RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 FAM135AQ9P2D6 1515 aa18.25■□□□□ 0.51
PCDHA4-203ENST00000530339 ESCO1Q5FWF5 840 aa18.24■□□□□ 0.51
PCDHA4-203ENST00000530339 STK3Q13188 491 aa18.24■□□□□ 0.51
PCDHA4-203ENST00000530339 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
PCDHA4-203ENST00000530339 MAP3K11Q16584 847 aa18.24■□□□□ 0.51
PCDHA4-203ENST00000530339 TBC1D32Q96NH3 1257 aa18.23■□□□□ 0.51
PCDHA4-203ENST00000530339 SSFA2P28290 1259 aa18.23■□□□□ 0.51
PCDHA4-203ENST00000530339 TTC39AQ5SRH9 613 aa18.23■□□□□ 0.51
PCDHA4-203ENST00000530339 CTNNA3Q9UI47 895 aa18.23■□□□□ 0.51
PCDHA4-203ENST00000530339 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
PCDHA4-203ENST00000530339 RAB11FIP3O75154 756 aa18.23■□□□□ 0.51
PCDHA4-203ENST00000530339 NACAP1Q9BZK3 213 aa18.23■□□□□ 0.51
PCDHA4-203ENST00000530339 JAKMIP1Q96N16 626 aaKnown RBP18.23■□□□□ 0.51
PCDHA4-203ENST00000530339 PLEKHH1Q9ULM0 1364 aa18.23■□□□□ 0.51
PCDHA4-203ENST00000530339 CDKL5O76039 1030 aa18.22■□□□□ 0.51
PCDHA4-203ENST00000530339 ZNF530Q6P9A1 599 aaPredicted RBP18.22■□□□□ 0.51
PCDHA4-203ENST00000530339 CCDC61Q9Y6R9 512 aa18.22■□□□□ 0.51
PCDHA4-203ENST00000530339 MYO6Q9UM54 1294 aa18.22■□□□□ 0.51
PCDHA4-203ENST00000530339 CBFA2T2O43439 604 aa18.22■□□□□ 0.51
PCDHA4-203ENST00000530339 FILIP1Q7Z7B0 1213 aa18.22■□□□□ 0.51
PCDHA4-203ENST00000530339 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
PCDHA4-203ENST00000530339 MCM5P33992 734 aa18.21■□□□□ 0.51
PCDHA4-203ENST00000530339 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.51
PCDHA4-203ENST00000530339 XPCQ01831 940 aaPredicted RBP18.21■□□□□ 0.51
PCDHA4-203ENST00000530339 CCDC183Q5T5S1 534 aa18.21■□□□□ 0.51
PCDHA4-203ENST00000530339 TRIM22Q8IYM9 498 aa18.21■□□□□ 0.51
PCDHA4-203ENST00000530339 TXLNBQ8N3L3 684 aa18.21■□□□□ 0.51
PCDHA4-203ENST00000530339 ERLIN1O75477 346 aa18.21■□□□□ 0.51
PCDHA4-203ENST00000530339 OFD1O75665 1012 aa18.21■□□□□ 0.5
PCDHA4-203ENST00000530339 MAP4K4O95819 1239 aaPredicted RBP18.21■□□□□ 0.5
PCDHA4-203ENST00000530339 ATP2B1P20020 1258 aa18.21■□□□□ 0.5
PCDHA4-203ENST00000530339 TAF3Q5VWG9 929 aa18.2■□□□□ 0.5
PCDHA4-203ENST00000530339 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
PCDHA4-203ENST00000530339 KCNH5Q8NCM2 988 aa18.2■□□□□ 0.5
PCDHA4-203ENST00000530339 GRIN2AQ12879 1464 aa18.2■□□□□ 0.5
PCDHA4-203ENST00000530339 DCTN1Q14203 1278 aa18.2■□□□□ 0.5
PCDHA4-203ENST00000530339 KIF2AO00139 706 aaPredicted RBP18.2■□□□□ 0.5
PCDHA4-203ENST00000530339 SRGAP3O43295 1099 aa18.2■□□□□ 0.5
PCDHA4-203ENST00000530339 CWC27Q6UX04 472 aaKnown RBP18.19■□□□□ 0.5
PCDHA4-203ENST00000530339 EIF3JO75822 258 aaKnown RBP18.19■□□□□ 0.5
PCDHA4-203ENST00000530339 AXDND1Q5T1B0 1012 aaPredicted RBP18.19■□□□□ 0.5
PCDHA4-203ENST00000530339 EPS15P42566 896 aa18.19■□□□□ 0.5
PCDHA4-203ENST00000530339 PPFIBP1Q86W92 1011 aa18.19■□□□□ 0.5
PCDHA4-203ENST00000530339 UPF3BQ9BZI7 483 aaKnown RBP18.19■□□□□ 0.5
PCDHA4-203ENST00000530339 MAGEC2Q9UBF1 373 aaPredicted RBP18.19■□□□□ 0.5
PCDHA4-203ENST00000530339 CABP4P57796 275 aa18.19■□□□□ 0.5
PCDHA4-203ENST00000530339 IL1RAPL2Q9NP60 686 aa18.18■□□□□ 0.5
PCDHA4-203ENST00000530339 BRPF1P55201 1214 aaPredicted RBP18.18■□□□□ 0.5
PCDHA4-203ENST00000530339 CLCN1P35523 988 aa18.18■□□□□ 0.5
PCDHA4-203ENST00000530339 BMP2KLQ5H9B9 411 aa18.18■□□□□ 0.5
PCDHA4-203ENST00000530339 GNAT3A8MTJ3 354 aa18.17■□□□□ 0.5
PCDHA4-203ENST00000530339 RDXP35241 583 aaKnown RBP18.17■□□□□ 0.5
PCDHA4-203ENST00000530339 KLHL40Q2TBA0 621 aa18.17■□□□□ 0.5
PCDHA4-203ENST00000530339 CNNM1Q9NRU3 951 aa18.17■□□□□ 0.5
PCDHA4-203ENST00000530339 EXOC6BQ9Y2D4 811 aa18.17■□□□□ 0.5
PCDHA4-203ENST00000530339 IGHDP01880 384 aa18.17■□□□□ 0.5
PCDHA4-203ENST00000530339 MX1P20591 662 aa18.17■□□□□ 0.5
PCDHA4-203ENST00000530339 UBXN4Q92575 508 aa18.17■□□□□ 0.5
PCDHA4-203ENST00000530339 KDM4AO75164 1064 aa18.16■□□□□ 0.5
PCDHA4-203ENST00000530339 CASTP20810 708 aaKnown RBP18.16■□□□□ 0.5
PCDHA4-203ENST00000530339 KIF1BPQ96EK5 621 aa18.16■□□□□ 0.5
PCDHA4-203ENST00000530339 WASF1Q92558 559 aa18.16■□□□□ 0.5
PCDHA4-203ENST00000530339 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
PCDHA4-203ENST00000530339 TRIM27P14373 513 aa18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 AACSQ86V21 672 aa18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 CCAR1Q8IX12 1150 aaKnown RBP18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 LUC7LQ9NQ29 371 aaKnown RBP18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 ZNHIT6Q9NWK9 470 aaKnown RBP18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 IL16Q14005 1332 aa18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 BAG4O95429 457 aaKnown RBP18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 SCAND2PQ9GZW5 306 aaPredicted RBP18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 SMTNL1A8MU46 457 aa18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 PTPN14Q15678 1187 aa18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 STIM1Q13586 685 aa18.15■□□□□ 0.5
PCDHA4-203ENST00000530339 FAM177A1Q8N128 213 aaPredicted RBP18.14■□□□□ 0.5
PCDHA4-203ENST00000530339 NOL7Q9UMY1 257 aaKnown RBP18.14■□□□□ 0.5
PCDHA4-203ENST00000530339 GLRX3O76003 335 aaKnown RBP18.14■□□□□ 0.49
PCDHA4-203ENST00000530339 CCDC57Q2TAC2 916 aa18.14■□□□□ 0.49
PCDHA4-203ENST00000530339 CDK5RAP3Q96JB5 506 aa18.14■□□□□ 0.49
PCDHA4-203ENST00000530339 TSPYL1Q9H0U9 437 aa18.14■□□□□ 0.49
PCDHA4-203ENST00000530339 UBE2Q2Q8WVN8 375 aa18.14■□□□□ 0.49
PCDHA4-203ENST00000530339 BTBD11A6QL63 1104 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 CBX1P83916 185 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 SIL1Q9H173 461 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 USP25Q9UHP3 1055 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 ADGRL1O94910 1474 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 CCDC191Q8NCU4 936 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 NUP160Q12769 1436 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 PTPRCP08575 1304 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 CT47A1Q5JQC4 288 aaPredicted RBP18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 CCDC83Q8IWF9 413 aa18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 SH2B1Q9NRF2 756 aaPredicted RBP18.13■□□□□ 0.49
PCDHA4-203ENST00000530339 XRCC6P12956 609 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCDHA4-203ENST00000530339 CCDC69A6NI79 296 aa18.12■□□□□ 0.49
PCDHA4-203ENST00000530339 CAMK4Q16566 473 aa18.12■□□□□ 0.49
PCDHA4-203ENST00000530339 TBC1D9Q6ZT07 1266 aa18.12■□□□□ 0.49
PCDHA4-203ENST00000530339 TMCO3Q6UWJ1 677 aa18.12■□□□□ 0.49
PCDHA4-203ENST00000530339 KIF18AQ8NI77 898 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms