RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 MVPQ14764 893 aaKnown RBP17.24■□□□□ 0.35
PCDHA2-202ENST00000520672 TMEM57Q8N5G2 664 aa17.24■□□□□ 0.35
PCDHA2-202ENST00000520672 ZBTB22O15209 634 aa17.24■□□□□ 0.35
PCDHA2-202ENST00000520672 ATF7IPQ6VMQ6 1270 aa17.24■□□□□ 0.35
PCDHA2-202ENST00000520672 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
PCDHA2-202ENST00000520672 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
PCDHA2-202ENST00000520672 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
PCDHA2-202ENST00000520672 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
PCDHA2-202ENST00000520672 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
PCDHA2-202ENST00000520672 UPF2Q9HAU5 1272 aaKnown RBP17.22■□□□□ 0.35
PCDHA2-202ENST00000520672 ADGRB2O60241 1585 aa17.21■□□□□ 0.35
PCDHA2-202ENST00000520672 ARHGAP23Q9P227 1491 aa17.21■□□□□ 0.35
PCDHA2-202ENST00000520672 GNAI1P63096 354 aa17.21■□□□□ 0.35
PCDHA2-202ENST00000520672 TBC1D2Q9BYX2 928 aa17.21■□□□□ 0.35
PCDHA2-202ENST00000520672 C1orf115Q9H7X2 142 aa17.21■□□□□ 0.35
PCDHA2-202ENST00000520672 PSME1Q06323 249 aa17.2■□□□□ 0.34
PCDHA2-202ENST00000520672 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
PCDHA2-202ENST00000520672 ANTXR1Q9H6X2 564 aa17.2■□□□□ 0.34
PCDHA2-202ENST00000520672 RIMS1Q86UR5 1692 aaKnown RBP17.2■□□□□ 0.34
PCDHA2-202ENST00000520672 IL16Q14005 1332 aa17.2■□□□□ 0.34
PCDHA2-202ENST00000520672 TRAK2O60296 914 aa17.19■□□□□ 0.34
PCDHA2-202ENST00000520672 VAMP4O75379 141 aa17.19■□□□□ 0.34
PCDHA2-202ENST00000520672 DMTNQ08495 405 aa17.19■□□□□ 0.34
PCDHA2-202ENST00000520672 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
PCDHA2-202ENST00000520672 SLIT1O75093 1534 aa17.19■□□□□ 0.34
PCDHA2-202ENST00000520672 CDK12Q9NYV4 1490 aaPredicted RBP17.19■□□□□ 0.34
PCDHA2-202ENST00000520672 NCLP19338 710 aaKnown RBP17.19■□□□□ 0.34
PCDHA2-202ENST00000520672 MAP7D2Q96T17 732 aa17.19■□□□□ 0.34
PCDHA2-202ENST00000520672 ORAI2Q96SN7 254 aa17.18■□□□□ 0.34
PCDHA2-202ENST00000520672 EYA1Q99502 592 aa17.18■□□□□ 0.34
PCDHA2-202ENST00000520672 PDZRN3Q9UPQ7 1066 aa17.18■□□□□ 0.34
PCDHA2-202ENST00000520672 RGPD8O14715 1765 aaPredicted RBP17.18■□□□□ 0.34
PCDHA2-202ENST00000520672 ITSN1Q15811 1721 aa17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 UQCRHLA0A096LP55 91 aa17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 UQCRHP07919 91 aa17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 MCM4P33991 863 aa17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 ZSCAN20P17040 1043 aaPredicted RBP17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 LMOD3Q0VAK6 560 aa17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 CFAP44Q96MT7 982 aa17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 RWDD1Q9H446 243 aaPredicted RBP17.17■□□□□ 0.34
PCDHA2-202ENST00000520672 SETD1BQ9UPS6 1966 aaKnown RBP17.16■□□□□ 0.34
PCDHA2-202ENST00000520672 CT47B1P0C2W7 299 aaPredicted RBP17.16■□□□□ 0.34
PCDHA2-202ENST00000520672 MTHFSDQ2M296 383 aaKnown RBP17.16■□□□□ 0.34
PCDHA2-202ENST00000520672 CHMP4AQ9BY43 222 aa17.16■□□□□ 0.34
PCDHA2-202ENST00000520672 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
PCDHA2-202ENST00000520672 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
PCDHA2-202ENST00000520672 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
PCDHA2-202ENST00000520672 ZFP91Q96JP5 570 aaPredicted RBP17.16■□□□□ 0.34
PCDHA2-202ENST00000520672 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
PCDHA2-202ENST00000520672 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
PCDHA2-202ENST00000520672 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
PCDHA2-202ENST00000520672 CEP170BQ9Y4F5 1589 aaPredicted RBP17.15■□□□□ 0.34
PCDHA2-202ENST00000520672 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
PCDHA2-202ENST00000520672 OFD1O75665 1012 aa17.15■□□□□ 0.34
PCDHA2-202ENST00000520672 DDX19BQ9UMR2 479 aa17.15■□□□□ 0.34
PCDHA2-202ENST00000520672 KIF16BQ96L93 1317 aa17.14■□□□□ 0.34
PCDHA2-202ENST00000520672 PROSER2Q86WR7 435 aaPredicted RBP17.14■□□□□ 0.33
PCDHA2-202ENST00000520672 MON2Q7Z3U7 1717 aa17.14■□□□□ 0.33
PCDHA2-202ENST00000520672 IGSF3O75054 1194 aa17.14■□□□□ 0.33
PCDHA2-202ENST00000520672 MSNP26038 577 aaKnown RBP17.14■□□□□ 0.33
PCDHA2-202ENST00000520672 PTCH1Q13635 1447 aa17.13■□□□□ 0.33
PCDHA2-202ENST00000520672 CBX1P83916 185 aa17.13■□□□□ 0.33
PCDHA2-202ENST00000520672 CDK11BP21127 795 aaKnown RBP17.12■□□□□ 0.33
PCDHA2-202ENST00000520672 HSPA2P54652 639 aa17.12■□□□□ 0.33
PCDHA2-202ENST00000520672 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
PCDHA2-202ENST00000520672 HOXC9P31274 260 aa17.12■□□□□ 0.33
PCDHA2-202ENST00000520672 MFAP1P55081 439 aaKnown RBP17.12■□□□□ 0.33
PCDHA2-202ENST00000520672 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.12■□□□□ 0.33
PCDHA2-202ENST00000520672 GAS2L3Q86XJ1 694 aa17.12■□□□□ 0.33
PCDHA2-202ENST00000520672 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
PCDHA2-202ENST00000520672 AKAP12Q02952 1782 aa17.11■□□□□ 0.33
PCDHA2-202ENST00000520672 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
PCDHA2-202ENST00000520672 FLT4P35916 1363 aa17.11■□□□□ 0.33
PCDHA2-202ENST00000520672 ALDH1L2Q3SY69 923 aa17.1■□□□□ 0.33
PCDHA2-202ENST00000520672 UTP14CQ5TAP6 766 aaKnown RBP17.1■□□□□ 0.33
PCDHA2-202ENST00000520672 TSPYL4Q9UJ04 414 aa17.1■□□□□ 0.33
PCDHA2-202ENST00000520672 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
PCDHA2-202ENST00000520672 HAP1P54257 671 aaPredicted RBP17.09■□□□□ 0.33
PCDHA2-202ENST00000520672 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
PCDHA2-202ENST00000520672 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
PCDHA2-202ENST00000520672 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
PCDHA2-202ENST00000520672 LNPKQ9C0E8 428 aa17.09■□□□□ 0.33
PCDHA2-202ENST00000520672 CGNQ9P2M7 1197 aaKnown RBP17.08■□□□□ 0.33
PCDHA2-202ENST00000520672 SBNO1A3KN83 1393 aa17.08■□□□□ 0.33
PCDHA2-202ENST00000520672 VIRMAQ69YN4 1812 aaKnown RBP17.08■□□□□ 0.33
PCDHA2-202ENST00000520672 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.32
PCDHA2-202ENST00000520672 ZSCAN30Q86W11 494 aa17.08■□□□□ 0.32
PCDHA2-202ENST00000520672 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.32
PCDHA2-202ENST00000520672 SLC4A10Q6U841 1118 aa17.07■□□□□ 0.32
PCDHA2-202ENST00000520672 CERS3Q8IU89 383 aa17.07■□□□□ 0.32
PCDHA2-202ENST00000520672 JARID2Q92833 1246 aaPredicted RBP17.07■□□□□ 0.32
PCDHA2-202ENST00000520672 APBB1O00213 710 aa17.07■□□□□ 0.32
PCDHA2-202ENST00000520672 DNAJC5Q9H3Z4 198 aa17.07■□□□□ 0.32
PCDHA2-202ENST00000520672 C22orf23Q9BZE7 217 aa17.06■□□□□ 0.32
PCDHA2-202ENST00000520672 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
PCDHA2-202ENST00000520672 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
PCDHA2-202ENST00000520672 CHL1O00533 1208 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms