RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 VSIG10Q8N0Z9 540 aa19.67■□□□□ 0.74
TSPAN4-211ENST00000468468 FSD2A1L4K1 749 aa19.66■□□□□ 0.74
TSPAN4-211ENST00000468468 DDX11L8A8MPP1 907 aa19.66■□□□□ 0.74
TSPAN4-211ENST00000468468 XRCC6P12956 609 aaKnown RBP eCLIP19.66■□□□□ 0.74
TSPAN4-211ENST00000468468 KIF2CQ99661 725 aa19.66■□□□□ 0.74
TSPAN4-211ENST00000468468 ZMYND15Q9H091 742 aa19.66■□□□□ 0.74
TSPAN4-211ENST00000468468 DIP2AQ14689 1571 aa19.66■□□□□ 0.74
TSPAN4-211ENST00000468468 OVOS2A0A0J9YW53 1432 aa19.66■□□□□ 0.74
TSPAN4-211ENST00000468468 OVOS2Q6IE36 1432 aa19.66■□□□□ 0.74
TSPAN4-211ENST00000468468 DLG5Q8TDM6 1919 aa19.65■□□□□ 0.74
TSPAN4-211ENST00000468468 NGDNQ8NEJ9 315 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-211ENST00000468468 XRN1Q8IZH2 1706 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-211ENST00000468468 SSH2Q76I76 1423 aa19.64■□□□□ 0.73
TSPAN4-211ENST00000468468 EIF4A2Q14240 407 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-211ENST00000468468 RGPD8O14715 1765 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-211ENST00000468468 AEBP1Q8IUX7 1158 aa19.63■□□□□ 0.73
TSPAN4-211ENST00000468468 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-211ENST00000468468 CIZ1Q9ULV3 898 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-211ENST00000468468 HSP90AB2PQ58FF8 381 aa19.62■□□□□ 0.73
TSPAN4-211ENST00000468468 TNPO1Q92973 898 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-211ENST00000468468 HSP90AA1P07900 732 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-211ENST00000468468 CDC45O75419 566 aa19.61■□□□□ 0.73
TSPAN4-211ENST00000468468 CD2BP2O95400 341 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-211ENST00000468468 KIF24Q5T7B8 1368 aa19.61■□□□□ 0.73
TSPAN4-211ENST00000468468 ANKLE2Q86XL3 938 aa19.61■□□□□ 0.73
TSPAN4-211ENST00000468468 RBM42Q9BTD8 480 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-211ENST00000468468 FOXD4L1Q9NU39 408 aa19.61■□□□□ 0.73
TSPAN4-211ENST00000468468 SULT6B1Q6IMI4 303 aa19.6■□□□□ 0.73
TSPAN4-211ENST00000468468 K7ELQ4 463 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-211ENST00000468468 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
TSPAN4-211ENST00000468468 PLEKHM2Q8IWE5 1019 aa19.6■□□□□ 0.73
TSPAN4-211ENST00000468468 PANK2Q9BZ23 570 aa19.6■□□□□ 0.73
TSPAN4-211ENST00000468468 DCTPP1Q9H773 170 aa19.6■□□□□ 0.73
TSPAN4-211ENST00000468468 GSPT1P15170 499 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-211ENST00000468468 RAB3GAP1Q15042 981 aa19.59■□□□□ 0.73
TSPAN4-211ENST00000468468 USP31Q70CQ4 1352 aa19.59■□□□□ 0.73
TSPAN4-211ENST00000468468 INTS3Q68E01 1043 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-211ENST00000468468 RRAGDQ9NQL2 400 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-211ENST00000468468 GBP4Q96PP9 640 aa19.58■□□□□ 0.73
TSPAN4-211ENST00000468468 TTC21AQ8NDW8 1320 aa19.58■□□□□ 0.73
TSPAN4-211ENST00000468468 PEAK1Q9H792 1746 aa19.58■□□□□ 0.73
TSPAN4-211ENST00000468468 KRT24Q2M2I5 525 aa19.58■□□□□ 0.72
TSPAN4-211ENST00000468468 MAP3K19Q56UN5 1328 aa19.57■□□□□ 0.72
TSPAN4-211ENST00000468468 MRE11P49959 708 aa19.57■□□□□ 0.72
TSPAN4-211ENST00000468468 NALCNQ8IZF0 1738 aa19.57■□□□□ 0.72
TSPAN4-211ENST00000468468 NUTM2GQ5VZR2 741 aa19.56■□□□□ 0.72
TSPAN4-211ENST00000468468 HAP1P54257 671 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-211ENST00000468468 MCM10Q7L590 875 aa19.55■□□□□ 0.72
TSPAN4-211ENST00000468468 C16orf71Q8IYS4 520 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-211ENST00000468468 ANKRD44Q8N8A2 993 aa19.55■□□□□ 0.72
TSPAN4-211ENST00000468468 CHL1O00533 1208 aa19.55■□□□□ 0.72
TSPAN4-211ENST00000468468 TTC22Q5TAA0 569 aa19.55■□□□□ 0.72
TSPAN4-211ENST00000468468 GLIPR1L2Q4G1C9 344 aa19.54■□□□□ 0.72
TSPAN4-211ENST00000468468 ADAMTSL3P82987 1691 aa19.54■□□□□ 0.72
TSPAN4-211ENST00000468468 NLRP6P59044 892 aa19.54■□□□□ 0.72
TSPAN4-211ENST00000468468 GAS2L2Q8NHY3 880 aa19.54■□□□□ 0.72
TSPAN4-211ENST00000468468 RPAP2Q8IXW5 612 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-211ENST00000468468 GRPEL1Q9HAV7 217 aa19.53■□□□□ 0.72
TSPAN4-211ENST00000468468 ANKARQ7Z5J8 1434 aa19.53■□□□□ 0.72
TSPAN4-211ENST00000468468 RGS12O14924 1447 aa19.52■□□□□ 0.72
TSPAN4-211ENST00000468468 PIK3C2AO00443 1686 aa19.52■□□□□ 0.72
TSPAN4-211ENST00000468468 ATP10DQ9P241 1426 aa19.52■□□□□ 0.72
TSPAN4-211ENST00000468468 CEP85Q6P2H3 762 aa19.52■□□□□ 0.72
TSPAN4-211ENST00000468468 FMN2Q9NZ56 1722 aa19.51■□□□□ 0.71
TSPAN4-211ENST00000468468 SKOR2Q2VWA4 1001 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-211ENST00000468468 ZNF142P52746 1687 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-211ENST00000468468 PTMSP20962 102 aa19.51■□□□□ 0.71
TSPAN4-211ENST00000468468 OTUD7AQ8TE49 926 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-211ENST00000468468 ISY1Q9ULR0 285 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-211ENST00000468468 KIAA0232Q92628 1395 aa19.51■□□□□ 0.71
TSPAN4-211ENST00000468468 AMPHP49418 695 aa19.5■□□□□ 0.71
TSPAN4-211ENST00000468468 MSH6P52701 1360 aa19.5■□□□□ 0.71
TSPAN4-211ENST00000468468 APBB1O00213 710 aa19.5■□□□□ 0.71
TSPAN4-211ENST00000468468 SSFA2P28290 1259 aa19.5■□□□□ 0.71
TSPAN4-211ENST00000468468 PTPRCP08575 1304 aa19.5■□□□□ 0.71
TSPAN4-211ENST00000468468 CHD2O14647 1828 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-211ENST00000468468 RABEP1Q15276 862 aa19.49■□□□□ 0.71
TSPAN4-211ENST00000468468 SMARCA5O60264 1052 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-211ENST00000468468 MEIS3Q99687 375 aa19.49■□□□□ 0.71
TSPAN4-211ENST00000468468 USP26Q9BXU7 913 aa19.49■□□□□ 0.71
TSPAN4-211ENST00000468468 SBNO1A3KN83 1393 aa19.49■□□□□ 0.71
TSPAN4-211ENST00000468468 RTL1A6NKG5 1358 aa19.49■□□□□ 0.71
TSPAN4-211ENST00000468468 FLT4P35916 1363 aa19.49■□□□□ 0.71
TSPAN4-211ENST00000468468 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
TSPAN4-211ENST00000468468 C14orf37Q86TY3 774 aa19.48■□□□□ 0.71
TSPAN4-211ENST00000468468 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
TSPAN4-211ENST00000468468 PHF8Q9UPP1 1060 aa19.48■□□□□ 0.71
TSPAN4-211ENST00000468468 RGPD1P0DJD0 1748 aa19.47■□□□□ 0.71
TSPAN4-211ENST00000468468 SDSP20132 328 aa19.47■□□□□ 0.71
TSPAN4-211ENST00000468468 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
TSPAN4-211ENST00000468468 GAS2L3Q86XJ1 694 aa19.46■□□□□ 0.71
TSPAN4-211ENST00000468468 PODXL2Q9NZ53 605 aa19.46■□□□□ 0.71
TSPAN4-211ENST00000468468 GOLGA6L22H0YM25 854 aa19.45■□□□□ 0.7
TSPAN4-211ENST00000468468 FOXO3O43524 673 aa19.45■□□□□ 0.7
TSPAN4-211ENST00000468468 CASC1Q6TDU7 716 aa19.45■□□□□ 0.7
TSPAN4-211ENST00000468468 EYA1Q99502 592 aa19.45■□□□□ 0.7
TSPAN4-211ENST00000468468 SETD1BQ9UPS6 1966 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-211ENST00000468468 CRB1P82279 1406 aa19.45■□□□□ 0.7
TSPAN4-211ENST00000468468 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
TSPAN4-211ENST00000468468 NPHP4O75161 1426 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms