RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 MPRIPQ6WCQ1 1025 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 TBX22Q9Y458 520 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 SPATA31D1Q6ZQQ2 1576 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 MAP4K4O95819 1239 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-208ENST00000538070 ZC3H6P61129 1189 aaKnown RBP10.8□□□□□ -0.68
UBE3B-208ENST00000538070 GAS2L2Q8NHY3 880 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 ARHGAP45Q92619 1136 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 USP6P35125 1406 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 GNAT3A8MTJ3 354 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
UBE3B-208ENST00000538070 ORAI2Q96SN7 254 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 IL1RAPL2Q9NP60 686 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 MSH6P52701 1360 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 MED14O60244 1454 aa10.8□□□□□ -0.68
UBE3B-208ENST00000538070 HOXC9P31274 260 aa10.79□□□□□ -0.68
UBE3B-208ENST00000538070 AATKQ6ZMQ8 1374 aa10.79□□□□□ -0.68
UBE3B-208ENST00000538070 ADGRB2O60241 1585 aa10.79□□□□□ -0.68
UBE3B-208ENST00000538070 ABCC4O15439 1325 aa10.79□□□□□ -0.68
UBE3B-208ENST00000538070 HAP1P54257 671 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-208ENST00000538070 HDGFL1Q5TGJ6 251 aa10.79□□□□□ -0.68
UBE3B-208ENST00000538070 ANKLE2Q86XL3 938 aa10.79□□□□□ -0.68
UBE3B-208ENST00000538070 AGLP35573 1532 aa10.79□□□□□ -0.68
UBE3B-208ENST00000538070 DDX17Q92841 729 aaKnown RBP10.79□□□□□ -0.68
UBE3B-208ENST00000538070 PHAXQ9H814 394 aaKnown RBP10.79□□□□□ -0.68
UBE3B-208ENST00000538070 LGR6Q9HBX8 967 aa10.79□□□□□ -0.68
UBE3B-208ENST00000538070 NCLP19338 710 aaKnown RBP10.78□□□□□ -0.68
UBE3B-208ENST00000538070 CEP85Q6P2H3 762 aa10.78□□□□□ -0.68
UBE3B-208ENST00000538070 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
UBE3B-208ENST00000538070 PLEKHG1Q9ULL1 1385 aa10.78□□□□□ -0.68
UBE3B-208ENST00000538070 CDC45O75419 566 aa10.78□□□□□ -0.68
UBE3B-208ENST00000538070 CD2BP2O95400 341 aaKnown RBP10.78□□□□□ -0.68
UBE3B-208ENST00000538070 TEFQ10587 303 aa10.78□□□□□ -0.68
UBE3B-208ENST00000538070 FLIIQ13045 1269 aa10.78□□□□□ -0.68
UBE3B-208ENST00000538070 PLEKHM2Q8IWE5 1019 aa10.78□□□□□ -0.68
UBE3B-208ENST00000538070 GSPT1P15170 499 aaKnown RBP10.78□□□□□ -0.68
UBE3B-208ENST00000538070 AIMP1Q12904 312 aaKnown RBP10.78□□□□□ -0.68
UBE3B-208ENST00000538070 BMP2KLQ5H9B9 411 aa10.78□□□□□ -0.68
UBE3B-208ENST00000538070 IL17REQ8NFR9 667 aa10.78□□□□□ -0.68
UBE3B-208ENST00000538070 SIRT1Q96EB6 747 aa10.78□□□□□ -0.68
UBE3B-208ENST00000538070 FLT4P35916 1363 aa10.77□□□□□ -0.68
UBE3B-208ENST00000538070 KCNQ3O43525 872 aa10.77□□□□□ -0.68
UBE3B-208ENST00000538070 OS9Q13438 667 aaPredicted RBP10.77□□□□□ -0.68
UBE3B-208ENST00000538070 FOXD4L6Q3SYB3 417 aaPredicted RBP10.77□□□□□ -0.68
UBE3B-208ENST00000538070 FOXD4L3Q6VB84 417 aaPredicted RBP10.77□□□□□ -0.68
UBE3B-208ENST00000538070 HMMRO75330 724 aa10.77□□□□□ -0.69
UBE3B-208ENST00000538070 ZNF530Q6P9A1 599 aaPredicted RBP10.77□□□□□ -0.69
UBE3B-208ENST00000538070 CHMP5Q9NZZ3 219 aa10.77□□□□□ -0.69
UBE3B-208ENST00000538070 LRRFIP2Q9Y608 721 aaKnown RBP10.77□□□□□ -0.69
UBE3B-208ENST00000538070 CCDC30Q5VVM6 783 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 NBPF6Q5VWK0 638 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 ANKRD44Q8N8A2 993 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 NBPF4Q96M43 638 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 KIF20BQ96Q89 1820 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 DLC1Q96QB1 1528 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 GNAI2P04899 355 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 CSB-PGBD3P0DP91 1061 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 SDSP20132 328 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 CASC1Q6TDU7 716 aa10.76□□□□□ -0.69
UBE3B-208ENST00000538070 PROSER2Q86WR7 435 aaPredicted RBP10.76□□□□□ -0.69
UBE3B-208ENST00000538070 TTC21AQ8NDW8 1320 aa10.75□□□□□ -0.69
UBE3B-208ENST00000538070 INTS3Q68E01 1043 aaKnown RBP10.75□□□□□ -0.69
UBE3B-208ENST00000538070 NUTM1Q86Y26 1132 aa10.75□□□□□ -0.69
UBE3B-208ENST00000538070 TAF7Q15545 349 aaPredicted RBP10.75□□□□□ -0.69
UBE3B-208ENST00000538070 CDC42BPGQ6DT37 1551 aa10.75□□□□□ -0.69
UBE3B-208ENST00000538070 PIK3R4Q99570 1358 aa10.75□□□□□ -0.69
UBE3B-208ENST00000538070 PNMA6EA0A0J9YXQ4 647 aa10.74□□□□□ -0.69
UBE3B-208ENST00000538070 RPAP2Q8IXW5 612 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-208ENST00000538070 UBTFL1P0CB47 393 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-208ENST00000538070 MCM4P33991 863 aa10.74□□□□□ -0.69
UBE3B-208ENST00000538070 CABLES1Q8TDN4 633 aa10.74□□□□□ -0.69
UBE3B-208ENST00000538070 SBNO1A3KN83 1393 aa10.74□□□□□ -0.69
UBE3B-208ENST00000538070 SURF6O75683 361 aaKnown RBP10.74□□□□□ -0.69
UBE3B-208ENST00000538070 PIP4K2AP48426 406 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-208ENST00000538070 TTC22Q5TAA0 569 aa10.74□□□□□ -0.69
UBE3B-208ENST00000538070 ANTXR1Q9H6X2 564 aa10.74□□□□□ -0.69
UBE3B-208ENST00000538070 NLRP2Q9NX02 1062 aa10.74□□□□□ -0.69
UBE3B-208ENST00000538070 DTNBO60941 627 aa10.73□□□□□ -0.69
UBE3B-208ENST00000538070 CCDC9Q9Y3X0 531 aaKnown RBP10.73□□□□□ -0.69
UBE3B-208ENST00000538070 C1orf141Q5JVX7 400 aa10.73□□□□□ -0.69
UBE3B-208ENST00000538070 ANO2Q9NQ90 1003 aa10.73□□□□□ -0.69
UBE3B-208ENST00000538070 CHPF2Q9P2E5 772 aa10.73□□□□□ -0.69
UBE3B-208ENST00000538070 NRXN3Q9Y4C0 1643 aa10.73□□□□□ -0.69
UBE3B-208ENST00000538070 BTBD11A6QL63 1104 aa10.73□□□□□ -0.69
UBE3B-208ENST00000538070 TRAK2O60296 914 aa10.73□□□□□ -0.69
UBE3B-208ENST00000538070 CCT4P50991 539 aaKnown RBP10.73□□□□□ -0.69
UBE3B-208ENST00000538070 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-208ENST00000538070 JARID2Q92833 1246 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-208ENST00000538070 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-208ENST00000538070 RTL1A6NKG5 1358 aa10.72□□□□□ -0.69
UBE3B-208ENST00000538070 PTPRCP08575 1304 aa10.72□□□□□ -0.69
UBE3B-208ENST00000538070 PTCH1Q13635 1447 aa10.72□□□□□ -0.69
UBE3B-208ENST00000538070 PRAMEF22A3QJZ6 481 aa10.72□□□□□ -0.69
UBE3B-208ENST00000538070 PI4KAP2A4QPH2 592 aa10.72□□□□□ -0.69
UBE3B-208ENST00000538070 PI4KAP1Q8N8J0 262 aa10.72□□□□□ -0.69
UBE3B-208ENST00000538070 OVOS2A0A0J9YW53 1432 aa10.72□□□□□ -0.69
UBE3B-208ENST00000538070 OVOS2Q6IE36 1432 aa10.72□□□□□ -0.69
UBE3B-208ENST00000538070 SSFA2P28290 1259 aa10.71□□□□□ -0.69
UBE3B-208ENST00000538070 SLC39A6Q13433 755 aa10.71□□□□□ -0.69
UBE3B-208ENST00000538070 CHRNA2Q15822 529 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms