RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 KDRP35968 1356 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 NFAT5O94916 1531 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 STRCQ7RTU9 1775 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 MSH6P52701 1360 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 MST1RQ04912 1400 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 NUTM2GQ5VZR2 741 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 IGSF1Q8N6C5 1336 aa13.61□□□□□ -0.23
VIPAS39-203ENST00000448935 SLIT3O75094 1523 aa13.6□□□□□ -0.23
VIPAS39-203ENST00000448935 FOXO3O43524 673 aa13.6□□□□□ -0.23
VIPAS39-203ENST00000448935 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-203ENST00000448935 C20orf194Q5TEA3 1177 aa13.6□□□□□ -0.23
VIPAS39-203ENST00000448935 TSR2Q969E8 191 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-203ENST00000448935 KRT28Q7Z3Y7 464 aa13.59□□□□□ -0.23
VIPAS39-203ENST00000448935 IP6K1Q92551 441 aa13.59□□□□□ -0.23
VIPAS39-203ENST00000448935 ALDH1L2Q3SY69 923 aa13.58□□□□□ -0.24
VIPAS39-203ENST00000448935 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
VIPAS39-203ENST00000448935 NKX1-1Q15270 411 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-203ENST00000448935 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
VIPAS39-203ENST00000448935 FRAT1Q92837 279 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-203ENST00000448935 EYA1Q99502 592 aa13.57□□□□□ -0.24
VIPAS39-203ENST00000448935 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
VIPAS39-203ENST00000448935 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
VIPAS39-203ENST00000448935 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
VIPAS39-203ENST00000448935 LAS1LQ9Y4W2 734 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-203ENST00000448935 USP19O94966 1318 aa13.56□□□□□ -0.24
VIPAS39-203ENST00000448935 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
VIPAS39-203ENST00000448935 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
VIPAS39-203ENST00000448935 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-203ENST00000448935 HTATSF1O43719 755 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-203ENST00000448935 SMC4Q9NTJ3 1288 aa13.56□□□□□ -0.24
VIPAS39-203ENST00000448935 XIRP1Q702N8 1843 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-203ENST00000448935 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
VIPAS39-203ENST00000448935 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
VIPAS39-203ENST00000448935 GCP02774 474 aa13.54□□□□□ -0.24
VIPAS39-203ENST00000448935 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-203ENST00000448935 GTPBP6O43824 516 aaPredicted RBP13.53□□□□□ -0.24
VIPAS39-203ENST00000448935 BRPF1P55201 1214 aaPredicted RBP13.53□□□□□ -0.24
VIPAS39-203ENST00000448935 LMOD2Q6P5Q4 547 aa13.53□□□□□ -0.24
VIPAS39-203ENST00000448935 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
VIPAS39-203ENST00000448935 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
VIPAS39-203ENST00000448935 FTSJ3Q8IY81 847 aaKnown RBP13.53□□□□□ -0.24
VIPAS39-203ENST00000448935 THUMPD2Q9BTF0 503 aaKnown RBP13.53□□□□□ -0.24
VIPAS39-203ENST00000448935 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
VIPAS39-203ENST00000448935 NUBP1P53384 320 aa13.52□□□□□ -0.25
VIPAS39-203ENST00000448935 XPCQ01831 940 aaPredicted RBP13.52□□□□□ -0.25
VIPAS39-203ENST00000448935 SSH1Q8WYL5 1049 aa13.52□□□□□ -0.25
VIPAS39-203ENST00000448935 BCL2L13Q9BXK5 485 aa13.52□□□□□ -0.25
VIPAS39-203ENST00000448935 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
VIPAS39-203ENST00000448935 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
VIPAS39-203ENST00000448935 CLUAP1Q96AJ1 413 aa13.51□□□□□ -0.25
VIPAS39-203ENST00000448935 LTV1Q96GA3 475 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-203ENST00000448935 COG6Q9Y2V7 657 aa13.51□□□□□ -0.25
VIPAS39-203ENST00000448935 TNS3Q68CZ2 1445 aa13.51□□□□□ -0.25
VIPAS39-203ENST00000448935 FAM83GA6ND36 823 aa13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 VAMP4O75379 141 aa13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 ATF7IPQ6VMQ6 1270 aa13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 PANK1Q8TE04 598 aa13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 ABCC6O95255 1503 aa13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 KIAA0232Q92628 1395 aa13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 CHL1O00533 1208 aa13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 TCERG1O14776 1098 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
VIPAS39-203ENST00000448935 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
VIPAS39-203ENST00000448935 LRRC37A3O60309 1634 aa13.49□□□□□ -0.25
VIPAS39-203ENST00000448935 DCTN1Q14203 1278 aa13.49□□□□□ -0.25
VIPAS39-203ENST00000448935 MVPQ14764 893 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-203ENST00000448935 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
VIPAS39-203ENST00000448935 ILDR2Q71H61 639 aa13.49□□□□□ -0.25
VIPAS39-203ENST00000448935 CHMP4BQ9H444 224 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-203ENST00000448935 CRB1P82279 1406 aa13.49□□□□□ -0.25
VIPAS39-203ENST00000448935 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
VIPAS39-203ENST00000448935 PXDNQ92626 1479 aa13.48□□□□□ -0.25
VIPAS39-203ENST00000448935 MAP3K5Q99683 1374 aa13.48□□□□□ -0.25
VIPAS39-203ENST00000448935 ZBTB7CA1YPR0 619 aa13.48□□□□□ -0.25
VIPAS39-203ENST00000448935 STK25O00506 426 aa13.48□□□□□ -0.25
VIPAS39-203ENST00000448935 MCM10Q7L590 875 aa13.48□□□□□ -0.25
VIPAS39-203ENST00000448935 BABAM1Q9NWV8 329 aa13.48□□□□□ -0.25
VIPAS39-203ENST00000448935 NOB1Q9ULX3 412 aaKnown RBP13.48□□□□□ -0.25
VIPAS39-203ENST00000448935 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
VIPAS39-203ENST00000448935 NCAPD2Q15021 1401 aa13.48□□□□□ -0.25
VIPAS39-203ENST00000448935 MED1Q15648 1581 aaPredicted RBP13.47□□□□□ -0.25
VIPAS39-203ENST00000448935 ZNF335Q9H4Z2 1342 aaPredicted RBP13.47□□□□□ -0.25
VIPAS39-203ENST00000448935 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
VIPAS39-203ENST00000448935 TRIM27P14373 513 aa13.46□□□□□ -0.25
VIPAS39-203ENST00000448935 AMOTQ4VCS5 1084 aa13.46□□□□□ -0.25
VIPAS39-203ENST00000448935 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.25
VIPAS39-203ENST00000448935 RGPD2P0DJD1 1756 aa13.46□□□□□ -0.25
VIPAS39-203ENST00000448935 SOCS7O14512 581 aa13.46□□□□□ -0.26
VIPAS39-203ENST00000448935 RLBP1P12271 317 aa13.46□□□□□ -0.26
VIPAS39-203ENST00000448935 NBPF6Q5VWK0 638 aa13.46□□□□□ -0.26
VIPAS39-203ENST00000448935 MRPL50Q8N5N7 158 aaKnown RBP13.46□□□□□ -0.26
VIPAS39-203ENST00000448935 ANKRD24Q8TF21 1146 aa13.46□□□□□ -0.26
VIPAS39-203ENST00000448935 NBPF4Q96M43 638 aa13.46□□□□□ -0.26
VIPAS39-203ENST00000448935 RBM19Q9Y4C8 960 aaKnown RBP13.46□□□□□ -0.26
VIPAS39-203ENST00000448935 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
VIPAS39-203ENST00000448935 CRYBG1Q9Y4K1 1723 aa13.45□□□□□ -0.26
VIPAS39-203ENST00000448935 PLEKHO1Q53GL0 409 aaPredicted RBP13.45□□□□□ -0.26
VIPAS39-203ENST00000448935 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms