RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 KIF24Q5T7B8 1368 aa12.32□□□□□ -0.44
THBS3-203ENST00000457183 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
THBS3-203ENST00000457183 PXDNQ92626 1479 aa12.32□□□□□ -0.44
THBS3-203ENST00000457183 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
THBS3-203ENST00000457183 NLRP6P59044 892 aa12.31□□□□□ -0.44
THBS3-203ENST00000457183 NAP1L5Q96NT1 182 aaPredicted RBP12.31□□□□□ -0.44
THBS3-203ENST00000457183 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
THBS3-203ENST00000457183 MVPQ14764 893 aaKnown RBP12.3□□□□□ -0.44
THBS3-203ENST00000457183 SLIT3O75094 1523 aa12.3□□□□□ -0.44
THBS3-203ENST00000457183 PHRF1Q9P1Y6 1649 aaKnown RBP12.3□□□□□ -0.44
THBS3-203ENST00000457183 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
THBS3-203ENST00000457183 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
THBS3-203ENST00000457183 CHMP5Q9NZZ3 219 aa12.3□□□□□ -0.44
THBS3-203ENST00000457183 TRAK2O60296 914 aa12.29□□□□□ -0.44
THBS3-203ENST00000457183 DIAPH1O60610 1272 aaKnown RBP12.29□□□□□ -0.44
THBS3-203ENST00000457183 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
THBS3-203ENST00000457183 RGS17Q9UGC6 210 aaPredicted RBP12.29□□□□□ -0.44
THBS3-203ENST00000457183 CCDC27Q2M243 656 aa12.29□□□□□ -0.44
THBS3-203ENST00000457183 KCNH5Q8NCM2 988 aa12.29□□□□□ -0.44
THBS3-203ENST00000457183 PNNQ9H307 717 aaKnown RBP12.28□□□□□ -0.44
THBS3-203ENST00000457183 PEAK1Q9H792 1746 aa12.28□□□□□ -0.44
THBS3-203ENST00000457183 NFAT5O94916 1531 aa12.28□□□□□ -0.44
THBS3-203ENST00000457183 KCNA4P22459 653 aa12.28□□□□□ -0.44
THBS3-203ENST00000457183 FTSJ3Q8IY81 847 aaKnown RBP12.28□□□□□ -0.44
THBS3-203ENST00000457183 C8orf37Q96NL8 207 aa12.28□□□□□ -0.44
THBS3-203ENST00000457183 EMILIN1Q9Y6C2 1016 aa12.28□□□□□ -0.44
THBS3-203ENST00000457183 LTN1O94822 1766 aa12.27□□□□□ -0.44
THBS3-203ENST00000457183 CLCN1P35523 988 aa12.27□□□□□ -0.44
THBS3-203ENST00000457183 ZKSCAN2Q63HK3 967 aa12.27□□□□□ -0.44
THBS3-203ENST00000457183 MYH16Q9H6N6 1097 aa12.27□□□□□ -0.44
THBS3-203ENST00000457183 TNS3Q68CZ2 1445 aa12.27□□□□□ -0.45
THBS3-203ENST00000457183 RTL1A6NKG5 1358 aa12.27□□□□□ -0.45
THBS3-203ENST00000457183 SPATA31A3Q5VYP0 1347 aa12.27□□□□□ -0.45
THBS3-203ENST00000457183 DZIP1LQ8IYY4 767 aaKnown RBP12.27□□□□□ -0.45
THBS3-203ENST00000457183 ARHGEF10O15013 1369 aa12.27□□□□□ -0.45
THBS3-203ENST00000457183 FLT4P35916 1363 aa12.27□□□□□ -0.45
THBS3-203ENST00000457183 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
THBS3-203ENST00000457183 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
THBS3-203ENST00000457183 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
THBS3-203ENST00000457183 VSIG10Q8N0Z9 540 aa12.26□□□□□ -0.45
THBS3-203ENST00000457183 MRE11P49959 708 aa12.26□□□□□ -0.45
THBS3-203ENST00000457183 GLIPR1L2Q4G1C9 344 aa12.26□□□□□ -0.45
THBS3-203ENST00000457183 COL22A1Q8NFW1 1626 aaPredicted RBP12.26□□□□□ -0.45
THBS3-203ENST00000457183 POTEAQ6S8J7 498 aa12.25□□□□□ -0.45
THBS3-203ENST00000457183 AFF2P51816 1311 aa12.25□□□□□ -0.45
THBS3-203ENST00000457183 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
THBS3-203ENST00000457183 FBLN1P23142 703 aa12.25□□□□□ -0.45
THBS3-203ENST00000457183 IL13P35225 146 aa12.25□□□□□ -0.45
THBS3-203ENST00000457183 ZNF772Q68DY9 489 aaPredicted RBP12.25□□□□□ -0.45
THBS3-203ENST00000457183 NGLY1Q96IV0 654 aa12.25□□□□□ -0.45
THBS3-203ENST00000457183 CRYBG1Q9Y4K1 1723 aa12.25□□□□□ -0.45
THBS3-203ENST00000457183 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
THBS3-203ENST00000457183 RGPD1P0DJD0 1748 aa12.24□□□□□ -0.45
THBS3-203ENST00000457183 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
THBS3-203ENST00000457183 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
THBS3-203ENST00000457183 HDAC1Q13547 482 aaPredicted RBP12.24□□□□□ -0.45
THBS3-203ENST00000457183 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
THBS3-203ENST00000457183 FCHSD2O94868 740 aa12.24□□□□□ -0.45
THBS3-203ENST00000457183 TRIM27P14373 513 aa12.24□□□□□ -0.45
THBS3-203ENST00000457183 HSP90AA2PQ14568 343 aaPredicted RBP12.24□□□□□ -0.45
THBS3-203ENST00000457183 NUTM2GQ5VZR2 741 aa12.24□□□□□ -0.45
THBS3-203ENST00000457183 TSR2Q969E8 191 aaKnown RBP12.24□□□□□ -0.45
THBS3-203ENST00000457183 GRPEL1Q9HAV7 217 aa12.24□□□□□ -0.45
THBS3-203ENST00000457183 DDX11L8A8MPP1 907 aa12.23□□□□□ -0.45
THBS3-203ENST00000457183 ZMYND15Q9H091 742 aa12.23□□□□□ -0.45
THBS3-203ENST00000457183 ABCC6O95255 1503 aa12.23□□□□□ -0.45
THBS3-203ENST00000457183 HSP90AA1P07900 732 aaKnown RBP12.23□□□□□ -0.45
THBS3-203ENST00000457183 CABLES1Q8TDN4 633 aa12.23□□□□□ -0.45
THBS3-203ENST00000457183 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
THBS3-203ENST00000457183 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
THBS3-203ENST00000457183 GCP02774 474 aa12.22□□□□□ -0.45
THBS3-203ENST00000457183 AMPHP49418 695 aa12.22□□□□□ -0.45
THBS3-203ENST00000457183 ITPRIPQ8IWB1 547 aa12.22□□□□□ -0.45
THBS3-203ENST00000457183 ERBB4Q15303 1308 aa12.22□□□□□ -0.45
THBS3-203ENST00000457183 CT47B1P0C2W7 299 aaPredicted RBP12.22□□□□□ -0.45
THBS3-203ENST00000457183 DDIT3P35638 169 aa12.22□□□□□ -0.45
THBS3-203ENST00000457183 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
THBS3-203ENST00000457183 SOCS7O14512 581 aa12.21□□□□□ -0.45
THBS3-203ENST00000457183 SMC5Q8IY18 1101 aa12.21□□□□□ -0.45
THBS3-203ENST00000457183 HOXC9P31274 260 aa12.21□□□□□ -0.46
THBS3-203ENST00000457183 EXOSC9Q06265 439 aaKnown RBP12.21□□□□□ -0.46
THBS3-203ENST00000457183 EIF4A2Q14240 407 aaKnown RBP12.21□□□□□ -0.46
THBS3-203ENST00000457183 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.46
THBS3-203ENST00000457183 SSH1Q8WYL5 1049 aa12.2□□□□□ -0.46
THBS3-203ENST00000457183 IP6K1Q92551 441 aa12.2□□□□□ -0.46
THBS3-203ENST00000457183 SOX12O15370 315 aa12.2□□□□□ -0.46
THBS3-203ENST00000457183 RBM25P49756 843 aaKnown RBP12.2□□□□□ -0.46
THBS3-203ENST00000457183 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
THBS3-203ENST00000457183 ATF7IPQ6VMQ6 1270 aa12.2□□□□□ -0.46
THBS3-203ENST00000457183 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
THBS3-203ENST00000457183 ISY1Q9ULR0 285 aaKnown RBP12.2□□□□□ -0.46
THBS3-203ENST00000457183 USP21Q9UK80 565 aa12.19□□□□□ -0.46
THBS3-203ENST00000457183 ESPNB1AK53 854 aa12.19□□□□□ -0.46
THBS3-203ENST00000457183 TNPO1Q92973 898 aaKnown RBP12.19□□□□□ -0.46
THBS3-203ENST00000457183 ABCA3Q99758 1704 aa12.19□□□□□ -0.46
THBS3-203ENST00000457183 SNX21Q969T3 373 aa12.18□□□□□ -0.46
THBS3-203ENST00000457183 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
THBS3-203ENST00000457183 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
THBS3-203ENST00000457183 RXRBP28702 533 aa12.18□□□□□ -0.46
THBS3-203ENST00000457183 QTRT2Q9H974 415 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms