RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 INTS3Q68E01 1043 aaKnown RBP10.74□□□□□ -0.69
PKP4-210ENST00000480171 PLEKHM2Q8IWE5 1019 aa10.74□□□□□ -0.69
PKP4-210ENST00000480171 RPAP2Q8IXW5 612 aaPredicted RBP10.74□□□□□ -0.69
PKP4-210ENST00000480171 TRIM44Q96DX7 344 aaPredicted RBP10.74□□□□□ -0.69
PKP4-210ENST00000480171 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
PKP4-210ENST00000480171 BCCIPQ9P287 314 aaKnown RBP eCLIP10.74□□□□□ -0.69
PKP4-210ENST00000480171 NPM3O75607 178 aaKnown RBP10.73□□□□□ -0.69
PKP4-210ENST00000480171 TTC22Q5TAA0 569 aa10.73□□□□□ -0.69
PKP4-210ENST00000480171 TMED8Q6PL24 325 aaPredicted RBP10.73□□□□□ -0.69
PKP4-210ENST00000480171 CCDC61Q9Y6R9 512 aa10.73□□□□□ -0.69
PKP4-210ENST00000480171 DLG5Q8TDM6 1919 aa10.73□□□□□ -0.69
PKP4-210ENST00000480171 RIMBP3CA6NJZ7 1639 aa10.73□□□□□ -0.69
PKP4-210ENST00000480171 RIMBP3BA6NNM3 1639 aa10.73□□□□□ -0.69
PKP4-210ENST00000480171 RIMBP3Q9UFD9 1639 aa10.73□□□□□ -0.69
PKP4-210ENST00000480171 ANKRD44Q8N8A2 993 aa10.73□□□□□ -0.69
PKP4-210ENST00000480171 RBM42Q9BTD8 480 aaKnown RBP10.72□□□□□ -0.69
PKP4-210ENST00000480171 ZRANB1Q9UGI0 708 aa10.72□□□□□ -0.69
PKP4-210ENST00000480171 FAM83GA6ND36 823 aa10.72□□□□□ -0.69
PKP4-210ENST00000480171 CD2BP2O95400 341 aaKnown RBP10.72□□□□□ -0.69
PKP4-210ENST00000480171 GSPT1P15170 499 aaKnown RBP10.72□□□□□ -0.69
PKP4-210ENST00000480171 HDGFP51858 240 aaKnown RBP10.72□□□□□ -0.69
PKP4-210ENST00000480171 NUCB2P80303 420 aa10.72□□□□□ -0.69
PKP4-210ENST00000480171 RRS1Q15050 365 aaKnown RBP10.72□□□□□ -0.69
PKP4-210ENST00000480171 CLEC17AQ6ZS10 378 aa10.72□□□□□ -0.69
PKP4-210ENST00000480171 GAS2L2Q8NHY3 880 aa10.72□□□□□ -0.69
PKP4-210ENST00000480171 SIRT1Q96EB6 747 aa10.72□□□□□ -0.69
PKP4-210ENST00000480171 SETD1AO15047 1707 aaKnown RBP10.72□□□□□ -0.69
PKP4-210ENST00000480171 SPATA31D1Q6ZQQ2 1576 aa10.72□□□□□ -0.69
PKP4-210ENST00000480171 AGLP35573 1532 aa10.71□□□□□ -0.69
PKP4-210ENST00000480171 DCTN1Q14203 1278 aa10.71□□□□□ -0.69
PKP4-210ENST00000480171 ANP32BQ92688 251 aaKnown RBP10.71□□□□□ -0.69
PKP4-210ENST00000480171 PTPRCP08575 1304 aa10.71□□□□□ -0.7
PKP4-210ENST00000480171 MON2Q7Z3U7 1717 aa10.71□□□□□ -0.7
PKP4-210ENST00000480171 SSFA2P28290 1259 aa10.71□□□□□ -0.7
PKP4-210ENST00000480171 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.7
PKP4-210ENST00000480171 KIAA0232Q92628 1395 aa10.7□□□□□ -0.7
PKP4-210ENST00000480171 ZNF592Q92610 1267 aa10.7□□□□□ -0.7
PKP4-210ENST00000480171 ESPNB1AK53 854 aa10.7□□□□□ -0.7
PKP4-210ENST00000480171 HMMRO75330 724 aa10.7□□□□□ -0.7
PKP4-210ENST00000480171 HMGB1P09429 215 aaKnown RBP10.7□□□□□ -0.7
PKP4-210ENST00000480171 KLHL40Q2TBA0 621 aa10.7□□□□□ -0.7
PKP4-210ENST00000480171 SULT6B1Q6IMI4 303 aa10.7□□□□□ -0.7
PKP4-210ENST00000480171 CWC22Q9HCG8 908 aaKnown RBP10.7□□□□□ -0.7
PKP4-210ENST00000480171 DDX49Q9Y6V7 483 aaKnown RBP10.7□□□□□ -0.7
PKP4-210ENST00000480171 CPS1P31327 1500 aa10.69□□□□□ -0.7
PKP4-210ENST00000480171 ITSN1Q15811 1721 aa10.69□□□□□ -0.7
PKP4-210ENST00000480171 CHL1O00533 1208 aa10.69□□□□□ -0.7
PKP4-210ENST00000480171 ST18O60284 1047 aa10.69□□□□□ -0.7
PKP4-210ENST00000480171 REC8O95072 547 aa10.69□□□□□ -0.7
PKP4-210ENST00000480171 BAG4O95429 457 aaKnown RBP10.69□□□□□ -0.7
PKP4-210ENST00000480171 USP26Q9BXU7 913 aa10.69□□□□□ -0.7
PKP4-210ENST00000480171 KNDC1Q76NI1 1749 aa10.69□□□□□ -0.7
PKP4-210ENST00000480171 RBM10P98175 930 aaKnown RBP10.69□□□□□ -0.7
PKP4-210ENST00000480171 FAM69CQ0P6D2 419 aa10.69□□□□□ -0.7
PKP4-210ENST00000480171 CEP85Q6P2H3 762 aa10.69□□□□□ -0.7
PKP4-210ENST00000480171 IBTKQ9P2D0 1353 aaPredicted RBP10.69□□□□□ -0.7
PKP4-210ENST00000480171 EIF4A2Q14240 407 aaKnown RBP10.68□□□□□ -0.7
PKP4-210ENST00000480171 GAS2L3Q86XJ1 694 aa10.68□□□□□ -0.7
PKP4-210ENST00000480171 METP08581 1390 aa10.68□□□□□ -0.7
PKP4-210ENST00000480171 ATP10DQ9P241 1426 aa10.68□□□□□ -0.7
PKP4-210ENST00000480171 AKAP12Q02952 1782 aa10.68□□□□□ -0.7
PKP4-210ENST00000480171 NRKQ7Z2Y5 1582 aa10.68□□□□□ -0.7
PKP4-210ENST00000480171 CCDC173Q0VFZ6 552 aa10.68□□□□□ -0.7
PKP4-210ENST00000480171 C16orf71Q8IYS4 520 aaPredicted RBP10.68□□□□□ -0.7
PKP4-210ENST00000480171 C3P01024 1663 aa10.68□□□□□ -0.7
PKP4-210ENST00000480171 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
PKP4-210ENST00000480171 RTL1A6NKG5 1358 aa10.67□□□□□ -0.7
PKP4-210ENST00000480171 SDSP20132 328 aa10.67□□□□□ -0.7
PKP4-210ENST00000480171 TECPR2O15040 1411 aa10.67□□□□□ -0.7
PKP4-210ENST00000480171 AEBP1Q8IUX7 1158 aa10.66□□□□□ -0.7
PKP4-210ENST00000480171 PRDM10Q9NQV6 1147 aa10.66□□□□□ -0.7
PKP4-210ENST00000480171 MSH6P52701 1360 aa10.66□□□□□ -0.7
PKP4-210ENST00000480171 NRXN3Q9Y4C0 1643 aa10.66□□□□□ -0.7
PKP4-210ENST00000480171 RGS12O14924 1447 aa10.66□□□□□ -0.7
PKP4-210ENST00000480171 NCKAP5LQ9HCH0 1330 aa10.66□□□□□ -0.7
PKP4-210ENST00000480171 APBB1O00213 710 aa10.66□□□□□ -0.7
PKP4-210ENST00000480171 NASPP49321 788 aaPredicted RBP10.66□□□□□ -0.7
PKP4-210ENST00000480171 MCTP1Q6DN14 999 aa10.66□□□□□ -0.7
PKP4-210ENST00000480171 TTC21BQ7Z4L5 1316 aa10.66□□□□□ -0.7
PKP4-210ENST00000480171 ERC2O15083 957 aa10.65□□□□□ -0.7
PKP4-210ENST00000480171 CCT4P50991 539 aaKnown RBP10.65□□□□□ -0.7
PKP4-210ENST00000480171 MLECQ14165 292 aa10.65□□□□□ -0.7
PKP4-210ENST00000480171 MCM10Q7L590 875 aa10.65□□□□□ -0.7
PKP4-210ENST00000480171 SLC4A2P04920 1241 aa10.65□□□□□ -0.7
PKP4-210ENST00000480171 RTF1Q92541 710 aaKnown RBP10.65□□□□□ -0.7
PKP4-210ENST00000480171 MEIS3Q99687 375 aa10.65□□□□□ -0.7
PKP4-210ENST00000480171 SMARCA5O60264 1052 aaPredicted RBP10.65□□□□□ -0.71
PKP4-210ENST00000480171 NCLP19338 710 aaKnown RBP10.65□□□□□ -0.71
PKP4-210ENST00000480171 KRT24Q2M2I5 525 aa10.65□□□□□ -0.71
PKP4-210ENST00000480171 OTUD7AQ8TE49 926 aaPredicted RBP10.65□□□□□ -0.71
PKP4-210ENST00000480171 PPP1R9BQ96SB3 815 aa10.64□□□□□ -0.71
PKP4-210ENST00000480171 PRR36Q9H6K5 1346 aa10.64□□□□□ -0.71
PKP4-210ENST00000480171 CYP2E1P05181 493 aaPredicted RBP10.64□□□□□ -0.71
PKP4-210ENST00000480171 ZNF445P59923 1031 aa10.64□□□□□ -0.71
PKP4-210ENST00000480171 OSBPL3Q9H4L5 887 aa10.64□□□□□ -0.71
PKP4-210ENST00000480171 ACEP12821 1306 aa10.63□□□□□ -0.71
PKP4-210ENST00000480171 MCCP23508 829 aa10.63□□□□□ -0.71
PKP4-210ENST00000480171 MCM2P49736 904 aa10.63□□□□□ -0.71
PKP4-210ENST00000480171 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
PKP4-210ENST00000480171 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms