RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 HYPKQ9NX55 129 aa11.27□□□□□ -0.61
GARNL3-216ENST00000481242 CEBPAP49715 358 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-216ENST00000481242 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
GARNL3-216ENST00000481242 IFNL2Q8IZJ0 200 aa11.26□□□□□ -0.61
GARNL3-216ENST00000481242 CDK5RAP3Q96JB5 506 aa11.26□□□□□ -0.61
GARNL3-216ENST00000481242 WDHD1O75717 1129 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-216ENST00000481242 CNKSR2Q8WXI2 1034 aa11.26□□□□□ -0.61
GARNL3-216ENST00000481242 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
GARNL3-216ENST00000481242 DBF4Q9UBU7 674 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-216ENST00000481242 GPATCH8Q9UKJ3 1502 aaKnown RBP11.26□□□□□ -0.61
GARNL3-216ENST00000481242 DHX8Q14562 1220 aaKnown RBP11.25□□□□□ -0.61
GARNL3-216ENST00000481242 RRP12Q5JTH9 1297 aaKnown RBP11.25□□□□□ -0.61
GARNL3-216ENST00000481242 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
GARNL3-216ENST00000481242 PUS7Q96PZ0 661 aaKnown RBP11.25□□□□□ -0.61
GARNL3-216ENST00000481242 NOS1P29475 1434 aa11.25□□□□□ -0.61
GARNL3-216ENST00000481242 A2MP01023 1474 aa11.25□□□□□ -0.61
GARNL3-216ENST00000481242 OFD1O75665 1012 aa11.25□□□□□ -0.61
GARNL3-216ENST00000481242 CAVIN4Q5BKX8 364 aa11.25□□□□□ -0.61
GARNL3-216ENST00000481242 AACSQ86V21 672 aa11.25□□□□□ -0.61
GARNL3-216ENST00000481242 KINO60870 393 aaKnown RBP11.25□□□□□ -0.61
GARNL3-216ENST00000481242 EPS15P42566 896 aa11.25□□□□□ -0.61
GARNL3-216ENST00000481242 NME9Q86XW9 330 aa11.25□□□□□ -0.61
GARNL3-216ENST00000481242 SLFN5Q08AF3 891 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
GARNL3-216ENST00000481242 SIL1Q9H173 461 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 LRP2BPQ9P2M1 347 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 A0A087WZG4 1122 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 GLRX3O76003 335 aaKnown RBP11.24□□□□□ -0.61
GARNL3-216ENST00000481242 DUOX2Q9NRD8 1548 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 CCDC69A6NI79 296 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 PTCD1O75127 700 aaKnown RBP11.24□□□□□ -0.61
GARNL3-216ENST00000481242 IL27Q8NEV9 243 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 RPRD2Q5VT52 1461 aaKnown RBP11.24□□□□□ -0.61
GARNL3-216ENST00000481242 WDR7Q9Y4E6 1490 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 ANKRD36BQ8N2N9 1353 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 RBM5P52756 815 aaKnown RBP eCLIP11.24□□□□□ -0.61
GARNL3-216ENST00000481242 NFKBIBQ15653 356 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 UBAC1Q9BSL1 405 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 BACH2Q9BYV9 841 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 RAI14Q9P0K7 980 aa11.24□□□□□ -0.61
GARNL3-216ENST00000481242 NOL7Q9UMY1 257 aaKnown RBP11.24□□□□□ -0.61
GARNL3-216ENST00000481242 ATP10BO94823 1461 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 ABCC10Q5T3U5 1492 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 ADAMTS2O95450 1211 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 CT47A1Q5JQC4 288 aaPredicted RBP11.23□□□□□ -0.61
GARNL3-216ENST00000481242 WASF1Q92558 559 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 BCAR3O75815 825 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 METTL24Q5JXM2 366 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 BLOC1S2Q6QNY1 142 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 CCDC66A2RUB6 948 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 TDO2P48775 406 aa11.23□□□□□ -0.61
GARNL3-216ENST00000481242 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
GARNL3-216ENST00000481242 RDXP35241 583 aaKnown RBP11.23□□□□□ -0.61
GARNL3-216ENST00000481242 STK38Q15208 465 aa11.22□□□□□ -0.61
GARNL3-216ENST00000481242 ODF2Q5BJF6 829 aa11.22□□□□□ -0.61
GARNL3-216ENST00000481242 IFIT5Q13325 482 aaKnown RBP11.22□□□□□ -0.61
GARNL3-216ENST00000481242 FILIP1LQ4L180 1135 aa11.22□□□□□ -0.61
GARNL3-216ENST00000481242 ZSCAN29Q8IWY8 852 aaPredicted RBP11.22□□□□□ -0.61
GARNL3-216ENST00000481242 C1orf115Q9H7X2 142 aa11.22□□□□□ -0.61
GARNL3-216ENST00000481242 MTMR7Q9Y216 660 aa11.22□□□□□ -0.61
GARNL3-216ENST00000481242 PTPRCP08575 1304 aa11.22□□□□□ -0.61
GARNL3-216ENST00000481242 ATP2B2Q01814 1243 aa11.21□□□□□ -0.61
GARNL3-216ENST00000481242 RAPGEF6Q8TEU7 1601 aa11.21□□□□□ -0.61
GARNL3-216ENST00000481242 NUP160Q12769 1436 aa11.21□□□□□ -0.61
GARNL3-216ENST00000481242 AIDAQ96BJ3 306 aa11.21□□□□□ -0.61
GARNL3-216ENST00000481242 DNAAF4Q8WXU2 420 aa11.21□□□□□ -0.62
GARNL3-216ENST00000481242 ACEP12821 1306 aa11.21□□□□□ -0.62
GARNL3-216ENST00000481242 IL16Q14005 1332 aa11.21□□□□□ -0.62
GARNL3-216ENST00000481242 WDR33Q9C0J8 1336 aaKnown RBP11.21□□□□□ -0.62
GARNL3-216ENST00000481242 KRT18P05783 430 aaKnown RBP11.2□□□□□ -0.62
GARNL3-216ENST00000481242 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 STIM1Q13586 685 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 IMMTQ16891 758 aaKnown RBP11.2□□□□□ -0.62
GARNL3-216ENST00000481242 HOMER1Q86YM7 354 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 MRE11P49959 708 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 MPRIPQ6WCQ1 1025 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 SMARCC1Q92922 1105 aaPredicted RBP11.2□□□□□ -0.62
GARNL3-216ENST00000481242 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 U3KPZ7 1027 aaPredicted RBP11.2□□□□□ -0.62
GARNL3-216ENST00000481242 BICDL1Q6ZP65 573 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
GARNL3-216ENST00000481242 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
GARNL3-216ENST00000481242 MAP3K12Q12852 859 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
GARNL3-216ENST00000481242 MCM10Q7L590 875 aa11.19□□□□□ -0.62
GARNL3-216ENST00000481242 CCAR2Q8N163 923 aaKnown RBP11.19□□□□□ -0.62
GARNL3-216ENST00000481242 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
GARNL3-216ENST00000481242 IDH1O75874 414 aaKnown RBP11.19□□□□□ -0.62
GARNL3-216ENST00000481242 SLC5A1P13866 664 aa11.19□□□□□ -0.62
GARNL3-216ENST00000481242 TMEM132AQ24JP5 1023 aa11.19□□□□□ -0.62
GARNL3-216ENST00000481242 MAGEC2Q9UBF1 373 aaPredicted RBP11.19□□□□□ -0.62
GARNL3-216ENST00000481242 CCDC196A0A1B0GTZ2 297 aa11.19□□□□□ -0.62
GARNL3-216ENST00000481242 ANKRD18BA2A2Z9 1011 aa11.19□□□□□ -0.62
GARNL3-216ENST00000481242 LDHCP07864 332 aa11.19□□□□□ -0.62
GARNL3-216ENST00000481242 CDR1P51861 262 aa11.19□□□□□ -0.62
GARNL3-216ENST00000481242 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
GARNL3-216ENST00000481242 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms