RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TCP11L2	Q8N4U5	519 aa		7.09	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	DDX17	Q92841	729 aa	Known RBP	7.09	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	SYTL4	Q96C24	671 aa	Predicted RBP	7.09	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	FOXD4L1	Q9NU39	408 aa		7.09	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	FSD2	A1L4K1	749 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	KCNA4	P22459	653 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	RBM6	P78332	1123 aa	Known RBP	7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	RRS1	Q15050	365 aa	Known RBP	7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	UNC5CL	Q8IV45	518 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	POLR3A	O14802	1390 aa	Predicted RBP	7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	NPC1L1	Q9UHC9	1359 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	RARS	P54136	660 aa	Known RBP	7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	GLIPR1L2	Q4G1C9	344 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	ASXL1	Q8IXJ9	1541 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	NPHP1	O15259	732 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	IL2RB	P14784	551 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	CLCN1	P35523	988 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	C22orf23	Q9BZE7	217 aa		7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	THRAP3	Q9Y2W1	955 aa	Known RBP	7.08	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	TRPM1	Q7Z4N2	1603 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	CARD14	Q9BXL6	1004 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	MYH16	Q9H6N6	1097 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	AFF2	P51816	1311 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	ERBB4	Q15303	1308 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	ADGRB1	O14514	1584 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	RTL1	A6NKG5	1358 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	DCAF8L1	A6NGE4	600 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	NWD1	Q149M9	1564 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	DDX54	Q8TDD1	881 aa	Known RBP	7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	CHMP5	Q9NZZ3	219 aa		7.07	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	SULT6B1	Q6IMI4	303 aa		7.06	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	RWDD1	Q9H446	243 aa	Predicted RBP	7.06	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	GRPEL1	Q9HAV7	217 aa		7.06	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	FCHSD2	O94868	740 aa		7.06	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	SMARCC1	Q92922	1105 aa	Predicted RBP	7.06	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	ZCRB1	Q8TBF4	217 aa	Known RBP	7.06	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	RUNDC1	Q96C34	613 aa		7.06	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	ESPN	B1AK53	854 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	MRE11	P49959	708 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	ARHGEF25	Q86VW2	580 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	GAS2L3	Q86XJ1	694 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	IFNL2	Q8IZJ0	200 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	USP31	Q70CQ4	1352 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	KIAA0232	Q92628	1395 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	HOXC9	P31274	260 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	CABP4	P57796	275 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	MAP3K19	Q56UN5	1328 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	BAG6	P46379	1132 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	TRIM44	Q96DX7	344 aa	Predicted RBP	7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	CARD10	Q9BWT7	1032 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	PNPLA6	Q8IY17	1366 aa		7.05	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	HSCB	Q8IWL3	235 aa		7.04	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	FTSJ3	Q8IY81	847 aa	Known RBP	7.04	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	EMILIN1	Q9Y6C2	1016 aa		7.04	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	NBPF14	Q5TI25	921 aa		7.04	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	AATK	Q6ZMQ8	1374 aa		7.04	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	KIF1A	Q12756	1690 aa		7.04	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	TSR2	Q969E8	191 aa	Known RBP	7.04	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	HMOX1	P09601	288 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	VPS72	Q15906	364 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	WDR17	Q8IZU2	1322 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	STK31	Q9BXU1	1019 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	TMOD3	Q9NYL9	352 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	PRKAR2B	P31323	418 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	FAM196A	Q6ZSG2	479 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	CHMP4B	Q9H444	224 aa	Known RBP	7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	HDAC5	Q9UQL6	1122 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	PCDH11X	Q9BZA7	1347 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	PCDH11Y	Q9BZA8	1340 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	ITPRIP	Q8IWB1	547 aa		7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	TNPO1	Q92973	898 aa	Known RBP	7.03	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	RRP9	O43818	475 aa	Known RBP	7.02	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	FAM98C	Q17RN3	349 aa	Known RBP	7.02	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	POLK	Q9UBT6	870 aa		7.02	□□□□□ -1.28
RAPGEF4-215	ENST00000540783	MVP	Q14764	893 aa	Known RBP	7.02	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	QRICH2	Q9H0J4	1663 aa		7.02	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	DZIP1L	Q8IYY4	767 aa	Known RBP	7.02	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	GJD4	Q96KN9	370 aa	Predicted RBP	7.02	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	LNPK	Q9C0E8	428 aa		7.02	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	TMX4	Q9H1E5	349 aa	Predicted RBP	7.02	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	MYO5B	Q9ULV0	1848 aa		7.02	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	XRN1	Q8IZH2	1706 aa	Known RBP	7.02	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	GNAI1	P63096	354 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	HSP90AB2P	Q58FF8	381 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	KRT27	Q7Z3Y8	459 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	TEX13A	Q9BXU3	409 aa	Predicted RBP	7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	SMC4	Q9NTJ3	1288 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	KNDC1	Q76NI1	1749 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	DDX11L8	A8MPP1	907 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	RIPK4	P57078	832 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	RBM10	P98175	930 aa	Known RBP	7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	ARID3A	Q99856	593 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	ZRANB1	Q9UGI0	708 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	CPSF1	Q10570	1443 aa	Known RBP	7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	GNAT3	A8MTJ3	354 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	ZKSCAN2	Q63HK3	967 aa		7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	RBM42	Q9BTD8	480 aa	Known RBP	7.01	□□□□□ -1.29
RAPGEF4-215	ENST00000540783	CPD	O75976	1380 aa		7.01	□□□□□ -1.29

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