RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 MRE11P49959 708 aa18.46■□□□□ 0.55
UBXN11-215ENST00000494942 OVOS2A0A0J9YW53 1432 aa18.45■□□□□ 0.54
UBXN11-215ENST00000494942 OVOS2Q6IE36 1432 aa18.45■□□□□ 0.54
UBXN11-215ENST00000494942 SKOR2Q2VWA4 1001 aaPredicted RBP18.45■□□□□ 0.54
UBXN11-215ENST00000494942 TMEM2Q9UHN6 1383 aa18.45■□□□□ 0.54
UBXN11-215ENST00000494942 GSPT1P15170 499 aaKnown RBP18.45■□□□□ 0.54
UBXN11-215ENST00000494942 TTC22Q5TAA0 569 aa18.45■□□□□ 0.54
UBXN11-215ENST00000494942 AEBP1Q8IUX7 1158 aa18.45■□□□□ 0.54
UBXN11-215ENST00000494942 RGS12O14924 1447 aa18.44■□□□□ 0.54
UBXN11-215ENST00000494942 PLEKHG3A1L390 1219 aa18.44■□□□□ 0.54
UBXN11-215ENST00000494942 TOPAZ1Q8N9V7 1692 aa18.44■□□□□ 0.54
UBXN11-215ENST00000494942 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
UBXN11-215ENST00000494942 ROBO2Q9HCK4 1378 aa18.44■□□□□ 0.54
UBXN11-215ENST00000494942 NALCNQ8IZF0 1738 aa18.43■□□□□ 0.54
UBXN11-215ENST00000494942 ACEP12821 1306 aa18.43■□□□□ 0.54
UBXN11-215ENST00000494942 RGPD1P0DJD0 1748 aa18.42■□□□□ 0.54
UBXN11-215ENST00000494942 RABEP1Q15276 862 aa18.42■□□□□ 0.54
UBXN11-215ENST00000494942 UBR1Q8IWV7 1749 aa18.42■□□□□ 0.54
UBXN11-215ENST00000494942 USP31Q70CQ4 1352 aa18.42■□□□□ 0.54
UBXN11-215ENST00000494942 CD2BP2O95400 341 aaKnown RBP18.41■□□□□ 0.54
UBXN11-215ENST00000494942 CEP85Q6P2H3 762 aa18.41■□□□□ 0.54
UBXN11-215ENST00000494942 USP6P35125 1406 aa18.41■□□□□ 0.54
UBXN11-215ENST00000494942 ADAMTS13Q76LX8 1427 aa18.4■□□□□ 0.54
UBXN11-215ENST00000494942 CASC1Q6TDU7 716 aa18.4■□□□□ 0.54
UBXN11-215ENST00000494942 MCM10Q7L590 875 aa18.4■□□□□ 0.54
UBXN11-215ENST00000494942 RTL1A6NKG5 1358 aa18.4■□□□□ 0.54
UBXN11-215ENST00000494942 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.4■□□□□ 0.54
UBXN11-215ENST00000494942 CLEC17AQ6ZS10 378 aa18.39■□□□□ 0.53
UBXN11-215ENST00000494942 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
UBXN11-215ENST00000494942 ARHGEF10O15013 1369 aa18.39■□□□□ 0.53
UBXN11-215ENST00000494942 MSH6P52701 1360 aa18.39■□□□□ 0.53
UBXN11-215ENST00000494942 CRB1P82279 1406 aa18.39■□□□□ 0.53
UBXN11-215ENST00000494942 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.53
UBXN11-215ENST00000494942 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
UBXN11-215ENST00000494942 ARXQ96QS3 562 aa18.39■□□□□ 0.53
UBXN11-215ENST00000494942 GRPEL1Q9HAV7 217 aa18.39■□□□□ 0.53
UBXN11-215ENST00000494942 PEAK1Q9H792 1746 aa18.39■□□□□ 0.53
UBXN11-215ENST00000494942 HSP90AB2PQ58FF8 381 aa18.38■□□□□ 0.53
UBXN11-215ENST00000494942 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
UBXN11-215ENST00000494942 PLEKHG1Q9ULL1 1385 aa18.38■□□□□ 0.53
UBXN11-215ENST00000494942 GOLGA6L22H0YM25 854 aa18.38■□□□□ 0.53
UBXN11-215ENST00000494942 HMMRO75330 724 aa18.38■□□□□ 0.53
UBXN11-215ENST00000494942 USP26Q9BXU7 913 aa18.38■□□□□ 0.53
UBXN11-215ENST00000494942 GAS2L2Q8NHY3 880 aa18.37■□□□□ 0.53
UBXN11-215ENST00000494942 TTC21AQ8NDW8 1320 aa18.37■□□□□ 0.53
UBXN11-215ENST00000494942 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
UBXN11-215ENST00000494942 C16orf71Q8IYS4 520 aaPredicted RBP18.37■□□□□ 0.53
UBXN11-215ENST00000494942 PANK2Q9BZ23 570 aa18.37■□□□□ 0.53
UBXN11-215ENST00000494942 SSH2Q76I76 1423 aa18.36■□□□□ 0.53
UBXN11-215ENST00000494942 RRAGDQ9NQL2 400 aaPredicted RBP18.36■□□□□ 0.53
UBXN11-215ENST00000494942 RTF1Q92541 710 aaKnown RBP18.35■□□□□ 0.53
UBXN11-215ENST00000494942 MEIS3Q99687 375 aa18.35■□□□□ 0.53
UBXN11-215ENST00000494942 CCT4P50991 539 aaKnown RBP18.35■□□□□ 0.53
UBXN11-215ENST00000494942 FOXD4L1Q9NU39 408 aa18.35■□□□□ 0.53
UBXN11-215ENST00000494942 SDSP20132 328 aa18.34■□□□□ 0.53
UBXN11-215ENST00000494942 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.34■□□□□ 0.53
UBXN11-215ENST00000494942 FMN2Q9NZ56 1722 aa18.33■□□□□ 0.53
UBXN11-215ENST00000494942 REC8O95072 547 aa18.33■□□□□ 0.53
UBXN11-215ENST00000494942 NUCB2P80303 420 aa18.33■□□□□ 0.53
UBXN11-215ENST00000494942 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.52
UBXN11-215ENST00000494942 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
UBXN11-215ENST00000494942 SBNO1A3KN83 1393 aa18.33■□□□□ 0.52
UBXN11-215ENST00000494942 FLT4P35916 1363 aa18.33■□□□□ 0.52
UBXN11-215ENST00000494942 KDRP35968 1356 aa18.33■□□□□ 0.52
UBXN11-215ENST00000494942 SSFA2P28290 1259 aa18.32■□□□□ 0.52
UBXN11-215ENST00000494942 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
UBXN11-215ENST00000494942 OSBPL3Q9H4L5 887 aa18.32■□□□□ 0.52
UBXN11-215ENST00000494942 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
UBXN11-215ENST00000494942 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
UBXN11-215ENST00000494942 CWC22Q9HCG8 908 aaKnown RBP18.32■□□□□ 0.52
UBXN11-215ENST00000494942 ST18O60284 1047 aa18.31■□□□□ 0.52
UBXN11-215ENST00000494942 MTHFSDQ2M296 383 aaKnown RBP18.31■□□□□ 0.52
UBXN11-215ENST00000494942 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
UBXN11-215ENST00000494942 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
UBXN11-215ENST00000494942 NUTM2FA1L443 756 aa18.3■□□□□ 0.52
UBXN11-215ENST00000494942 BAG4O95429 457 aaKnown RBP18.3■□□□□ 0.52
UBXN11-215ENST00000494942 IBTKQ9P2D0 1353 aaPredicted RBP18.3■□□□□ 0.52
UBXN11-215ENST00000494942 LTKP29376 864 aa18.29■□□□□ 0.52
UBXN11-215ENST00000494942 ERC2O15083 957 aa18.29■□□□□ 0.52
UBXN11-215ENST00000494942 KLHL40Q2TBA0 621 aa18.29■□□□□ 0.52
UBXN11-215ENST00000494942 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
UBXN11-215ENST00000494942 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
UBXN11-215ENST00000494942 APBB1O00213 710 aa18.28■□□□□ 0.52
UBXN11-215ENST00000494942 CLCN1P35523 988 aa18.28■□□□□ 0.52
UBXN11-215ENST00000494942 HSPA2P54652 639 aa18.28■□□□□ 0.52
UBXN11-215ENST00000494942 MIS18AQ9NYP9 233 aa18.28■□□□□ 0.52
UBXN11-215ENST00000494942 GNAI2P04899 355 aa18.28■□□□□ 0.52
UBXN11-215ENST00000494942 SLC4A10Q6U841 1118 aa18.28■□□□□ 0.52
UBXN11-215ENST00000494942 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
UBXN11-215ENST00000494942 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
UBXN11-215ENST00000494942 SOX12O15370 315 aa18.27■□□□□ 0.52
UBXN11-215ENST00000494942 FOXO3O43524 673 aa18.27■□□□□ 0.52
UBXN11-215ENST00000494942 SOS1Q07889 1333 aaPredicted RBP18.27■□□□□ 0.52
UBXN11-215ENST00000494942 PDE1AP54750 535 aa18.27■□□□□ 0.51
UBXN11-215ENST00000494942 G2E3Q7L622 706 aa18.27■□□□□ 0.51
UBXN11-215ENST00000494942 GAS2L3Q86XJ1 694 aa18.27■□□□□ 0.51
UBXN11-215ENST00000494942 THEMISQ8N1K5 641 aaPredicted RBP18.27■□□□□ 0.51
UBXN11-215ENST00000494942 CYP2E1P05181 493 aaPredicted RBP18.26■□□□□ 0.51
UBXN11-215ENST00000494942 AMPHP49418 695 aa18.26■□□□□ 0.51
UBXN11-215ENST00000494942 GNAI3P08754 354 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms