RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 LRP2BPQ9P2M1 347 aa10.77□□□□□ -0.68
NEK1-207ENST00000511633 PEG3Q9GZU2 1588 aa10.77□□□□□ -0.68
NEK1-207ENST00000511633 F6X3S4 739 aa10.77□□□□□ -0.68
NEK1-207ENST00000511633 ANKRD1Q15327 319 aa10.77□□□□□ -0.68
NEK1-207ENST00000511633 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.69
NEK1-207ENST00000511633 METTL24Q5JXM2 366 aa10.77□□□□□ -0.69
NEK1-207ENST00000511633 KRT28Q7Z3Y7 464 aa10.77□□□□□ -0.69
NEK1-207ENST00000511633 JAKMIP1Q96N16 626 aaKnown RBP10.77□□□□□ -0.69
NEK1-207ENST00000511633 BACH2Q9BYV9 841 aa10.77□□□□□ -0.69
NEK1-207ENST00000511633 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
NEK1-207ENST00000511633 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.69
NEK1-207ENST00000511633 RARSP54136 660 aaKnown RBP10.77□□□□□ -0.69
NEK1-207ENST00000511633 TRIM22Q8IYM9 498 aa10.77□□□□□ -0.69
NEK1-207ENST00000511633 GPATCH8Q9UKJ3 1502 aaKnown RBP10.76□□□□□ -0.69
NEK1-207ENST00000511633 K7ELQ4 463 aaPredicted RBP10.76□□□□□ -0.69
NEK1-207ENST00000511633 C20orf194Q5TEA3 1177 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 PDRG1Q9NUG6 133 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 BLOC1S2Q6QNY1 142 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 ZSCAN29Q8IWY8 852 aaPredicted RBP10.76□□□□□ -0.69
NEK1-207ENST00000511633 LARP1Q6PKG0 1096 aaKnown RBP10.76□□□□□ -0.69
NEK1-207ENST00000511633 CCAR1Q8IX12 1150 aaKnown RBP10.76□□□□□ -0.69
NEK1-207ENST00000511633 RPRD2Q5VT52 1461 aaKnown RBP10.76□□□□□ -0.69
NEK1-207ENST00000511633 RAPGEF6Q8TEU7 1601 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 KDM5BQ9UGL1 1544 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 TXLNAP40222 546 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 ABCF2Q9UG63 623 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
NEK1-207ENST00000511633 ZPR1O75312 459 aa10.75□□□□□ -0.69
NEK1-207ENST00000511633 SMC2O95347 1197 aa10.75□□□□□ -0.69
NEK1-207ENST00000511633 MBD3O95983 291 aa10.75□□□□□ -0.69
NEK1-207ENST00000511633 CT47A1Q5JQC4 288 aaPredicted RBP10.75□□□□□ -0.69
NEK1-207ENST00000511633 PPP6R1Q9UPN7 881 aa10.75□□□□□ -0.69
NEK1-207ENST00000511633 KRT18P05783 430 aaKnown RBP10.75□□□□□ -0.69
NEK1-207ENST00000511633 TRIM5Q9C035 493 aa10.75□□□□□ -0.69
NEK1-207ENST00000511633 R3HCC1Q9Y3T6 440 aaKnown RBP10.75□□□□□ -0.69
NEK1-207ENST00000511633 ACEP12821 1306 aa10.75□□□□□ -0.69
NEK1-207ENST00000511633 OFD1O75665 1012 aa10.75□□□□□ -0.69
NEK1-207ENST00000511633 ALDH1L2Q3SY69 923 aa10.75□□□□□ -0.69
NEK1-207ENST00000511633 ABCC11Q96J66 1382 aa10.75□□□□□ -0.69
NEK1-207ENST00000511633 LETM1O95202 739 aaPredicted RBP10.74□□□□□ -0.69
NEK1-207ENST00000511633 FBLN1P23142 703 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 LARP1BQ659C4 914 aaKnown RBP10.74□□□□□ -0.69
NEK1-207ENST00000511633 TSPY26PQ9H489 355 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 ZNF652Q9Y2D9 606 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 MX1P20591 662 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 TMEM132AQ24JP5 1023 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 AEBP1Q8IUX7 1158 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 UBAC1Q9BSL1 405 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 TNRQ92752 1358 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 NKTRP30414 1462 aaKnown RBP10.74□□□□□ -0.69
NEK1-207ENST00000511633 PIBF1Q8WXW3 757 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 AIDAQ96BJ3 306 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 KIF1BPQ96EK5 621 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 CTNNA3Q9UI47 895 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 ME1P48163 572 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 BRPF1P55201 1214 aaPredicted RBP10.74□□□□□ -0.69
NEK1-207ENST00000511633 TTLL5Q6EMB2 1281 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 MRE11P49959 708 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 NGLY1Q96IV0 654 aa10.74□□□□□ -0.69
NEK1-207ENST00000511633 ASXL2Q76L83 1435 aa10.73□□□□□ -0.69
NEK1-207ENST00000511633 GPS2Q13227 327 aa10.73□□□□□ -0.69
NEK1-207ENST00000511633 FAM83GA6ND36 823 aa10.73□□□□□ -0.69
NEK1-207ENST00000511633 BOLA2Q9H3K6 86 aa10.73□□□□□ -0.69
NEK1-207ENST00000511633 CHRNA2Q15822 529 aa10.73□□□□□ -0.69
NEK1-207ENST00000511633 SOGA3Q5TF21 947 aa10.73□□□□□ -0.69
NEK1-207ENST00000511633 SKAP1Q86WV1 359 aa10.73□□□□□ -0.69
NEK1-207ENST00000511633 ATP10BO94823 1461 aa10.73□□□□□ -0.69
NEK1-207ENST00000511633 WDR33Q9C0J8 1336 aaKnown RBP10.73□□□□□ -0.69
NEK1-207ENST00000511633 CASTP20810 708 aaKnown RBP10.73□□□□□ -0.69
NEK1-207ENST00000511633 DNAAF4Q8WXU2 420 aa10.73□□□□□ -0.69
NEK1-207ENST00000511633 LRRFIP2Q9Y608 721 aaKnown RBP10.73□□□□□ -0.69
NEK1-207ENST00000511633 TNNT3P45378 269 aaPredicted RBP10.72□□□□□ -0.69
NEK1-207ENST00000511633 JMYQ8N9B5 988 aa10.72□□□□□ -0.69
NEK1-207ENST00000511633 CCDC39Q9UFE4 941 aa10.72□□□□□ -0.69
NEK1-207ENST00000511633 TRMT112Q9UI30 125 aaKnown RBP10.72□□□□□ -0.69
NEK1-207ENST00000511633 LRPPRCP42704 1394 aaKnown RBP10.72□□□□□ -0.69
NEK1-207ENST00000511633 RAB11FIP3O75154 756 aa10.72□□□□□ -0.69
NEK1-207ENST00000511633 HSP90AA2PQ14568 343 aaPredicted RBP10.72□□□□□ -0.69
NEK1-207ENST00000511633 AKAP2Q9Y2D5 859 aa10.72□□□□□ -0.69
NEK1-207ENST00000511633 EXOC5O00471 708 aa10.72□□□□□ -0.69
NEK1-207ENST00000511633 ZBTB3Q9H5J0 574 aa10.72□□□□□ -0.69
NEK1-207ENST00000511633 MAGEC2Q9UBF1 373 aaPredicted RBP10.72□□□□□ -0.69
NEK1-207ENST00000511633 TTC21BQ7Z4L5 1316 aa10.72□□□□□ -0.69
NEK1-207ENST00000511633 IMMTQ16891 758 aaKnown RBP10.71□□□□□ -0.69
NEK1-207ENST00000511633 ODF2Q5BJF6 829 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 MNS1Q8NEH6 495 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 RSPH6AQ9H0K4 717 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 CCDC8Q9H0W5 538 aaPredicted RBP10.71□□□□□ -0.69
NEK1-207ENST00000511633 PLCH2O75038 1416 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 GPTP24298 496 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 ZFYVE27Q5T4F4 411 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 FAM43AQ8N2R8 423 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 ANKRD24Q8TF21 1146 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 ZHX3Q9H4I2 956 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 ANKIB1Q9P2G1 1089 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 SYCP2Q9BX26 1530 aa10.71□□□□□ -0.69
NEK1-207ENST00000511633 IFIT5Q13325 482 aaKnown RBP10.71□□□□□ -0.69
NEK1-207ENST00000511633 DBF4Q9UBU7 674 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms