RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.19
PITRM1-209ENST00000464395 SLC26A8Q96RN1 970 aa13.83□□□□□ -0.2
PITRM1-209ENST00000464395 C22orf23Q9BZE7 217 aa13.83□□□□□ -0.2
PITRM1-209ENST00000464395 C1orf115Q9H7X2 142 aa13.83□□□□□ -0.2
PITRM1-209ENST00000464395 ELL2O00472 640 aaPredicted RBP13.83□□□□□ -0.2
PITRM1-209ENST00000464395 IGSF1Q8N6C5 1336 aa13.82□□□□□ -0.2
PITRM1-209ENST00000464395 LNPKQ9C0E8 428 aa13.82□□□□□ -0.2
PITRM1-209ENST00000464395 MED1Q15648 1581 aaPredicted RBP13.81□□□□□ -0.2
PITRM1-209ENST00000464395 FLT4P35916 1363 aa13.81□□□□□ -0.2
PITRM1-209ENST00000464395 BECN1Q14457 450 aa13.81□□□□□ -0.2
PITRM1-209ENST00000464395 ANO8Q9HCE9 1232 aaPredicted RBP13.81□□□□□ -0.2
PITRM1-209ENST00000464395 MCM10Q7L590 875 aa13.81□□□□□ -0.2
PITRM1-209ENST00000464395 API5Q9BZZ5 524 aaKnown RBP13.81□□□□□ -0.2
PITRM1-209ENST00000464395 NFAT5O94916 1531 aa13.8□□□□□ -0.2
PITRM1-209ENST00000464395 DCTPP1Q9H773 170 aa13.8□□□□□ -0.2
PITRM1-209ENST00000464395 DAXXQ9UER7 740 aaPredicted RBP13.8□□□□□ -0.2
PITRM1-209ENST00000464395 RGPD2P0DJD1 1756 aa13.8□□□□□ -0.2
PITRM1-209ENST00000464395 KDM3BQ7LBC6 1761 aa13.8□□□□□ -0.2
PITRM1-209ENST00000464395 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
PITRM1-209ENST00000464395 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
PITRM1-209ENST00000464395 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
PITRM1-209ENST00000464395 FOXO3O43524 673 aa13.78□□□□□ -0.2
PITRM1-209ENST00000464395 NUTM2FA1L443 756 aa13.78□□□□□ -0.2
PITRM1-209ENST00000464395 GSPT1P15170 499 aaKnown RBP13.78□□□□□ -0.2
PITRM1-209ENST00000464395 MFAP1P55081 439 aaKnown RBP13.78□□□□□ -0.2
PITRM1-209ENST00000464395 SNX21Q969T3 373 aa13.78□□□□□ -0.2
PITRM1-209ENST00000464395 UPF2Q9HAU5 1272 aaKnown RBP13.78□□□□□ -0.2
PITRM1-209ENST00000464395 MSH6P52701 1360 aa13.77□□□□□ -0.2
PITRM1-209ENST00000464395 ANKRD44Q8N8A2 993 aa13.77□□□□□ -0.21
PITRM1-209ENST00000464395 EYA1Q99502 592 aa13.77□□□□□ -0.21
PITRM1-209ENST00000464395 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
PITRM1-209ENST00000464395 LMO7Q8WWI1 1683 aa13.76□□□□□ -0.21
PITRM1-209ENST00000464395 CAMTA1Q9Y6Y1 1673 aa13.76□□□□□ -0.21
PITRM1-209ENST00000464395 PTPRCP08575 1304 aa13.76□□□□□ -0.21
PITRM1-209ENST00000464395 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
PITRM1-209ENST00000464395 EID1Q9Y6B2 187 aa13.76□□□□□ -0.21
PITRM1-209ENST00000464395 CEP85Q6P2H3 762 aa13.75□□□□□ -0.21
PITRM1-209ENST00000464395 TBC1D9Q6ZT07 1266 aa13.75□□□□□ -0.21
PITRM1-209ENST00000464395 SLKQ9H2G2 1235 aaPredicted RBP13.75□□□□□ -0.21
PITRM1-209ENST00000464395 ADAMTSL3P82987 1691 aa13.74□□□□□ -0.21
PITRM1-209ENST00000464395 KCNA6P17658 529 aa13.73□□□□□ -0.21
PITRM1-209ENST00000464395 SIPA1L3O60292 1781 aaPredicted RBP13.73□□□□□ -0.21
PITRM1-209ENST00000464395 G2E3Q7L622 706 aa13.73□□□□□ -0.21
PITRM1-209ENST00000464395 THEMISQ8N1K5 641 aaPredicted RBP13.73□□□□□ -0.21
PITRM1-209ENST00000464395 TRPM3Q9HCF6 1732 aaPredicted RBP13.73□□□□□ -0.21
PITRM1-209ENST00000464395 CD2BP2O95400 341 aaKnown RBP13.73□□□□□ -0.21
PITRM1-209ENST00000464395 ADAMTS7Q9UKP4 1686 aa13.73□□□□□ -0.21
PITRM1-209ENST00000464395 NCAPD2Q15021 1401 aa13.72□□□□□ -0.21
PITRM1-209ENST00000464395 HTATSF1O43719 755 aaKnown RBP13.72□□□□□ -0.21
PITRM1-209ENST00000464395 HOXC9P31274 260 aa13.72□□□□□ -0.21
PITRM1-209ENST00000464395 IL27Q8NEV9 243 aa13.72□□□□□ -0.21
PITRM1-209ENST00000464395 MIS18AQ9NYP9 233 aa13.72□□□□□ -0.21
PITRM1-209ENST00000464395 RPAP2Q8IXW5 612 aaPredicted RBP13.71□□□□□ -0.21
PITRM1-209ENST00000464395 MEIS3Q99687 375 aa13.71□□□□□ -0.21
PITRM1-209ENST00000464395 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
PITRM1-209ENST00000464395 SALL3Q9BXA9 1300 aa13.71□□□□□ -0.21
PITRM1-209ENST00000464395 PXDNLA1KZ92 1463 aa13.7□□□□□ -0.22
PITRM1-209ENST00000464395 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
PITRM1-209ENST00000464395 OTUD7AQ8TE49 926 aaPredicted RBP13.7□□□□□ -0.22
PITRM1-209ENST00000464395 SLIT3O75094 1523 aa13.7□□□□□ -0.22
PITRM1-209ENST00000464395 CEMIPQ8WUJ3 1361 aa13.69□□□□□ -0.22
PITRM1-209ENST00000464395 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
PITRM1-209ENST00000464395 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
PITRM1-209ENST00000464395 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
PITRM1-209ENST00000464395 HAP1P54257 671 aaPredicted RBP13.69□□□□□ -0.22
PITRM1-209ENST00000464395 CHMP5Q9NZZ3 219 aa13.68□□□□□ -0.22
PITRM1-209ENST00000464395 MCM4P33991 863 aa13.68□□□□□ -0.22
PITRM1-209ENST00000464395 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
PITRM1-209ENST00000464395 BRPF3Q9ULD4 1205 aa13.68□□□□□ -0.22
PITRM1-209ENST00000464395 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
PITRM1-209ENST00000464395 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
PITRM1-209ENST00000464395 MAP3K5Q99683 1374 aa13.67□□□□□ -0.22
PITRM1-209ENST00000464395 CDC45O75419 566 aa13.67□□□□□ -0.22
PITRM1-209ENST00000464395 BABAM1Q9NWV8 329 aa13.67□□□□□ -0.22
PITRM1-209ENST00000464395 SOS1Q07889 1333 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-209ENST00000464395 FSD2A1L4K1 749 aa13.66□□□□□ -0.22
PITRM1-209ENST00000464395 SOX12O15370 315 aa13.66□□□□□ -0.22
PITRM1-209ENST00000464395 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
PITRM1-209ENST00000464395 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
PITRM1-209ENST00000464395 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
PITRM1-209ENST00000464395 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
PITRM1-209ENST00000464395 RGPD5Q99666 1765 aa13.65□□□□□ -0.22
PITRM1-209ENST00000464395 NLRP6P59044 892 aa13.65□□□□□ -0.22
PITRM1-209ENST00000464395 USP26Q9BXU7 913 aa13.65□□□□□ -0.22
PITRM1-209ENST00000464395 AK9Q5TCS8 1911 aa13.65□□□□□ -0.22
PITRM1-209ENST00000464395 F6X3S4 739 aa13.65□□□□□ -0.22
PITRM1-209ENST00000464395 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
PITRM1-209ENST00000464395 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
PITRM1-209ENST00000464395 AMPHP49418 695 aa13.64□□□□□ -0.23
PITRM1-209ENST00000464395 MST1RQ04912 1400 aa13.64□□□□□ -0.23
PITRM1-209ENST00000464395 SMARCA5O60264 1052 aaPredicted RBP13.64□□□□□ -0.23
PITRM1-209ENST00000464395 ALS2Q96Q42 1657 aa13.64□□□□□ -0.23
PITRM1-209ENST00000464395 SDSP20132 328 aa13.64□□□□□ -0.23
PITRM1-209ENST00000464395 CCT4P50991 539 aaKnown RBP13.64□□□□□ -0.23
PITRM1-209ENST00000464395 RAB3GAP1Q15042 981 aa13.64□□□□□ -0.23
PITRM1-209ENST00000464395 HSCBQ8IWL3 235 aa13.64□□□□□ -0.23
PITRM1-209ENST00000464395 SETD1BQ9UPS6 1966 aaKnown RBP13.63□□□□□ -0.23
PITRM1-209ENST00000464395 CLEC17AQ6ZS10 378 aa13.63□□□□□ -0.23
PITRM1-209ENST00000464395 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
PITRM1-209ENST00000464395 IP6K1Q92551 441 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms