RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
NR1I3-229ENST00000511748 KIF3BO15066 747 aa10.75□□□□□ -0.69
NR1I3-229ENST00000511748 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
NR1I3-229ENST00000511748 GOPCQ9HD26 462 aa10.75□□□□□ -0.69
NR1I3-229ENST00000511748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
NR1I3-229ENST00000511748 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
NR1I3-229ENST00000511748 ZC3H13Q5T200 1668 aaKnown RBP10.74□□□□□ -0.69
NR1I3-229ENST00000511748 FAM160A2Q8N612 972 aaPredicted RBP10.74□□□□□ -0.69
NR1I3-229ENST00000511748 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
NR1I3-229ENST00000511748 HRCP23327 699 aa10.73□□□□□ -0.69
NR1I3-229ENST00000511748 TUSC1Q2TAM9 212 aa10.73□□□□□ -0.69
NR1I3-229ENST00000511748 PLA2G2EQ9NZK7 142 aa10.73□□□□□ -0.69
NR1I3-229ENST00000511748 LILRB3O75022 631 aa10.72□□□□□ -0.69
NR1I3-229ENST00000511748 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
NR1I3-229ENST00000511748 RTL5Q5HYW3 569 aaPredicted RBP10.72□□□□□ -0.69
NR1I3-229ENST00000511748 SPSB2Q99619 263 aa10.72□□□□□ -0.69
NR1I3-229ENST00000511748 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
NR1I3-229ENST00000511748 C6orf229H3BNL8 230 aa10.71□□□□□ -0.69
NR1I3-229ENST00000511748 ADH1BP00325 375 aa10.71□□□□□ -0.69
NR1I3-229ENST00000511748 TSPY4P0CV99 314 aa10.71□□□□□ -0.69
NR1I3-229ENST00000511748 TSPY10P0CW01 314 aa10.71□□□□□ -0.69
NR1I3-229ENST00000511748 PRDM9Q9NQV7 894 aa10.71□□□□□ -0.69
NR1I3-229ENST00000511748 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
NR1I3-229ENST00000511748 ARHGEF5Q12774 1597 aa10.7□□□□□ -0.7
NR1I3-229ENST00000511748 TMEM132AQ24JP5 1023 aa10.7□□□□□ -0.7
NR1I3-229ENST00000511748 Q3C1V9 767 aa10.7□□□□□ -0.7
NR1I3-229ENST00000511748 EIF2AK4Q9P2K8 1649 aaKnown RBP10.69□□□□□ -0.7
NR1I3-229ENST00000511748 ZNF644Q9H582 1327 aaPredicted RBP10.69□□□□□ -0.7
NR1I3-229ENST00000511748 MTMR2Q13614 643 aa10.69□□□□□ -0.7
NR1I3-229ENST00000511748 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
NR1I3-229ENST00000511748 PCMTD1Q96MG8 357 aaPredicted RBP10.69□□□□□ -0.7
NR1I3-229ENST00000511748 USB1Q9BQ65 265 aaKnown RBP10.69□□□□□ -0.7
NR1I3-229ENST00000511748 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
NR1I3-229ENST00000511748 SCAF11Q99590 1463 aaKnown RBP10.68□□□□□ -0.7
NR1I3-229ENST00000511748 CFAP99D6REC4 459 aa10.68□□□□□ -0.7
NR1I3-229ENST00000511748 PRPF38BQ5VTL8 546 aaKnown RBP10.68□□□□□ -0.7
NR1I3-229ENST00000511748 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
NR1I3-229ENST00000511748 FAM135BQ49AJ0 1406 aa10.67□□□□□ -0.7
NR1I3-229ENST00000511748 S1PR4O95977 384 aa10.67□□□□□ -0.7
NR1I3-229ENST00000511748 RETREG3Q86VR2 466 aa10.67□□□□□ -0.7
NR1I3-229ENST00000511748 ABCC3O15438 1527 aa10.67□□□□□ -0.7
NR1I3-229ENST00000511748 ERVK-7P63135 1459 aa10.67□□□□□ -0.7
NR1I3-229ENST00000511748 MAST1Q9Y2H9 1570 aa10.66□□□□□ -0.7
NR1I3-229ENST00000511748 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
NR1I3-229ENST00000511748 PRR7Q8TB68 274 aa10.66□□□□□ -0.7
NR1I3-229ENST00000511748 EID1Q9Y6B2 187 aa10.66□□□□□ -0.7
NR1I3-229ENST00000511748 SLIT1O75093 1534 aa10.66□□□□□ -0.7
NR1I3-229ENST00000511748 PPEF1O14829 653 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-229ENST00000511748 MSS51Q4VC12 460 aa10.65□□□□□ -0.7
NR1I3-229ENST00000511748 NCOA2Q15596 1464 aa10.65□□□□□ -0.7
NR1I3-229ENST00000511748 LRRC9Q6ZRR7 1453 aa10.65□□□□□ -0.7
NR1I3-229ENST00000511748 ARHGAP23Q9P227 1491 aa10.65□□□□□ -0.7
NR1I3-229ENST00000511748 ARHGAP31Q2M1Z3 1444 aa10.65□□□□□ -0.7
NR1I3-229ENST00000511748 STRCP1A6NGW2 1772 aa10.65□□□□□ -0.71
NR1I3-229ENST00000511748 UBR1Q8IWV7 1749 aa10.64□□□□□ -0.71
NR1I3-229ENST00000511748 NUTM2BA6NNL0 878 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-229ENST00000511748 NUTM2EB1AL46 878 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-229ENST00000511748 NUTM2DQ5VT03 806 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-229ENST00000511748 PPP1R18Q6NYC8 613 aa10.64□□□□□ -0.71
NR1I3-229ENST00000511748 NUTM2AQ8IVF1 878 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-229ENST00000511748 SLC6A16Q9GZN6 736 aa10.64□□□□□ -0.71
NR1I3-229ENST00000511748 KDM5AP29375 1690 aaKnown RBP10.63□□□□□ -0.71
NR1I3-229ENST00000511748 SPDYE5A6NIY4 337 aa10.62□□□□□ -0.71
NR1I3-229ENST00000511748 TXNDC2Q86VQ3 553 aa10.62□□□□□ -0.71
NR1I3-229ENST00000511748 RNF223E7ERA6 249 aa10.61□□□□□ -0.71
NR1I3-229ENST00000511748 DXOO77932 396 aaKnown RBP10.61□□□□□ -0.71
NR1I3-229ENST00000511748 RFC5P40937 340 aa10.61□□□□□ -0.71
NR1I3-229ENST00000511748 MMP16P51512 607 aa10.61□□□□□ -0.71
NR1I3-229ENST00000511748 RGS17Q9UGC6 210 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-229ENST00000511748 DUOX2Q9NRD8 1548 aa10.61□□□□□ -0.71
NR1I3-229ENST00000511748 A0A0G2JS52 829 aa10.6□□□□□ -0.71
NR1I3-229ENST00000511748 PER1O15534 1290 aaPredicted RBP10.6□□□□□ -0.71
NR1I3-229ENST00000511748 JUNDP17535 347 aa10.6□□□□□ -0.71
NR1I3-229ENST00000511748 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.6□□□□□ -0.71
NR1I3-229ENST00000511748 NKTRP30414 1462 aaKnown RBP10.6□□□□□ -0.71
NR1I3-229ENST00000511748 PRDM15P57071 1507 aaPredicted RBP10.59□□□□□ -0.71
NR1I3-229ENST00000511748 PLA2G2CQ5R387 149 aa10.59□□□□□ -0.71
NR1I3-229ENST00000511748 TMEM2Q9UHN6 1383 aa10.59□□□□□ -0.71
NR1I3-229ENST00000511748 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
NR1I3-229ENST00000511748 ERBINQ96RT1 1412 aa10.58□□□□□ -0.72
NR1I3-229ENST00000511748 MROH1Q8NDA8 1641 aa10.58□□□□□ -0.72
NR1I3-229ENST00000511748 KCNA6P17658 529 aa10.58□□□□□ -0.72
NR1I3-229ENST00000511748 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
NR1I3-229ENST00000511748 XIRP1Q702N8 1843 aaKnown RBP10.58□□□□□ -0.72
NR1I3-229ENST00000511748 TMEM94Q12767 1356 aa10.57□□□□□ -0.72
NR1I3-229ENST00000511748 KANK1Q14678 1352 aa10.57□□□□□ -0.72
NR1I3-229ENST00000511748 LTKP29376 864 aa10.57□□□□□ -0.72
NR1I3-229ENST00000511748 TSC1Q92574 1164 aa10.57□□□□□ -0.72
NR1I3-229ENST00000511748 EMID1Q96A84 441 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-229ENST00000511748 CEP152O94986 1710 aa10.56□□□□□ -0.72
NR1I3-229ENST00000511748 MSH6P52701 1360 aa10.56□□□□□ -0.72
NR1I3-229ENST00000511748 JCADQ9P266 1359 aa10.56□□□□□ -0.72
NR1I3-229ENST00000511748 DESI1Q6ICB0 168 aa10.56□□□□□ -0.72
NR1I3-229ENST00000511748 EFCAB6Q5THR3 1501 aa10.56□□□□□ -0.72
NR1I3-229ENST00000511748 ROBO1Q9Y6N7 1651 aa10.56□□□□□ -0.72
NR1I3-229ENST00000511748 MAP3K1Q13233 1512 aa10.55□□□□□ -0.72
NR1I3-229ENST00000511748 AP1G2O75843 785 aa10.55□□□□□ -0.72
NR1I3-229ENST00000511748 LYPD8Q6UX82 237 aa10.55□□□□□ -0.72
NR1I3-229ENST00000511748 FCF1Q9Y324 198 aaKnown RBP10.55□□□□□ -0.72
NR1I3-229ENST00000511748 NCOA3Q9Y6Q9 1424 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms