RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 AEBP1Q8IUX7 1158 aa9.17□□□□□ -0.94
RNPC3-209ENST00000533834 THUMPD2Q9BTF0 503 aaKnown RBP9.17□□□□□ -0.94
RNPC3-209ENST00000533834 LAMB4A4D0S4 1761 aa9.17□□□□□ -0.94
RNPC3-209ENST00000533834 NUP188Q5SRE5 1749 aa9.16□□□□□ -0.94
RNPC3-209ENST00000533834 KIF16BQ96L93 1317 aa9.16□□□□□ -0.94
RNPC3-209ENST00000533834 BCL11AQ9H165 835 aa9.16□□□□□ -0.94
RNPC3-209ENST00000533834 CEMIPQ8WUJ3 1361 aa9.16□□□□□ -0.94
RNPC3-209ENST00000533834 INTS3Q68E01 1043 aaKnown RBP9.16□□□□□ -0.94
RNPC3-209ENST00000533834 AK9Q5TCS8 1911 aa9.16□□□□□ -0.94
RNPC3-209ENST00000533834 FAM83GA6ND36 823 aa9.16□□□□□ -0.94
RNPC3-209ENST00000533834 NFKBIBQ15653 356 aa9.16□□□□□ -0.94
RNPC3-209ENST00000533834 DDRGK1Q96HY6 314 aa9.16□□□□□ -0.94
RNPC3-209ENST00000533834 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.15□□□□□ -0.94
RNPC3-209ENST00000533834 MAP3K19Q56UN5 1328 aa9.15□□□□□ -0.94
RNPC3-209ENST00000533834 TTC21AQ8NDW8 1320 aa9.15□□□□□ -0.94
RNPC3-209ENST00000533834 RRS1Q15050 365 aaKnown RBP9.15□□□□□ -0.94
RNPC3-209ENST00000533834 DDX19BQ9UMR2 479 aa9.15□□□□□ -0.94
RNPC3-209ENST00000533834 DDX60Q8IY21 1712 aaKnown RBP9.15□□□□□ -0.94
RNPC3-209ENST00000533834 SLC4A3P48751 1232 aa9.15□□□□□ -0.94
RNPC3-209ENST00000533834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.15□□□□□ -0.95
RNPC3-209ENST00000533834 MRC1P22897 1456 aa9.14□□□□□ -0.95
RNPC3-209ENST00000533834 FRAT1Q92837 279 aaPredicted RBP9.14□□□□□ -0.95
RNPC3-209ENST00000533834 HEG1Q9ULI3 1381 aa9.14□□□□□ -0.95
RNPC3-209ENST00000533834 TJP1Q07157 1748 aa9.14□□□□□ -0.95
RNPC3-209ENST00000533834 OVOS2A0A0G2JMS6 1433 aa9.14□□□□□ -0.95
RNPC3-209ENST00000533834 IL17RAQ96F46 866 aa9.14□□□□□ -0.95
RNPC3-209ENST00000533834 TBC1D2Q9BYX2 928 aa9.14□□□□□ -0.95
RNPC3-209ENST00000533834 RGS3P49796 1198 aa9.13□□□□□ -0.95
RNPC3-209ENST00000533834 SMC4Q9NTJ3 1288 aa9.13□□□□□ -0.95
RNPC3-209ENST00000533834 FLT4P35916 1363 aa9.13□□□□□ -0.95
RNPC3-209ENST00000533834 HMOX1P09601 288 aa9.13□□□□□ -0.95
RNPC3-209ENST00000533834 PXDNQ92626 1479 aa9.13□□□□□ -0.95
RNPC3-209ENST00000533834 U2SURPO15042 1029 aaKnown RBP9.12□□□□□ -0.95
RNPC3-209ENST00000533834 GSPT1P15170 499 aaKnown RBP9.12□□□□□ -0.95
RNPC3-209ENST00000533834 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
RNPC3-209ENST00000533834 RWDD1Q9H446 243 aaPredicted RBP9.12□□□□□ -0.95
RNPC3-209ENST00000533834 PNNQ9H307 717 aaKnown RBP9.12□□□□□ -0.95
RNPC3-209ENST00000533834 HSP90AB2PQ58FF8 381 aa9.11□□□□□ -0.95
RNPC3-209ENST00000533834 IBTKQ9P2D0 1353 aaPredicted RBP9.11□□□□□ -0.95
RNPC3-209ENST00000533834 ARFGEF2Q9Y6D5 1785 aa9.11□□□□□ -0.95
RNPC3-209ENST00000533834 NBR1Q14596 966 aa9.11□□□□□ -0.95
RNPC3-209ENST00000533834 BMP2KLQ5H9B9 411 aa9.11□□□□□ -0.95
RNPC3-209ENST00000533834 GNAI1P63096 354 aa9.11□□□□□ -0.95
RNPC3-209ENST00000533834 CEBPAP49715 358 aaPredicted RBP9.1□□□□□ -0.95
RNPC3-209ENST00000533834 KRT24Q2M2I5 525 aa9.1□□□□□ -0.95
RNPC3-209ENST00000533834 NPM2Q86SE8 214 aaKnown RBP9.1□□□□□ -0.95
RNPC3-209ENST00000533834 STRCQ7RTU9 1775 aa9.1□□□□□ -0.95
RNPC3-209ENST00000533834 DCTN1Q14203 1278 aa9.1□□□□□ -0.95
RNPC3-209ENST00000533834 CHD1LQ86WJ1 897 aa9.1□□□□□ -0.95
RNPC3-209ENST00000533834 LAS1LQ9Y4W2 734 aaKnown RBP9.1□□□□□ -0.95
RNPC3-209ENST00000533834 TOGARAM1Q9Y4F4 1720 aa9.1□□□□□ -0.95
RNPC3-209ENST00000533834 SETD1BQ9UPS6 1966 aaKnown RBP9.1□□□□□ -0.95
RNPC3-209ENST00000533834 WNK3Q9BYP7 1800 aa9.09□□□□□ -0.95
RNPC3-209ENST00000533834 PPM1GO15355 546 aaPredicted RBP9.09□□□□□ -0.95
RNPC3-209ENST00000533834 CD2BP2O95400 341 aaKnown RBP9.09□□□□□ -0.95
RNPC3-209ENST00000533834 SNX21Q969T3 373 aa9.09□□□□□ -0.95
RNPC3-209ENST00000533834 COG3Q96JB2 828 aa9.09□□□□□ -0.95
RNPC3-209ENST00000533834 DCTPP1Q9H773 170 aa9.09□□□□□ -0.95
RNPC3-209ENST00000533834 AMOTL2Q9Y2J4 779 aa9.09□□□□□ -0.95
RNPC3-209ENST00000533834 MTHFSDQ2M296 383 aaKnown RBP9.09□□□□□ -0.95
RNPC3-209ENST00000533834 TWISTNBQ3B726 338 aaPredicted RBP9.09□□□□□ -0.95
RNPC3-209ENST00000533834 FRAT2O75474 233 aaPredicted RBP9.08□□□□□ -0.96
RNPC3-209ENST00000533834 CLEC17AQ6ZS10 378 aa9.08□□□□□ -0.96
RNPC3-209ENST00000533834 NHSL1Q5SYE7 1610 aa9.08□□□□□ -0.96
RNPC3-209ENST00000533834 MLECQ14165 292 aa9.08□□□□□ -0.96
RNPC3-209ENST00000533834 EYA1Q99502 592 aa9.08□□□□□ -0.96
RNPC3-209ENST00000533834 FOXO3O43524 673 aa9.07□□□□□ -0.96
RNPC3-209ENST00000533834 PLEKHM2Q8IWE5 1019 aa9.07□□□□□ -0.96
RNPC3-209ENST00000533834 CEP85Q6P2H3 762 aa9.07□□□□□ -0.96
RNPC3-209ENST00000533834 GCC1Q96CN9 775 aa9.07□□□□□ -0.96
RNPC3-209ENST00000533834 PTPRCP08575 1304 aa9.07□□□□□ -0.96
RNPC3-209ENST00000533834 FSD2A1L4K1 749 aa9.07□□□□□ -0.96
RNPC3-209ENST00000533834 NEFMP07197 916 aa9.07□□□□□ -0.96
RNPC3-209ENST00000533834 ANKRD44Q8N8A2 993 aa9.07□□□□□ -0.96
RNPC3-209ENST00000533834 HOXC9P31274 260 aa9.06□□□□□ -0.96
RNPC3-209ENST00000533834 ITPRIPQ8IWB1 547 aa9.06□□□□□ -0.96
RNPC3-209ENST00000533834 OSBPL3Q9H4L5 887 aa9.06□□□□□ -0.96
RNPC3-209ENST00000533834 KCNA6P17658 529 aa9.06□□□□□ -0.96
RNPC3-209ENST00000533834 HTATSF1O43719 755 aaKnown RBP9.06□□□□□ -0.96
RNPC3-209ENST00000533834 SULT6B1Q6IMI4 303 aa9.06□□□□□ -0.96
RNPC3-209ENST00000533834 ABCB7O75027 752 aa9.05□□□□□ -0.96
RNPC3-209ENST00000533834 U3KPZ7 1027 aaPredicted RBP9.05□□□□□ -0.96
RNPC3-209ENST00000533834 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
RNPC3-209ENST00000533834 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
RNPC3-209ENST00000533834 CALD1Q05682 793 aaKnown RBP9.05□□□□□ -0.96
RNPC3-209ENST00000533834 MCM10Q7L590 875 aa9.05□□□□□ -0.96
RNPC3-209ENST00000533834 SLC26A8Q96RN1 970 aa9.05□□□□□ -0.96
RNPC3-209ENST00000533834 CYP2E1P05181 493 aaPredicted RBP9.04□□□□□ -0.96
RNPC3-209ENST00000533834 IPO8O15397 1037 aaKnown RBP9.04□□□□□ -0.96
RNPC3-209ENST00000533834 HDGFP51858 240 aaKnown RBP9.04□□□□□ -0.96
RNPC3-209ENST00000533834 G2E3Q7L622 706 aa9.04□□□□□ -0.96
RNPC3-209ENST00000533834 IL17REQ8NFR9 667 aa9.04□□□□□ -0.96
RNPC3-209ENST00000533834 LMOD3Q0VAK6 560 aa9.04□□□□□ -0.96
RNPC3-209ENST00000533834 TBC1D9Q6ZT07 1266 aa9.04□□□□□ -0.96
RNPC3-209ENST00000533834 C1orf115Q9H7X2 142 aa9.04□□□□□ -0.96
RNPC3-209ENST00000533834 BABAM1Q9NWV8 329 aa9.04□□□□□ -0.96
RNPC3-209ENST00000533834 SOS1Q07889 1333 aaPredicted RBP9.04□□□□□ -0.96
RNPC3-209ENST00000533834 GSE1Q14687 1217 aa9.03□□□□□ -0.96
RNPC3-209ENST00000533834 FTSJ3Q8IY81 847 aaKnown RBP9.03□□□□□ -0.96
RNPC3-209ENST00000533834 MYH15Q9Y2K3 1946 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms