RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 C22orf23Q9BZE7 217 aa10.1□□□□□ -0.79
CTNND1-225ENST00000530094 ARGLU1Q9NWB6 273 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-225ENST00000530094 MCM10Q7L590 875 aa10.09□□□□□ -0.79
CTNND1-225ENST00000530094 THUMPD2Q9BTF0 503 aaKnown RBP10.09□□□□□ -0.79
CTNND1-225ENST00000530094 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
CTNND1-225ENST00000530094 CCP110O43303 1012 aa10.09□□□□□ -0.79
CTNND1-225ENST00000530094 FBLN1P23142 703 aa10.09□□□□□ -0.79
CTNND1-225ENST00000530094 NAP1L1P55209 391 aaKnown RBP10.09□□□□□ -0.79
CTNND1-225ENST00000530094 DNAJC5Q9H3Z4 198 aa10.09□□□□□ -0.79
CTNND1-225ENST00000530094 DCTN1Q14203 1278 aa10.09□□□□□ -0.79
CTNND1-225ENST00000530094 GSE1Q14687 1217 aa10.09□□□□□ -0.79
CTNND1-225ENST00000530094 ANKRD1Q15327 319 aa10.09□□□□□ -0.79
CTNND1-225ENST00000530094 SURF6O75683 361 aaKnown RBP10.09□□□□□ -0.79
CTNND1-225ENST00000530094 FOXD4L6Q3SYB3 417 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-225ENST00000530094 FOXD4L3Q6VB84 417 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-225ENST00000530094 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-225ENST00000530094 TMEM132AQ24JP5 1023 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 NEO1Q92859 1461 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 LNPKQ9C0E8 428 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 FILIP1LQ4L180 1135 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-225ENST00000530094 ANKRD24Q8TF21 1146 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 SMARCE1Q969G3 411 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 MAGEC2Q9UBF1 373 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-225ENST00000530094 ZFYVE16Q7Z3T8 1539 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 NFE2L2Q16236 605 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 TXLNBQ8N3L3 684 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 STARD3NLO95772 234 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
CTNND1-225ENST00000530094 YEATS2Q9ULM3 1422 aa10.07□□□□□ -0.8
CTNND1-225ENST00000530094 CFAP43Q8NDM7 1665 aa10.07□□□□□ -0.8
CTNND1-225ENST00000530094 DNAJC2Q99543 621 aaKnown RBP10.07□□□□□ -0.8
CTNND1-225ENST00000530094 SRCIN1Q9C0H9 1055 aa10.07□□□□□ -0.8
CTNND1-225ENST00000530094 TCOF1Q13428 1488 aaKnown RBP10.07□□□□□ -0.8
CTNND1-225ENST00000530094 AMER1Q5JTC6 1135 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-225ENST00000530094 ZNF592Q92610 1267 aa10.07□□□□□ -0.8
CTNND1-225ENST00000530094 ERCC4Q92889 916 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-225ENST00000530094 AMOTQ4VCS5 1084 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 HSP90AB2PQ58FF8 381 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 DACH1Q9UI36 760 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 MBD3O95983 291 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 TMPOP42166 694 aaKnown RBP10.06□□□□□ -0.8
CTNND1-225ENST00000530094 PDE3AQ14432 1141 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 SYCP1Q15431 976 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 WDR63Q8IWG1 891 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 MNS1Q8NEH6 495 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 TBX22Q9Y458 520 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 DISP3Q9P2K9 1392 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 RABEP1Q15276 862 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 SDF4Q9BRK5 362 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 PPIP5K1Q6PFW1 1433 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 SHANK2Q9UPX8 1470 aa10.06□□□□□ -0.8
CTNND1-225ENST00000530094 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-225ENST00000530094 PDIA4P13667 645 aaKnown RBP10.05□□□□□ -0.8
CTNND1-225ENST00000530094 TTC21BQ7Z4L5 1316 aa10.05□□□□□ -0.8
CTNND1-225ENST00000530094 SAMD9Q5K651 1589 aa10.05□□□□□ -0.8
CTNND1-225ENST00000530094 KRT18P05783 430 aaKnown RBP10.05□□□□□ -0.8
CTNND1-225ENST00000530094 C1orf115Q9H7X2 142 aa10.05□□□□□ -0.8
CTNND1-225ENST00000530094 NOB1Q9ULX3 412 aaKnown RBP10.05□□□□□ -0.8
CTNND1-225ENST00000530094 CCDC85AQ96PX6 553 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-225ENST00000530094 CFAP65Q6ZU64 1925 aaKnown RBP10.05□□□□□ -0.8
CTNND1-225ENST00000530094 KINO60870 393 aaKnown RBP10.05□□□□□ -0.8
CTNND1-225ENST00000530094 LUC7LQ9NQ29 371 aaKnown RBP10.05□□□□□ -0.8
CTNND1-225ENST00000530094 CCDC39Q9UFE4 941 aa10.05□□□□□ -0.8
CTNND1-225ENST00000530094 ZPR1O75312 459 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 CDKL5O76039 1030 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 CCDC57Q2TAC2 916 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 MPHOSPH8Q99549 860 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 SOGA3Q5TF21 947 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 LRRC59Q96AG4 307 aaKnown RBP10.04□□□□□ -0.8
CTNND1-225ENST00000530094 ARID3AQ99856 593 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 FANCIQ9NVI1 1328 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 STIM1Q13586 685 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 CTNNA3Q9UI47 895 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 RRP12Q5JTH9 1297 aaKnown RBP10.04□□□□□ -0.8
CTNND1-225ENST00000530094 BCL11BQ9C0K0 894 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-225ENST00000530094 NOL7Q9UMY1 257 aaKnown RBP10.04□□□□□ -0.8
CTNND1-225ENST00000530094 SIL1Q9H173 461 aa10.04□□□□□ -0.8
CTNND1-225ENST00000530094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTNND1-225ENST00000530094 CCDC69A6NI79 296 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 ZFYVE27Q5T4F4 411 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 ACSBG1Q96GR2 724 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 LRRCC1Q9C099 1032 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 ZRANB1Q9UGI0 708 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 ZNF652Q9Y2D9 606 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 FOSBP53539 338 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 HSP90B2PQ58FF3 399 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 DNAI2Q9GZS0 605 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 CYP46A1Q9Y6A2 500 aa10.03□□□□□ -0.8
CTNND1-225ENST00000530094 ERCC6L2Q5T890 1561 aa10.02□□□□□ -0.8
CTNND1-225ENST00000530094 TTC21AQ8NDW8 1320 aa10.02□□□□□ -0.8
CTNND1-225ENST00000530094 TAF7Q15545 349 aaPredicted RBP10.02□□□□□ -0.8
CTNND1-225ENST00000530094 IFNL2Q8IZJ0 200 aa10.02□□□□□ -0.8
CTNND1-225ENST00000530094 CAGE1Q8TC20 777 aa10.02□□□□□ -0.8
CTNND1-225ENST00000530094 BCAR3O75815 825 aa10.02□□□□□ -0.81
CTNND1-225ENST00000530094 ZNF287Q9HBT7 754 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms