZJ0 200 aa12.43□□□□□ -0.42
TOP3A-208ENST00000542570 MAP3K2Q9Y2U5 619 aa12.43□□□□□ -0.42
TOP3A-208ENST00000542570 EIF5BO60841 1220 aaKnown RBP12.42□□□□□ -0.42
TOP3A-208ENST00000542570 AMOTQ4VCS5 1084 aa12.42□□□□□ -0.42
TOP3A-208ENST00000542570 WASHC4Q2M389 1173 aa12.42□□□□□ -0.42
TOP3A-208ENST00000542570 VPS37DQ86XT2 251 aa12.42□□□□□ -0.42
TOP3A-208ENST00000542570 CCDC8Q9H0W5 538 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-208ENST00000542570 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
TOP3A-208ENST00000542570 FLT4P35916 1363 aa12.41□□□□□ -0.42
TOP3A-208ENST00000542570 PPP1R1BQ9UD71 204 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-208ENST00000542570 ABCC3O15438 1527 aa12.41□□□□□ -0.42
TOP3A-208ENST00000542570 ZNF335Q9H4Z2 1342 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-208ENST00000542570 CWF19L2Q2TBE0 894 aaKnown RBP12.41□□□□□ -0.42
TOP3A-208ENST00000542570 COPS6Q7L5N1 327 aa12.41□□□□□ -0.42
TOP3A-208ENST00000542570 FSD1Q9BTV5 496 aa12.41□□□□□ -0.42
TOP3A-208ENST00000542570 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
TOP3A-208ENST00000542570 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-208ENST00000542570 IP6K1Q92551 441 aa12.41□□□□□ -0.42
TOP3A-208ENST00000542570 LRRCC1Q9C099 1032 aa12.41□□□□□ -0.42
TOP3A-208ENST00000542570 GOLGA6L4A6NEF3 574 aa12.4□□□□□ -0.42
TOP3A-208ENST00000542570 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
TOP3A-208ENST00000542570 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
TOP3A-208ENST00000542570 AACSQ86V21 672 aa12.4□□□□□ -0.42
TOP3A-208ENST00000542570 DNAAF4Q8WXU2 420 aa12.4□□□□□ -0.42
TOP3A-208ENST00000542570 HECW2Q9P2P5 1572 aa12.4□□□□□ -0.42
TOP3A-208ENST00000542570 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
TOP3A-208ENST00000542570 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
TOP3A-208ENST00000542570 A0A087WZG4 1122 aa12.4□□□□□ -0.42
TOP3A-208ENST00000542570 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
TOP3A-208ENST00000542570 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
TOP3A-208ENST00000542570 TMEM94Q12767 1356 aa12.4□□□□□ -0.43
TOP3A-208ENST00000542570 PIK3C2GO75747 1445 aa12.4□□□□□ -0.43
TOP3A-208ENST00000542570 WWC3Q9ULE0 1092 aa12.39□□□□□ -0.43
TOP3A-208ENST00000542570 MTMR7Q9Y216 660 aa12.39□□□□□ -0.43
TOP3A-208ENST00000542570 ST18O60284 1047 aa12.39□□□□□ -0.43
TOP3A-208ENST00000542570 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
TOP3A-208ENST00000542570 CNNM1Q9NRU3 951 aa12.39□□□□□ -0.43
TOP3A-208ENST00000542570 FKBP4Q02790 459 aaKnown RBP eCLIP12.39□□□□□ -0.43
TOP3A-208ENST00000542570 XAGE3Q8WTP9 111 aa12.39□□□□□ -0.43
TOP3A-208ENST00000542570 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-208ENST00000542570 TRPM2O94759 1503 aa12.39□□□□□ -0.43
TOP3A-208ENST00000542570 CWC27Q6UX04 472 aaKnown RBP12.39□□□□□ -0.43
TOP3A-208ENST00000542570 MRPL50Q8N5N7 158 aaKnown RBP12.39□□□□□ -0.43
TOP3A-208ENST00000542570 NEK4P51957 841 aa12.38□□□□□ -0.43
TOP3A-208ENST00000542570 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
TOP3A-208ENST00000542570 INTS3Q68E01 1043 aaKnown RBP12.38□□□□□ -0.43
TOP3A-208ENST00000542570 GCC1Q96CN9 775 aa12.38□□□□□ -0.43
TOP3A-208ENST00000542570 KDM5DQ9BY66 1539 aa12.38□□□□□ -0.43
TOP3A-208ENST00000542570 CDC45O75419 566 aa12.38□□□□□ -0.43
TOP3A-208ENST00000542570 REC8O95072 547 aa12.38□□□□□ -0.43
TOP3A-208ENST00000542570 BOLA2Q9H3K6 86 aa12.38□□□□□ -0.43
TOP3A-208ENST00000542570 PA2G4Q9UQ80 394 aaKnown RBP12.38□□□□□ -0.43
TOP3A-208ENST00000542570 RAD21O60216 631 aa12.37□□□□□ -0.43
TOP3A-208ENST00000542570 CCDC27Q2M243 656 aa12.37□□□□□ -0.43
TOP3A-208ENST00000542570 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
TOP3A-208ENST00000542570 KDM5CP41229 1560 aa12.37□□□□□ -0.43
TOP3A-208ENST00000542570 PPP1R42Q7Z4L9 355 aa12.37□□□□□ -0.43
TOP3A-208ENST00000542570 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
TOP3A-208ENST00000542570 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
TOP3A-208ENST00000542570 SETD1BQ9UPS6 1966 aaKnown RBP12.37□□□□□ -0.43
TOP3A-208ENST00000542570 FMNL2Q96PY5 1086 aa12.37□□□□□ -0.43
TOP3A-208ENST00000542570 EFCAB6Q5THR3 1501 aa12.37□□□□□ -0.43
TOP3A-208ENST00000542570 IL17REQ8NFR9 667 aa12.36□□□□□ -0.43
TOP3A-208ENST00000542570 PHF14O94880 888 aa12.36□□□□□ -0.43
TOP3A-208ENST00000542570 GNL2Q13823 731 aaKnown RBP12.36□□□□□ -0.43
TOP3A-208ENST00000542570 UPF3BQ9BZI7 483 aaKnown RBP12.36□□□□□ -0.43
TOP3A-208ENST00000542570 EDC4Q6P2E9 1401 aaKnown RBP12.36□□□□□ -0.43
TOP3A-208ENST00000542570 CCDC57Q2TAC2 916 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-208ENST00000542570 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 RIMBP3CA6NJZ7 1639 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 RIMBP3BA6NNM3 1639 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 RIMBP3Q9UFD9 1639 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 HSP90AB4PQ58FF6 505 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-208ENST00000542570 BCORL1Q5H9F3 1711 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 STARD3NLO95772 234 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 TOM1O60784 492 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
TOP3A-208ENST00000542570 AKAP4Q5JQC9 854 aa12.35□□□□□ -0.43
TOP3A-208ENST00000542570 ERC2O15083 957 aa12.34□□□□□ -0.43
TOP3A-208ENST00000542570 ANKRD13DQ6ZTN6 518 aa12.34□□□□□ -0.43
TOP3A-208ENST00000542570 KLHDC4Q8TBB5 520 aa12.34□□□□□ -0.43
TOP3A-208ENST00000542570 PRAMEF22A3QJZ6 481 aa12.34□□□□□ -0.43
TOP3A-208ENST00000542570 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
TOP3A-208ENST00000542570 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
TOP3A-208ENST00000542570 A1BGP04217 495 aa12.34□□□□□ -0.43
TOP3A-208ENST00000542570 KCNQ4P56696 695 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms