RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MAP4K4O95819 1239 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-205ENST00000438362 RBM25P49756 843 aaKnown RBP8.02□□□□□ -1.13
CSDE1-205ENST00000438362 RIC3Q7Z5B4 369 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 ERC1Q8IUD2 1116 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 A0A1W2PP64 1363 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 CDK11BP21127 795 aaKnown RBP8.02□□□□□ -1.13
CSDE1-205ENST00000438362 AEBP1Q8IUX7 1158 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 TTC5Q8N0Z6 440 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 ANKRD44Q8N8A2 993 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 ZNF592Q92610 1267 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 KDM5DQ9BY66 1539 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 MPNDQ8N594 471 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 TSPYL6Q8N831 410 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 C8orf58Q8NAV2 365 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 ABCA8O94911 1581 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 PLA2R1Q13018 1463 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 SDSP20132 328 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 LRRFIP1Q32MZ4 808 aaKnown RBP8.01□□□□□ -1.13
CSDE1-205ENST00000438362 CCDC73Q6ZRK6 1079 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 CCDC34Q96HJ3 373 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 TRIM35Q9UPQ4 493 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 ZNF518AQ6AHZ1 1483 aa8.01□□□□□ -1.13
CSDE1-205ENST00000438362 CCDC192P0DO97 292 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 TRHP20396 242 aaPredicted RBP8□□□□□ -1.13
CSDE1-205ENST00000438362 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 SLC26A8Q96RN1 970 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 SBNO2Q9Y2G9 1366 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 PRDM15P57071 1507 aaPredicted RBP8□□□□□ -1.13
CSDE1-205ENST00000438362 UQCRHLA0A096LP55 91 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 GNAT3A8MTJ3 354 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 ZBTB7BO15156 539 aaPredicted RBP8□□□□□ -1.13
CSDE1-205ENST00000438362 UQCRHP07919 91 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 PLEKHO1Q53GL0 409 aaPredicted RBP8□□□□□ -1.13
CSDE1-205ENST00000438362 CWC27Q6UX04 472 aaKnown RBP8□□□□□ -1.13
CSDE1-205ENST00000438362 PHACTR3Q96KR7 559 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 MEIS3Q99687 375 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 TRIM5Q9C035 493 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 DCTPP1Q9H773 170 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 ZMYM3Q14202 1370 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 KRT85P78386 507 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 KIF1BPQ96EK5 621 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 RAB11FIP3O75154 756 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 CPLX2Q6PUV4 134 aaKnown RBP8□□□□□ -1.13
CSDE1-205ENST00000438362 ASXL2Q76L83 1435 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 SAMD9LQ8IVG5 1584 aa8□□□□□ -1.13
CSDE1-205ENST00000438362 ZSCAN31Q96LW9 406 aaPredicted RBP8□□□□□ -1.13
CSDE1-205ENST00000438362 CPLX1O14810 134 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 LARP1BQ659C4 914 aaKnown RBP7.99□□□□□ -1.13
CSDE1-205ENST00000438362 RAPGEF4Q8WZA2 1011 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 JAKMIP1Q96N16 626 aaKnown RBP7.99□□□□□ -1.13
CSDE1-205ENST00000438362 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-205ENST00000438362 FLIIQ13045 1269 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 ZSCAN23Q3MJ62 389 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 C16orf71Q8IYS4 520 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-205ENST00000438362 PDRG1Q9NUG6 133 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 GLRX3O76003 335 aaKnown RBP7.99□□□□□ -1.13
CSDE1-205ENST00000438362 FOSBP53539 338 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 ANKRD1Q15327 319 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 ZNF530Q6P9A1 599 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-205ENST00000438362 PLEKHM2Q8IWE5 1019 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 SPC24Q8NBT2 197 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 RRAGDQ9NQL2 400 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-205ENST00000438362 LRRFIP2Q9Y608 721 aaKnown RBP7.99□□□□□ -1.13
CSDE1-205ENST00000438362 ATP10AO60312 1499 aa7.99□□□□□ -1.13
CSDE1-205ENST00000438362 XPCQ01831 940 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-205ENST00000438362 RBM27Q9P2N5 1060 aaKnown RBP7.98□□□□□ -1.13
CSDE1-205ENST00000438362 SYNMO15061 1565 aa7.98□□□□□ -1.13
CSDE1-205ENST00000438362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.98□□□□□ -1.13
CSDE1-205ENST00000438362 ZFYVE9O95405 1425 aa7.98□□□□□ -1.13
CSDE1-205ENST00000438362 PDE1AP54750 535 aa7.98□□□□□ -1.13
CSDE1-205ENST00000438362 BLOC1S2Q6QNY1 142 aa7.98□□□□□ -1.13
CSDE1-205ENST00000438362 TMX3Q96JJ7 454 aa7.98□□□□□ -1.13
CSDE1-205ENST00000438362 NEUROD6Q96NK8 337 aa7.98□□□□□ -1.13
CSDE1-205ENST00000438362 KDM5AP29375 1690 aaKnown RBP7.98□□□□□ -1.13
CSDE1-205ENST00000438362 CASTP20810 708 aaKnown RBP7.98□□□□□ -1.13
CSDE1-205ENST00000438362 TAF7Q15545 349 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-205ENST00000438362 ATP7AQ04656 1500 aa7.98□□□□□ -1.13
CSDE1-205ENST00000438362 TTC21BQ7Z4L5 1316 aa7.98□□□□□ -1.13
CSDE1-205ENST00000438362 ERVK-7P63135 1459 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 PDIA4P13667 645 aaKnown RBP7.97□□□□□ -1.13
CSDE1-205ENST00000438362 CCDC183Q5T5S1 534 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 TSHZ3Q63HK5 1081 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 AACSQ86V21 672 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 SDF4Q9BRK5 362 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 TOMM22Q9NS69 142 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 MCM5P33992 734 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 TNMDQ9H2S6 317 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 GDPD2Q9HCC8 539 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 CEP85Q6P2H3 762 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 LIMCH1Q9UPQ0 1083 aa7.97□□□□□ -1.13
CSDE1-205ENST00000438362 KINO60870 393 aaKnown RBP7.96□□□□□ -1.13
CSDE1-205ENST00000438362 LRSAM1Q6UWE0 723 aa7.96□□□□□ -1.13
CSDE1-205ENST00000438362 CCDC83Q8IWF9 413 aa7.96□□□□□ -1.13
CSDE1-205ENST00000438362 STK3Q13188 491 aa7.96□□□□□ -1.13
CSDE1-205ENST00000438362 HSP90AB2PQ58FF8 381 aa7.96□□□□□ -1.13
CSDE1-205ENST00000438362 FBXW7Q969H0 707 aa7.96□□□□□ -1.13
CSDE1-205ENST00000438362 NAT10Q9H0A0 1025 aaKnown RBP7.96□□□□□ -1.13
CSDE1-205ENST00000438362 SIL1Q9H173 461 aa7.96□□□□□ -1.13
CSDE1-205ENST00000438362 NUP62CLQ9H1M0 184 aa7.96□□□□□ -1.13
CSDE1-205ENST00000438362 NLRP2Q9NX02 1062 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms