RNA–Protein interactions for RNA: ENST00000490439.1

NUP205-208, Transcript of nucleoporin 205, humanhuman

TSL 3

Gene NUP205, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP205-208ENST00000490439 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
NUP205-208ENST00000490439 Q3C1V9 767 aa11.92□□□□□ -0.5
NUP205-208ENST00000490439 CCDC24Q8N4L8 307 aa11.92□□□□□ -0.5
NUP205-208ENST00000490439 ALKQ9UM73 1620 aa11.92□□□□□ -0.5
NUP205-208ENST00000490439 PZPP20742 1482 aa11.91□□□□□ -0.5
NUP205-208ENST00000490439 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
NUP205-208ENST00000490439 ANKLE2Q86XL3 938 aa11.91□□□□□ -0.5
NUP205-208ENST00000490439 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
NUP205-208ENST00000490439 FAM135AQ9P2D6 1515 aa11.91□□□□□ -0.5
NUP205-208ENST00000490439 DNMT1P26358 1616 aaKnown RBP11.9□□□□□ -0.5
NUP205-208ENST00000490439 PIP4K2BP78356 416 aa11.9□□□□□ -0.5
NUP205-208ENST00000490439 RGS17Q9UGC6 210 aaPredicted RBP11.9□□□□□ -0.5
NUP205-208ENST00000490439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.9□□□□□ -0.5
NUP205-208ENST00000490439 VPS8Q8N3P4 1428 aa11.89□□□□□ -0.51
NUP205-208ENST00000490439 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
NUP205-208ENST00000490439 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
NUP205-208ENST00000490439 MIA2Q96PC5 1412 aa11.88□□□□□ -0.51
NUP205-208ENST00000490439 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
NUP205-208ENST00000490439 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
NUP205-208ENST00000490439 LOC105371045A0A1W2PR82 267 aa11.87□□□□□ -0.51
NUP205-208ENST00000490439 TOM1O60784 492 aa11.87□□□□□ -0.51
NUP205-208ENST00000490439 MMP16P51512 607 aa11.87□□□□□ -0.51
NUP205-208ENST00000490439 NXF1Q9UBU9 619 aaKnown RBP11.87□□□□□ -0.51
NUP205-208ENST00000490439 ALDH1A1P00352 501 aa11.86□□□□□ -0.51
NUP205-208ENST00000490439 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
NUP205-208ENST00000490439 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
NUP205-208ENST00000490439 CPS1P31327 1500 aa11.86□□□□□ -0.51
NUP205-208ENST00000490439 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
NUP205-208ENST00000490439 GMPRP36959 345 aa11.85□□□□□ -0.51
NUP205-208ENST00000490439 ZSCAN1Q8NBB4 408 aa11.85□□□□□ -0.51
NUP205-208ENST00000490439 USB1Q9BQ65 265 aaKnown RBP11.85□□□□□ -0.51
NUP205-208ENST00000490439 NPHP4O75161 1426 aaPredicted RBP11.85□□□□□ -0.51
NUP205-208ENST00000490439 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
NUP205-208ENST00000490439 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
NUP205-208ENST00000490439 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
NUP205-208ENST00000490439 IRF7Q92985 503 aa11.83□□□□□ -0.52
NUP205-208ENST00000490439 MYOM3Q5VTT5 1437 aa11.83□□□□□ -0.52
NUP205-208ENST00000490439 NEURL4Q96JN8 1562 aa11.83□□□□□ -0.52
NUP205-208ENST00000490439 ABCC3O15438 1527 aa11.82□□□□□ -0.52
NUP205-208ENST00000490439 VEGFBP49765 207 aa11.82□□□□□ -0.52
NUP205-208ENST00000490439 PHOX2BQ99453 314 aa11.82□□□□□ -0.52
NUP205-208ENST00000490439 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
NUP205-208ENST00000490439 DXOO77932 396 aaKnown RBP11.81□□□□□ -0.52
NUP205-208ENST00000490439 RNF17Q9BXT8 1623 aaKnown RBP11.81□□□□□ -0.52
NUP205-208ENST00000490439 BMP1P13497 986 aa11.8□□□□□ -0.52
NUP205-208ENST00000490439 WNT7BP56706 349 aa11.8□□□□□ -0.52
NUP205-208ENST00000490439 SKOR1P84550 965 aa11.8□□□□□ -0.52
NUP205-208ENST00000490439 ERVK-7P63135 1459 aa11.8□□□□□ -0.52
NUP205-208ENST00000490439 ZC3H13Q5T200 1668 aaKnown RBP11.8□□□□□ -0.52
NUP205-208ENST00000490439 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
NUP205-208ENST00000490439 DUOX2Q9NRD8 1548 aa11.8□□□□□ -0.52
NUP205-208ENST00000490439 KIF15Q9NS87 1388 aa11.79□□□□□ -0.52
NUP205-208ENST00000490439 EIF2AK4Q9P2K8 1649 aaKnown RBP11.79□□□□□ -0.52
NUP205-208ENST00000490439 MED14O60244 1454 aa11.79□□□□□ -0.52
NUP205-208ENST00000490439 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
NUP205-208ENST00000490439 KANK1Q14678 1352 aa11.79□□□□□ -0.52
NUP205-208ENST00000490439 EID1Q9Y6B2 187 aa11.78□□□□□ -0.52
NUP205-208ENST00000490439 WASF2Q9Y6W5 498 aa11.78□□□□□ -0.52
NUP205-208ENST00000490439 VWDEQ8N2E2 1590 aa11.78□□□□□ -0.52
NUP205-208ENST00000490439 DEPDC5O75140 1603 aa11.78□□□□□ -0.52
NUP205-208ENST00000490439 CAPN5O15484 640 aaPredicted RBP11.77□□□□□ -0.53
NUP205-208ENST00000490439 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
NUP205-208ENST00000490439 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
NUP205-208ENST00000490439 KDM4AO75164 1064 aa11.76□□□□□ -0.53
NUP205-208ENST00000490439 POTEAQ6S8J7 498 aa11.76□□□□□ -0.53
NUP205-208ENST00000490439 EHBP1Q8NDI1 1231 aa11.76□□□□□ -0.53
NUP205-208ENST00000490439 ERBINQ96RT1 1412 aa11.76□□□□□ -0.53
NUP205-208ENST00000490439 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
NUP205-208ENST00000490439 GPR37O15354 613 aa11.75□□□□□ -0.53
NUP205-208ENST00000490439 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
NUP205-208ENST00000490439 CHIC2Q9UKJ5 165 aa11.75□□□□□ -0.53
NUP205-208ENST00000490439 SCAF11Q99590 1463 aaKnown RBP11.75□□□□□ -0.53
NUP205-208ENST00000490439 ABCC5O15440 1437 aa11.74□□□□□ -0.53
NUP205-208ENST00000490439 MROH1Q8NDA8 1641 aa11.74□□□□□ -0.53
NUP205-208ENST00000490439 CEP152O94986 1710 aa11.74□□□□□ -0.53
NUP205-208ENST00000490439 TRIM46Q7Z4K8 759 aa11.73□□□□□ -0.53
NUP205-208ENST00000490439 LRRC7Q96NW7 1537 aa11.73□□□□□ -0.53
NUP205-208ENST00000490439 ANKRD30AQ9BXX3 1397 aa11.73□□□□□ -0.53
NUP205-208ENST00000490439 PTPN23Q9H3S7 1636 aa11.73□□□□□ -0.53
NUP205-208ENST00000490439 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
NUP205-208ENST00000490439 SYNMO15061 1565 aa11.72□□□□□ -0.53
NUP205-208ENST00000490439 PRDM15P57071 1507 aaPredicted RBP11.72□□□□□ -0.53
NUP205-208ENST00000490439 DAPK1P53355 1430 aa11.72□□□□□ -0.53
NUP205-208ENST00000490439 ARHGAP31Q2M1Z3 1444 aa11.72□□□□□ -0.53
NUP205-208ENST00000490439 FGD6Q6ZV73 1430 aa11.72□□□□□ -0.53
NUP205-208ENST00000490439 CD46P15529 392 aa11.72□□□□□ -0.53
NUP205-208ENST00000490439 LTKP29376 864 aa11.72□□□□□ -0.53
NUP205-208ENST00000490439 HLA-CQ95604 372 aa11.72□□□□□ -0.53
NUP205-208ENST00000490439 BCANQ96GW7 911 aa11.72□□□□□ -0.53
NUP205-208ENST00000490439 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.54
NUP205-208ENST00000490439 H3BM21 787 aa11.7□□□□□ -0.54
NUP205-208ENST00000490439 LORP23490 312 aaPredicted RBP11.7□□□□□ -0.54
NUP205-208ENST00000490439 FAM50AQ14320 339 aaKnown RBP11.7□□□□□ -0.54
NUP205-208ENST00000490439 TMEM2Q9UHN6 1383 aa11.69□□□□□ -0.54
NUP205-208ENST00000490439 CROCC2H7BZ55 1655 aa11.69□□□□□ -0.54
NUP205-208ENST00000490439 SLIT1O75093 1534 aa11.69□□□□□ -0.54
NUP205-208ENST00000490439 STRCP1A6NGW2 1772 aa11.69□□□□□ -0.54
NUP205-208ENST00000490439 ARHGAP23Q9P227 1491 aa11.69□□□□□ -0.54
NUP205-208ENST00000490439 SETD1AO15047 1707 aaKnown RBP11.69□□□□□ -0.54
NUP205-208ENST00000490439 ERBB4Q15303 1308 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms