RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
NR1I3-224ENST00000507215 KIF3BO15066 747 aa10.75□□□□□ -0.69
NR1I3-224ENST00000507215 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
NR1I3-224ENST00000507215 GOPCQ9HD26 462 aa10.75□□□□□ -0.69
NR1I3-224ENST00000507215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
NR1I3-224ENST00000507215 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
NR1I3-224ENST00000507215 ZC3H13Q5T200 1668 aaKnown RBP10.74□□□□□ -0.69
NR1I3-224ENST00000507215 FAM160A2Q8N612 972 aaPredicted RBP10.74□□□□□ -0.69
NR1I3-224ENST00000507215 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
NR1I3-224ENST00000507215 HRCP23327 699 aa10.73□□□□□ -0.69
NR1I3-224ENST00000507215 TUSC1Q2TAM9 212 aa10.73□□□□□ -0.69
NR1I3-224ENST00000507215 PLA2G2EQ9NZK7 142 aa10.73□□□□□ -0.69
NR1I3-224ENST00000507215 LILRB3O75022 631 aa10.72□□□□□ -0.69
NR1I3-224ENST00000507215 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
NR1I3-224ENST00000507215 RTL5Q5HYW3 569 aaPredicted RBP10.72□□□□□ -0.69
NR1I3-224ENST00000507215 SPSB2Q99619 263 aa10.72□□□□□ -0.69
NR1I3-224ENST00000507215 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
NR1I3-224ENST00000507215 C6orf229H3BNL8 230 aa10.71□□□□□ -0.69
NR1I3-224ENST00000507215 ADH1BP00325 375 aa10.71□□□□□ -0.69
NR1I3-224ENST00000507215 TSPY4P0CV99 314 aa10.71□□□□□ -0.69
NR1I3-224ENST00000507215 TSPY10P0CW01 314 aa10.71□□□□□ -0.69
NR1I3-224ENST00000507215 PRDM9Q9NQV7 894 aa10.71□□□□□ -0.69
NR1I3-224ENST00000507215 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
NR1I3-224ENST00000507215 ARHGEF5Q12774 1597 aa10.7□□□□□ -0.7
NR1I3-224ENST00000507215 TMEM132AQ24JP5 1023 aa10.7□□□□□ -0.7
NR1I3-224ENST00000507215 Q3C1V9 767 aa10.7□□□□□ -0.7
NR1I3-224ENST00000507215 EIF2AK4Q9P2K8 1649 aaKnown RBP10.69□□□□□ -0.7
NR1I3-224ENST00000507215 ZNF644Q9H582 1327 aaPredicted RBP10.69□□□□□ -0.7
NR1I3-224ENST00000507215 MTMR2Q13614 643 aa10.69□□□□□ -0.7
NR1I3-224ENST00000507215 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
NR1I3-224ENST00000507215 PCMTD1Q96MG8 357 aaPredicted RBP10.69□□□□□ -0.7
NR1I3-224ENST00000507215 USB1Q9BQ65 265 aaKnown RBP10.69□□□□□ -0.7
NR1I3-224ENST00000507215 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
NR1I3-224ENST00000507215 SCAF11Q99590 1463 aaKnown RBP10.68□□□□□ -0.7
NR1I3-224ENST00000507215 CFAP99D6REC4 459 aa10.68□□□□□ -0.7
NR1I3-224ENST00000507215 PRPF38BQ5VTL8 546 aaKnown RBP10.68□□□□□ -0.7
NR1I3-224ENST00000507215 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
NR1I3-224ENST00000507215 FAM135BQ49AJ0 1406 aa10.67□□□□□ -0.7
NR1I3-224ENST00000507215 S1PR4O95977 384 aa10.67□□□□□ -0.7
NR1I3-224ENST00000507215 RETREG3Q86VR2 466 aa10.67□□□□□ -0.7
NR1I3-224ENST00000507215 ABCC3O15438 1527 aa10.67□□□□□ -0.7
NR1I3-224ENST00000507215 ERVK-7P63135 1459 aa10.67□□□□□ -0.7
NR1I3-224ENST00000507215 MAST1Q9Y2H9 1570 aa10.66□□□□□ -0.7
NR1I3-224ENST00000507215 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
NR1I3-224ENST00000507215 PRR7Q8TB68 274 aa10.66□□□□□ -0.7
NR1I3-224ENST00000507215 EID1Q9Y6B2 187 aa10.66□□□□□ -0.7
NR1I3-224ENST00000507215 SLIT1O75093 1534 aa10.66□□□□□ -0.7
NR1I3-224ENST00000507215 PPEF1O14829 653 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-224ENST00000507215 MSS51Q4VC12 460 aa10.65□□□□□ -0.7
NR1I3-224ENST00000507215 NCOA2Q15596 1464 aa10.65□□□□□ -0.7
NR1I3-224ENST00000507215 LRRC9Q6ZRR7 1453 aa10.65□□□□□ -0.7
NR1I3-224ENST00000507215 ARHGAP23Q9P227 1491 aa10.65□□□□□ -0.7
NR1I3-224ENST00000507215 ARHGAP31Q2M1Z3 1444 aa10.65□□□□□ -0.7
NR1I3-224ENST00000507215 STRCP1A6NGW2 1772 aa10.65□□□□□ -0.71
NR1I3-224ENST00000507215 UBR1Q8IWV7 1749 aa10.64□□□□□ -0.71
NR1I3-224ENST00000507215 NUTM2BA6NNL0 878 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-224ENST00000507215 NUTM2EB1AL46 878 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-224ENST00000507215 NUTM2DQ5VT03 806 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-224ENST00000507215 PPP1R18Q6NYC8 613 aa10.64□□□□□ -0.71
NR1I3-224ENST00000507215 NUTM2AQ8IVF1 878 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-224ENST00000507215 SLC6A16Q9GZN6 736 aa10.64□□□□□ -0.71
NR1I3-224ENST00000507215 KDM5AP29375 1690 aaKnown RBP10.63□□□□□ -0.71
NR1I3-224ENST00000507215 SPDYE5A6NIY4 337 aa10.62□□□□□ -0.71
NR1I3-224ENST00000507215 TXNDC2Q86VQ3 553 aa10.62□□□□□ -0.71
NR1I3-224ENST00000507215 RNF223E7ERA6 249 aa10.61□□□□□ -0.71
NR1I3-224ENST00000507215 DXOO77932 396 aaKnown RBP10.61□□□□□ -0.71
NR1I3-224ENST00000507215 RFC5P40937 340 aa10.61□□□□□ -0.71
NR1I3-224ENST00000507215 MMP16P51512 607 aa10.61□□□□□ -0.71
NR1I3-224ENST00000507215 RGS17Q9UGC6 210 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-224ENST00000507215 DUOX2Q9NRD8 1548 aa10.61□□□□□ -0.71
NR1I3-224ENST00000507215 A0A0G2JS52 829 aa10.6□□□□□ -0.71
NR1I3-224ENST00000507215 PER1O15534 1290 aaPredicted RBP10.6□□□□□ -0.71
NR1I3-224ENST00000507215 JUNDP17535 347 aa10.6□□□□□ -0.71
NR1I3-224ENST00000507215 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.6□□□□□ -0.71
NR1I3-224ENST00000507215 NKTRP30414 1462 aaKnown RBP10.6□□□□□ -0.71
NR1I3-224ENST00000507215 PRDM15P57071 1507 aaPredicted RBP10.59□□□□□ -0.71
NR1I3-224ENST00000507215 PLA2G2CQ5R387 149 aa10.59□□□□□ -0.71
NR1I3-224ENST00000507215 TMEM2Q9UHN6 1383 aa10.59□□□□□ -0.71
NR1I3-224ENST00000507215 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
NR1I3-224ENST00000507215 ERBINQ96RT1 1412 aa10.58□□□□□ -0.72
NR1I3-224ENST00000507215 MROH1Q8NDA8 1641 aa10.58□□□□□ -0.72
NR1I3-224ENST00000507215 KCNA6P17658 529 aa10.58□□□□□ -0.72
NR1I3-224ENST00000507215 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
NR1I3-224ENST00000507215 XIRP1Q702N8 1843 aaKnown RBP10.58□□□□□ -0.72
NR1I3-224ENST00000507215 TMEM94Q12767 1356 aa10.57□□□□□ -0.72
NR1I3-224ENST00000507215 KANK1Q14678 1352 aa10.57□□□□□ -0.72
NR1I3-224ENST00000507215 LTKP29376 864 aa10.57□□□□□ -0.72
NR1I3-224ENST00000507215 TSC1Q92574 1164 aa10.57□□□□□ -0.72
NR1I3-224ENST00000507215 EMID1Q96A84 441 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-224ENST00000507215 CEP152O94986 1710 aa10.56□□□□□ -0.72
NR1I3-224ENST00000507215 MSH6P52701 1360 aa10.56□□□□□ -0.72
NR1I3-224ENST00000507215 JCADQ9P266 1359 aa10.56□□□□□ -0.72
NR1I3-224ENST00000507215 DESI1Q6ICB0 168 aa10.56□□□□□ -0.72
NR1I3-224ENST00000507215 EFCAB6Q5THR3 1501 aa10.56□□□□□ -0.72
NR1I3-224ENST00000507215 ROBO1Q9Y6N7 1651 aa10.56□□□□□ -0.72
NR1I3-224ENST00000507215 MAP3K1Q13233 1512 aa10.55□□□□□ -0.72
NR1I3-224ENST00000507215 AP1G2O75843 785 aa10.55□□□□□ -0.72
NR1I3-224ENST00000507215 LYPD8Q6UX82 237 aa10.55□□□□□ -0.72
NR1I3-224ENST00000507215 FCF1Q9Y324 198 aaKnown RBP10.55□□□□□ -0.72
NR1I3-224ENST00000507215 NCOA3Q9Y6Q9 1424 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms