RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
NXF3-207ENST00000497850 TOPAZ1Q8N9V7 1692 aa16.11■□□□□ 0.17
NXF3-207ENST00000497850 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
NXF3-207ENST00000497850 AMOTL2Q9Y2J4 779 aa16.11■□□□□ 0.17
NXF3-207ENST00000497850 USP6P35125 1406 aa16.11■□□□□ 0.17
NXF3-207ENST00000497850 RGPD8O14715 1765 aaPredicted RBP16.11■□□□□ 0.17
NXF3-207ENST00000497850 FOXO3O43524 673 aa16.11■□□□□ 0.17
NXF3-207ENST00000497850 OVOS2A0A0J9YW53 1432 aa16.11■□□□□ 0.17
NXF3-207ENST00000497850 OVOS2Q6IE36 1432 aa16.11■□□□□ 0.17
NXF3-207ENST00000497850 PLEKHG1Q9ULL1 1385 aa16.1■□□□□ 0.17
NXF3-207ENST00000497850 PIK3R4Q99570 1358 aa16.1■□□□□ 0.17
NXF3-207ENST00000497850 NUTM2GQ5VZR2 741 aa16.09■□□□□ 0.17
NXF3-207ENST00000497850 CHMP5Q9NZZ3 219 aa16.09■□□□□ 0.17
NXF3-207ENST00000497850 PLEKHG3A1L390 1219 aa16.08■□□□□ 0.17
NXF3-207ENST00000497850 KIAA1211Q6ZU35 1233 aa16.08■□□□□ 0.17
NXF3-207ENST00000497850 EID1Q9Y6B2 187 aa16.08■□□□□ 0.17
NXF3-207ENST00000497850 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
NXF3-207ENST00000497850 MAP3K19Q56UN5 1328 aa16.08■□□□□ 0.16
NXF3-207ENST00000497850 NGDNQ8NEJ9 315 aaKnown RBP16.07■□□□□ 0.16
NXF3-207ENST00000497850 TRIM44Q96DX7 344 aaPredicted RBP16.07■□□□□ 0.16
NXF3-207ENST00000497850 GCC1Q96CN9 775 aa16.07■□□□□ 0.16
NXF3-207ENST00000497850 RBM10P98175 930 aaKnown RBP16.06■□□□□ 0.16
NXF3-207ENST00000497850 DDX11L8A8MPP1 907 aa16.06■□□□□ 0.16
NXF3-207ENST00000497850 APBB1O00213 710 aa16.06■□□□□ 0.16
NXF3-207ENST00000497850 NALCNQ8IZF0 1738 aa16.06■□□□□ 0.16
NXF3-207ENST00000497850 CHL1O00533 1208 aa16.05■□□□□ 0.16
NXF3-207ENST00000497850 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
NXF3-207ENST00000497850 CHMP4BQ9H444 224 aaKnown RBP16.05■□□□□ 0.16
NXF3-207ENST00000497850 BMP2KLQ5H9B9 411 aa16.04■□□□□ 0.16
NXF3-207ENST00000497850 GAS2L3Q86XJ1 694 aa16.04■□□□□ 0.16
NXF3-207ENST00000497850 C16orf71Q8IYS4 520 aaPredicted RBP16.04■□□□□ 0.16
NXF3-207ENST00000497850 RGPD1P0DJD0 1748 aa16.04■□□□□ 0.16
NXF3-207ENST00000497850 FMN2Q9NZ56 1722 aa16.04■□□□□ 0.16
NXF3-207ENST00000497850 AMPHP49418 695 aa16.03■□□□□ 0.16
NXF3-207ENST00000497850 HSCBQ8IWL3 235 aa16.03■□□□□ 0.16
NXF3-207ENST00000497850 MSH6P52701 1360 aa16.03■□□□□ 0.16
NXF3-207ENST00000497850 USP31Q70CQ4 1352 aa16.03■□□□□ 0.16
NXF3-207ENST00000497850 RGS12O14924 1447 aa16.03■□□□□ 0.16
NXF3-207ENST00000497850 TBC1D9Q6ZT07 1266 aa16.02■□□□□ 0.16
NXF3-207ENST00000497850 NCOA3Q9Y6Q9 1424 aa16.02■□□□□ 0.16
NXF3-207ENST00000497850 SLC4A2P04920 1241 aa16.02■□□□□ 0.15
NXF3-207ENST00000497850 SSH2Q76I76 1423 aa16.02■□□□□ 0.15
NXF3-207ENST00000497850 DIP2AQ14689 1571 aa16.02■□□□□ 0.15
NXF3-207ENST00000497850 OFD1O75665 1012 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 G2E3Q7L622 706 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 OTUD7AQ8TE49 926 aaPredicted RBP16.01■□□□□ 0.15
NXF3-207ENST00000497850 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
NXF3-207ENST00000497850 EYA1Q99502 592 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 MEIS3Q99687 375 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 F6X3S4 739 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 SMARCA5O60264 1052 aaPredicted RBP16.01■□□□□ 0.15
NXF3-207ENST00000497850 NLRP6P59044 892 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 CRB1P82279 1406 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 NECTIN2Q92692 538 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 RBM33Q96EV2 1170 aaKnown RBP16.01■□□□□ 0.15
NXF3-207ENST00000497850 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 TSPYL4Q9UJ04 414 aa16.01■□□□□ 0.15
NXF3-207ENST00000497850 CEP170BQ9Y4F5 1589 aaPredicted RBP16.01■□□□□ 0.15
NXF3-207ENST00000497850 GSPT1P15170 499 aaKnown RBP16■□□□□ 0.15
NXF3-207ENST00000497850 INTS3Q68E01 1043 aaKnown RBP16■□□□□ 0.15
NXF3-207ENST00000497850 SLC4A10Q6U841 1118 aa16■□□□□ 0.15
NXF3-207ENST00000497850 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
NXF3-207ENST00000497850 RBM25P49756 843 aaKnown RBP15.99■□□□□ 0.15
NXF3-207ENST00000497850 TERF1P54274 439 aa15.99■□□□□ 0.15
NXF3-207ENST00000497850 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
NXF3-207ENST00000497850 DDIT3P35638 169 aa15.99■□□□□ 0.15
NXF3-207ENST00000497850 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
NXF3-207ENST00000497850 PLEKHM2Q8IWE5 1019 aa15.99■□□□□ 0.15
NXF3-207ENST00000497850 PIK3C2AO00443 1686 aa15.99■□□□□ 0.15
NXF3-207ENST00000497850 FLT4P35916 1363 aa15.99■□□□□ 0.15
NXF3-207ENST00000497850 A0A0U1RQG5 324 aaPredicted RBP15.98■□□□□ 0.15
NXF3-207ENST00000497850 CD2BP2O95400 341 aaKnown RBP15.98■□□□□ 0.15
NXF3-207ENST00000497850 KCNA6P17658 529 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 TBX22Q9Y458 520 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 FER1L4A9Z1Z3 1794 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 SBNO1A3KN83 1393 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 ARHGEF10O15013 1369 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 CEP85Q6P2H3 762 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 ZSCAN30Q86W11 494 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 PPP1R9BQ96SB3 815 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 KIF2CQ99661 725 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 DCTPP1Q9H773 170 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 ATP10DQ9P241 1426 aa15.98■□□□□ 0.15
NXF3-207ENST00000497850 CCDC173Q0VFZ6 552 aa15.97■□□□□ 0.15
NXF3-207ENST00000497850 MAP7D2Q96T17 732 aa15.97■□□□□ 0.15
NXF3-207ENST00000497850 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.97■□□□□ 0.15
NXF3-207ENST00000497850 ANKRD44Q8N8A2 993 aa15.97■□□□□ 0.15
NXF3-207ENST00000497850 KIAA0232Q92628 1395 aa15.96■□□□□ 0.15
NXF3-207ENST00000497850 SLIT1O75093 1534 aa15.96■□□□□ 0.15
NXF3-207ENST00000497850 USHBP1Q8N6Y0 703 aa15.96■□□□□ 0.15
NXF3-207ENST00000497850 RTL1A6NKG5 1358 aa15.96■□□□□ 0.15
NXF3-207ENST00000497850 ARHGAP23Q9P227 1491 aa15.96■□□□□ 0.15
NXF3-207ENST00000497850 HSP90AB1P08238 724 aaKnown RBP15.96■□□□□ 0.14
NXF3-207ENST00000497850 THEMISQ8N1K5 641 aaPredicted RBP15.96■□□□□ 0.14
NXF3-207ENST00000497850 SETD1BQ9UPS6 1966 aaKnown RBP15.96■□□□□ 0.14
NXF3-207ENST00000497850 CDC45O75419 566 aa15.94■□□□□ 0.14
NXF3-207ENST00000497850 KIF24Q5T7B8 1368 aa15.94■□□□□ 0.14
NXF3-207ENST00000497850 PTPRCP08575 1304 aa15.94■□□□□ 0.14
NXF3-207ENST00000497850 IGSF1Q8N6C5 1336 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms