RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 EMILIN1Q9Y6C2 1016 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 PDE4AP27815 886 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 ZKSCAN2Q63HK3 967 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 ZNF622Q969S3 477 aaKnown RBP eCLIP7.39□□□□□ -1.23
CPS1-207ENST00000479988 ANO8Q9HCE9 1232 aaPredicted RBP7.39□□□□□ -1.23
CPS1-207ENST00000479988 PCDH11XQ9BZA7 1347 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 PCDH11YQ9BZA8 1340 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 PLIN1O60240 522 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 LRRFIP1Q32MZ4 808 aaKnown RBP7.39□□□□□ -1.23
CPS1-207ENST00000479988 DUSP27Q5VZP5 1158 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 ZNF428Q96B54 188 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 FCHSD2O94868 740 aa7.38□□□□□ -1.23
CPS1-207ENST00000479988 ZFYVE9O95405 1425 aa7.38□□□□□ -1.23
CPS1-207ENST00000479988 API5Q9BZZ5 524 aaKnown RBP7.38□□□□□ -1.23
CPS1-207ENST00000479988 CAMSAP1Q5T5Y3 1602 aa7.38□□□□□ -1.23
CPS1-207ENST00000479988 E9PCH4 1651 aa7.38□□□□□ -1.23
CPS1-207ENST00000479988 MYL6BP14649 208 aa7.38□□□□□ -1.23
CPS1-207ENST00000479988 KDM5AP29375 1690 aaKnown RBP7.38□□□□□ -1.23
CPS1-207ENST00000479988 NKTRP30414 1462 aaKnown RBP7.38□□□□□ -1.23
CPS1-207ENST00000479988 RGS3P49796 1198 aa7.38□□□□□ -1.23
CPS1-207ENST00000479988 CCDC27Q2M243 656 aa7.38□□□□□ -1.23
CPS1-207ENST00000479988 IP6K1Q92551 441 aa7.38□□□□□ -1.23
CPS1-207ENST00000479988 MPHOSPH8Q99549 860 aa7.38□□□□□ -1.23
CPS1-207ENST00000479988 CLTCL1P53675 1640 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 MAP3K4Q9Y6R4 1608 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 WWC1Q8IX03 1113 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 CCAR1Q8IX12 1150 aaKnown RBP7.37□□□□□ -1.23
CPS1-207ENST00000479988 UBE2Q2Q8WVN8 375 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 FLT4P35916 1363 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 HMGB1P09429 215 aaKnown RBP7.37□□□□□ -1.23
CPS1-207ENST00000479988 FAM161AQ3B820 660 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 MADDQ8WXG6 1647 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 METP08581 1390 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 ZNF219Q9P2Y4 722 aaPredicted RBP7.37□□□□□ -1.23
CPS1-207ENST00000479988 KIAA1210Q9ULL0 1709 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 VWDEQ8N2E2 1590 aa7.37□□□□□ -1.23
CPS1-207ENST00000479988 PLEKHG3A1L390 1219 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 TRIM37O94972 964 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 RNF17Q9BXT8 1623 aaKnown RBP7.36□□□□□ -1.23
CPS1-207ENST00000479988 KIF16BQ96L93 1317 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 TRAPPC3LQ5T215 181 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 DHX37Q8IY37 1157 aaKnown RBP7.36□□□□□ -1.23
CPS1-207ENST00000479988 DDX19BQ9UMR2 479 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 CARD14Q9BXL6 1004 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 TMOD2Q9NZR1 351 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 GNPATO15228 680 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 ILDR1Q86SU0 546 aaPredicted RBP7.36□□□□□ -1.23
CPS1-207ENST00000479988 CLUAP1Q96AJ1 413 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 GNL3LQ9NVN8 582 aaKnown RBP7.36□□□□□ -1.23
CPS1-207ENST00000479988 NAP1L2Q9ULW6 460 aaPredicted RBP7.36□□□□□ -1.23
CPS1-207ENST00000479988 DEPDC5O75140 1603 aa7.36□□□□□ -1.23
CPS1-207ENST00000479988 DIP2CQ9Y2E4 1556 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 G3BP1Q13283 466 aaKnown RBP eCLIP7.35□□□□□ -1.23
CPS1-207ENST00000479988 NBPF6Q5VWK0 638 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 NBPF5PQ86XG9 351 aaPredicted RBP7.35□□□□□ -1.23
CPS1-207ENST00000479988 NBPF4Q96M43 638 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 SETDB2Q96T68 719 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 CNNM1Q9NRU3 951 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 CEP152O94986 1710 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 SETBP1Q9Y6X0 1596 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 TAF7Q15545 349 aaPredicted RBP7.35□□□□□ -1.23
CPS1-207ENST00000479988 HSP90AB2PQ58FF8 381 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 CLEC11AQ9Y240 323 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 DZIP1LQ8IYY4 767 aaKnown RBP7.35□□□□□ -1.23
CPS1-207ENST00000479988 IL16Q14005 1332 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 IGHMBP2P38935 993 aaKnown RBP7.35□□□□□ -1.23
CPS1-207ENST00000479988 KIAA1211Q6ZU35 1233 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 DCAF5Q96JK2 942 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 GJD4Q96KN9 370 aaPredicted RBP7.35□□□□□ -1.23
CPS1-207ENST00000479988 ADGRL3Q9HAR2 1447 aa7.35□□□□□ -1.23
CPS1-207ENST00000479988 PPP1R42Q7Z4L9 355 aa7.34□□□□□ -1.23
CPS1-207ENST00000479988 TOMM22Q9NS69 142 aa7.34□□□□□ -1.23
CPS1-207ENST00000479988 CCDC87Q9NVE4 849 aa7.34□□□□□ -1.23
CPS1-207ENST00000479988 SPATA31A3Q5VYP0 1347 aa7.34□□□□□ -1.23
CPS1-207ENST00000479988 RBM5P52756 815 aaKnown RBP eCLIP7.34□□□□□ -1.23
CPS1-207ENST00000479988 JDP2Q8WYK2 163 aa7.34□□□□□ -1.23
CPS1-207ENST00000479988 KIAA0232Q92628 1395 aa7.34□□□□□ -1.24
CPS1-207ENST00000479988 COG6Q9Y2V7 657 aa7.34□□□□□ -1.24
CPS1-207ENST00000479988 ADGRB3O60242 1522 aa7.33□□□□□ -1.24
CPS1-207ENST00000479988 PRIM1P49642 420 aaKnown RBP7.33□□□□□ -1.24
CPS1-207ENST00000479988 NFE2L2Q16236 605 aa7.33□□□□□ -1.24
CPS1-207ENST00000479988 THRAP3Q9Y2W1 955 aaKnown RBP7.33□□□□□ -1.24
CPS1-207ENST00000479988 SNRPA1P09661 255 aaKnown RBP7.33□□□□□ -1.24
CPS1-207ENST00000479988 TTLL12Q14166 644 aaPredicted RBP7.33□□□□□ -1.24
CPS1-207ENST00000479988 DDX46Q7L014 1031 aaKnown RBP7.33□□□□□ -1.24
CPS1-207ENST00000479988 FYB1O15117 783 aa7.33□□□□□ -1.24
CPS1-207ENST00000479988 TMPOP42166 694 aaKnown RBP7.33□□□□□ -1.24
CPS1-207ENST00000479988 CCDC57Q2TAC2 916 aa7.33□□□□□ -1.24
CPS1-207ENST00000479988 HSP90AB4PQ58FF6 505 aa7.33□□□□□ -1.24
CPS1-207ENST00000479988 LARP1Q6PKG0 1096 aaKnown RBP7.33□□□□□ -1.24
CPS1-207ENST00000479988 BACH2Q9BYV9 841 aa7.33□□□□□ -1.24
CPS1-207ENST00000479988 KIDINS220Q9ULH0 1771 aa7.33□□□□□ -1.24
CPS1-207ENST00000479988 ROBO2Q9HCK4 1378 aa7.33□□□□□ -1.24
CPS1-207ENST00000479988 BRD2P25440 801 aaKnown RBP7.32□□□□□ -1.24
CPS1-207ENST00000479988 HOXC9P31274 260 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 TRMT112Q9UI30 125 aaKnown RBP7.32□□□□□ -1.24
CPS1-207ENST00000479988 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 MAP3K19Q56UN5 1328 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 C6orf229H3BNL8 230 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 UBTFL1P0CB47 393 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms