RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 TXNDC2Q86VQ3 553 aa12.74□□□□□ -0.37
MSRA-210ENST00000528246 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
MSRA-210ENST00000528246 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
MSRA-210ENST00000528246 RRAGDQ9NQL2 400 aaPredicted RBP12.74□□□□□ -0.37
MSRA-210ENST00000528246 STRCP1A6NGW2 1772 aa12.73□□□□□ -0.37
MSRA-210ENST00000528246 HDGFP51858 240 aaKnown RBP12.72□□□□□ -0.37
MSRA-210ENST00000528246 NUCB2P80303 420 aa12.72□□□□□ -0.37
MSRA-210ENST00000528246 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
MSRA-210ENST00000528246 COG3Q96JB2 828 aa12.72□□□□□ -0.37
MSRA-210ENST00000528246 CWC22Q9HCG8 908 aaKnown RBP12.72□□□□□ -0.37
MSRA-210ENST00000528246 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
MSRA-210ENST00000528246 CCDC61Q9Y6R9 512 aa12.72□□□□□ -0.37
MSRA-210ENST00000528246 ATP10DQ9P241 1426 aa12.72□□□□□ -0.37
MSRA-210ENST00000528246 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
MSRA-210ENST00000528246 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.37
MSRA-210ENST00000528246 NALCNQ8IZF0 1738 aa12.71□□□□□ -0.37
MSRA-210ENST00000528246 TTC22Q5TAA0 569 aa12.71□□□□□ -0.38
MSRA-210ENST00000528246 PLEKHM2Q8IWE5 1019 aa12.71□□□□□ -0.38
MSRA-210ENST00000528246 TSPYL6Q8N831 410 aa12.71□□□□□ -0.38
MSRA-210ENST00000528246 SLIT1O75093 1534 aa12.71□□□□□ -0.38
MSRA-210ENST00000528246 RGS12O14924 1447 aa12.7□□□□□ -0.38
MSRA-210ENST00000528246 ARHGAP23Q9P227 1491 aa12.7□□□□□ -0.38
MSRA-210ENST00000528246 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
MSRA-210ENST00000528246 TOPAZ1Q8N9V7 1692 aa12.7□□□□□ -0.38
MSRA-210ENST00000528246 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
MSRA-210ENST00000528246 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
MSRA-210ENST00000528246 CHL1O00533 1208 aa12.69□□□□□ -0.38
MSRA-210ENST00000528246 HSP90AA1P07900 732 aaKnown RBP12.69□□□□□ -0.38
MSRA-210ENST00000528246 OSBPL3Q9H4L5 887 aa12.69□□□□□ -0.38
MSRA-210ENST00000528246 SOS1Q07889 1333 aaPredicted RBP12.69□□□□□ -0.38
MSRA-210ENST00000528246 EPB41L2O43491 1005 aaKnown RBP12.68□□□□□ -0.38
MSRA-210ENST00000528246 CYP2E1P05181 493 aaPredicted RBP12.68□□□□□ -0.38
MSRA-210ENST00000528246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.68□□□□□ -0.38
MSRA-210ENST00000528246 C8orf58Q8NAV2 365 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 EMILIN1Q9Y6C2 1016 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 TTC21BQ7Z4L5 1316 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 RTL1A6NKG5 1358 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 REC8O95072 547 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 HMOX1P09601 288 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
MSRA-210ENST00000528246 CCDC173Q0VFZ6 552 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 HS1BP3Q53T59 392 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 PPP1R9BQ96SB3 815 aa12.68□□□□□ -0.38
MSRA-210ENST00000528246 USP31Q70CQ4 1352 aa12.67□□□□□ -0.38
MSRA-210ENST00000528246 ZNF445P59923 1031 aa12.67□□□□□ -0.38
MSRA-210ENST00000528246 NUDT16Q96DE0 195 aaKnown RBP12.67□□□□□ -0.38
MSRA-210ENST00000528246 USP26Q9BXU7 913 aa12.67□□□□□ -0.38
MSRA-210ENST00000528246 ESPNB1AK53 854 aa12.66□□□□□ -0.38
MSRA-210ENST00000528246 HMMRO75330 724 aa12.66□□□□□ -0.38
MSRA-210ENST00000528246 IL17RAQ96F46 866 aa12.66□□□□□ -0.38
MSRA-210ENST00000528246 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
MSRA-210ENST00000528246 GZF1Q9H116 711 aaPredicted RBP12.66□□□□□ -0.38
MSRA-210ENST00000528246 ST18O60284 1047 aa12.65□□□□□ -0.38
MSRA-210ENST00000528246 BAG4O95429 457 aaKnown RBP12.65□□□□□ -0.38
MSRA-210ENST00000528246 MCM2P49736 904 aa12.65□□□□□ -0.38
MSRA-210ENST00000528246 CEP85Q6P2H3 762 aa12.65□□□□□ -0.38
MSRA-210ENST00000528246 WAPLQ7Z5K2 1190 aa12.65□□□□□ -0.38
MSRA-210ENST00000528246 NME9Q86XW9 330 aa12.65□□□□□ -0.38
MSRA-210ENST00000528246 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
MSRA-210ENST00000528246 CD2BP2O95400 341 aaKnown RBP12.65□□□□□ -0.38
MSRA-210ENST00000528246 KLHL34Q8N239 644 aa12.65□□□□□ -0.38
MSRA-210ENST00000528246 UBE2Q2Q8WVN8 375 aa12.65□□□□□ -0.38
MSRA-210ENST00000528246 TRIM44Q96DX7 344 aaPredicted RBP12.65□□□□□ -0.38
MSRA-210ENST00000528246 SLC26A8Q96RN1 970 aa12.65□□□□□ -0.38
MSRA-210ENST00000528246 THUMPD2Q9BTF0 503 aaKnown RBP12.65□□□□□ -0.38
MSRA-210ENST00000528246 N4BP2Q86UW6 1770 aaPredicted RBP12.64□□□□□ -0.39
MSRA-210ENST00000528246 GAS2L2Q8NHY3 880 aa12.64□□□□□ -0.39
MSRA-210ENST00000528246 ANP32BQ92688 251 aaKnown RBP12.64□□□□□ -0.39
MSRA-210ENST00000528246 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
MSRA-210ENST00000528246 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
MSRA-210ENST00000528246 METP08581 1390 aa12.64□□□□□ -0.39
MSRA-210ENST00000528246 CRB1P82279 1406 aa12.64□□□□□ -0.39
MSRA-210ENST00000528246 XIRP1Q702N8 1843 aaKnown RBP12.64□□□□□ -0.39
MSRA-210ENST00000528246 CCT4P50991 539 aaKnown RBP12.63□□□□□ -0.39
MSRA-210ENST00000528246 POTEAQ6S8J7 498 aa12.63□□□□□ -0.39
MSRA-210ENST00000528246 SSH2Q76I76 1423 aa12.63□□□□□ -0.39
MSRA-210ENST00000528246 KDRP35968 1356 aa12.62□□□□□ -0.39
MSRA-210ENST00000528246 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
MSRA-210ENST00000528246 TERF1P54274 439 aa12.62□□□□□ -0.39
MSRA-210ENST00000528246 BABAM1Q9NWV8 329 aa12.62□□□□□ -0.39
MSRA-210ENST00000528246 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
MSRA-210ENST00000528246 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
MSRA-210ENST00000528246 ANAPC15P60006 121 aa12.62□□□□□ -0.39
MSRA-210ENST00000528246 EIF4A2Q14240 407 aaKnown RBP12.62□□□□□ -0.39
MSRA-210ENST00000528246 LRRC37A3O60309 1634 aa12.61□□□□□ -0.39
MSRA-210ENST00000528246 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
MSRA-210ENST00000528246 USP6P35125 1406 aa12.61□□□□□ -0.39
MSRA-210ENST00000528246 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
MSRA-210ENST00000528246 ERC2O15083 957 aa12.61□□□□□ -0.39
MSRA-210ENST00000528246 SDSP20132 328 aa12.61□□□□□ -0.39
MSRA-210ENST00000528246 SSFA2P28290 1259 aa12.61□□□□□ -0.39
MSRA-210ENST00000528246 GAS2L3Q86XJ1 694 aa12.61□□□□□ -0.39
MSRA-210ENST00000528246 MSH6P52701 1360 aa12.6□□□□□ -0.39
MSRA-210ENST00000528246 AOX1Q06278 1338 aa12.6□□□□□ -0.39
MSRA-210ENST00000528246 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
MSRA-210ENST00000528246 DDX49Q9Y6V7 483 aaKnown RBP12.6□□□□□ -0.39
MSRA-210ENST00000528246 TUBGCP6Q96RT7 1819 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms