RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 TAF7Q15545 349 aaPredicted RBP23.45■■□□□ 1.34
HCG18-235ENST00000426882 RRP12Q5JTH9 1297 aaKnown RBP23.45■■□□□ 1.34
HCG18-235ENST00000426882 MNS1Q8NEH6 495 aa23.44■■□□□ 1.34
HCG18-235ENST00000426882 ZSCAN31Q96LW9 406 aaPredicted RBP23.44■■□□□ 1.34
HCG18-235ENST00000426882 MPNDQ8N594 471 aa23.44■■□□□ 1.34
HCG18-235ENST00000426882 KCNH5Q8NCM2 988 aa23.44■■□□□ 1.34
HCG18-235ENST00000426882 TCOF1Q13428 1488 aaKnown RBP23.44■■□□□ 1.34
HCG18-235ENST00000426882 BCL11BQ9C0K0 894 aaPredicted RBP23.43■■□□□ 1.34
HCG18-235ENST00000426882 POGZQ7Z3K3 1410 aa23.43■■□□□ 1.34
HCG18-235ENST00000426882 SPC24Q8NBT2 197 aa23.43■■□□□ 1.34
HCG18-235ENST00000426882 NCBP3Q53F19 620 aaKnown RBP23.43■■□□□ 1.34
HCG18-235ENST00000426882 ZNF771Q7L3S4 317 aaPredicted RBP23.43■■□□□ 1.34
HCG18-235ENST00000426882 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.43■■□□□ 1.34
HCG18-235ENST00000426882 TNMDQ9H2S6 317 aa23.43■■□□□ 1.34
HCG18-235ENST00000426882 CCDC57Q2TAC2 916 aa23.42■■□□□ 1.34
HCG18-235ENST00000426882 PDILTQ8N807 584 aa23.42■■□□□ 1.34
HCG18-235ENST00000426882 KDM5BQ9UGL1 1544 aa23.42■■□□□ 1.34
HCG18-235ENST00000426882 PRDM11Q9NQV5 511 aa23.42■■□□□ 1.34
HCG18-235ENST00000426882 GLRX3O76003 335 aaKnown RBP23.42■■□□□ 1.34
HCG18-235ENST00000426882 SMC2O95347 1197 aa23.42■■□□□ 1.34
HCG18-235ENST00000426882 USHBP1Q8N6Y0 703 aa23.42■■□□□ 1.34
HCG18-235ENST00000426882 MTMR7Q9Y216 660 aa23.41■■□□□ 1.34
HCG18-235ENST00000426882 FKBP4Q02790 459 aaKnown RBP eCLIP23.41■■□□□ 1.34
HCG18-235ENST00000426882 TESK2Q96S53 571 aa23.41■■□□□ 1.34
HCG18-235ENST00000426882 CEP126Q9P2H0 1117 aa23.41■■□□□ 1.34
HCG18-235ENST00000426882 IL16Q14005 1332 aa23.41■■□□□ 1.34
HCG18-235ENST00000426882 RAB11FIP3O75154 756 aa23.41■■□□□ 1.34
HCG18-235ENST00000426882 ANKRD36BQ8N2N9 1353 aa23.4■■□□□ 1.34
HCG18-235ENST00000426882 ESPNB1AK53 854 aa23.4■■□□□ 1.34
HCG18-235ENST00000426882 CASTP20810 708 aaKnown RBP23.4■■□□□ 1.34
HCG18-235ENST00000426882 ME1P48163 572 aa23.4■■□□□ 1.34
HCG18-235ENST00000426882 MBIPQ9NS73 344 aa23.4■■□□□ 1.34
HCG18-235ENST00000426882 NUP160Q12769 1436 aa23.4■■□□□ 1.34
HCG18-235ENST00000426882 ASXL1Q8IXJ9 1541 aa23.39■■□□□ 1.34
HCG18-235ENST00000426882 BMP2KLQ5H9B9 411 aa23.39■■□□□ 1.34
HCG18-235ENST00000426882 AMOTL2Q9Y2J4 779 aa23.39■■□□□ 1.33
HCG18-235ENST00000426882 FAM83GA6ND36 823 aa23.39■■□□□ 1.33
HCG18-235ENST00000426882 PLCH2O75038 1416 aa23.38■■□□□ 1.33
HCG18-235ENST00000426882 FBLN1P23142 703 aa23.38■■□□□ 1.33
HCG18-235ENST00000426882 KRT32Q14532 448 aa23.38■■□□□ 1.33
HCG18-235ENST00000426882 PPP6R1Q9UPN7 881 aa23.38■■□□□ 1.33
HCG18-235ENST00000426882 PCDHB15Q9Y5E8 787 aa23.38■■□□□ 1.33
HCG18-235ENST00000426882 LRRFIP2Q9Y608 721 aaKnown RBP23.38■■□□□ 1.33
HCG18-235ENST00000426882 DENND4BO75064 1496 aaPredicted RBP23.38■■□□□ 1.33
HCG18-235ENST00000426882 JMYQ8N9B5 988 aa23.38■■□□□ 1.33
HCG18-235ENST00000426882 SPATA32Q96LK8 384 aa23.37■■□□□ 1.33
HCG18-235ENST00000426882 ARGLU1Q9NWB6 273 aaPredicted RBP23.37■■□□□ 1.33
HCG18-235ENST00000426882 HMGN5P82970 282 aaKnown RBP23.37■■□□□ 1.33
HCG18-235ENST00000426882 TBC1D32Q96NH3 1257 aa23.37■■□□□ 1.33
HCG18-235ENST00000426882 PTPRCP08575 1304 aa23.37■■□□□ 1.33
HCG18-235ENST00000426882 FLIIQ13045 1269 aa23.36■■□□□ 1.33
HCG18-235ENST00000426882 TBC1D9Q6ZT07 1266 aa23.36■■□□□ 1.33
HCG18-235ENST00000426882 DUOX2Q9NRD8 1548 aa23.36■■□□□ 1.33
HCG18-235ENST00000426882 SYCP2Q9BX26 1530 aa23.36■■□□□ 1.33
HCG18-235ENST00000426882 MAP7D2Q96T17 732 aa23.36■■□□□ 1.33
HCG18-235ENST00000426882 SYCE3A1L190 88 aa23.35■■□□□ 1.33
HCG18-235ENST00000426882 ITSN2Q9NZM3 1697 aa23.35■■□□□ 1.33
HCG18-235ENST00000426882 SSFA2P28290 1259 aa23.35■■□□□ 1.33
HCG18-235ENST00000426882 PRPF40BQ6NWY9 871 aaKnown RBP23.35■■□□□ 1.33
HCG18-235ENST00000426882 MTERF4Q7Z6M4 381 aaKnown RBP23.35■■□□□ 1.33
HCG18-235ENST00000426882 TNPO1Q92973 898 aaKnown RBP23.34■■□□□ 1.33
HCG18-235ENST00000426882 DNAAF4Q8WXU2 420 aa23.34■■□□□ 1.33
HCG18-235ENST00000426882 LARP1Q6PKG0 1096 aaKnown RBP23.34■■□□□ 1.33
HCG18-235ENST00000426882 PHF8Q9UPP1 1060 aa23.34■■□□□ 1.33
HCG18-235ENST00000426882 CCDC83Q8IWF9 413 aa23.33■■□□□ 1.33
HCG18-235ENST00000426882 NACAP1Q9BZK3 213 aa23.33■■□□□ 1.33
HCG18-235ENST00000426882 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.33
HCG18-235ENST00000426882 FERMT3Q86UX7 667 aa23.33■■□□□ 1.33
HCG18-235ENST00000426882 NUP62CLQ9H1M0 184 aa23.33■■□□□ 1.33
HCG18-235ENST00000426882 CTNNA3Q9UI47 895 aa23.33■■□□□ 1.33
HCG18-235ENST00000426882 CTTNBP2Q8WZ74 1663 aa23.33■■□□□ 1.33
HCG18-235ENST00000426882 HDAC1Q13547 482 aaPredicted RBP23.33■■□□□ 1.33
HCG18-235ENST00000426882 TCEAL9Q9UHQ7 104 aa23.33■■□□□ 1.33
HCG18-235ENST00000426882 BOLA2Q9H3K6 86 aa23.33■■□□□ 1.32
HCG18-235ENST00000426882 TTC21BQ7Z4L5 1316 aa23.32■■□□□ 1.32
HCG18-235ENST00000426882 TEX35Q5T0J7 233 aa23.32■■□□□ 1.32
HCG18-235ENST00000426882 MPRIPQ6WCQ1 1025 aa23.32■■□□□ 1.32
HCG18-235ENST00000426882 TRIM22Q8IYM9 498 aa23.32■■□□□ 1.32
HCG18-235ENST00000426882 CCDC85AQ96PX6 553 aaPredicted RBP23.32■■□□□ 1.32
HCG18-235ENST00000426882 CFAP45Q9UL16 551 aa23.32■■□□□ 1.32
HCG18-235ENST00000426882 AMOTQ4VCS5 1084 aa23.32■■□□□ 1.32
HCG18-235ENST00000426882 MPHOSPH8Q99549 860 aa23.32■■□□□ 1.32
HCG18-235ENST00000426882 GNL3LQ9NVN8 582 aaKnown RBP23.32■■□□□ 1.32
HCG18-235ENST00000426882 ZSCAN25Q6NSZ9 544 aa23.32■■□□□ 1.32
HCG18-235ENST00000426882 STK11IPQ8N1F8 1099 aa23.31■■□□□ 1.32
HCG18-235ENST00000426882 DDX11Q96FC9 970 aa23.31■■□□□ 1.32
HCG18-235ENST00000426882 PDIA4P13667 645 aaKnown RBP23.31■■□□□ 1.32
HCG18-235ENST00000426882 MEX3CQ5U5Q3 659 aaKnown RBP23.31■■□□□ 1.32
HCG18-235ENST00000426882 SLC3A2P08195 630 aaKnown RBP23.3■■□□□ 1.32
HCG18-235ENST00000426882 CEBPAP49715 358 aaPredicted RBP23.3■■□□□ 1.32
HCG18-235ENST00000426882 ARHGAP45Q92619 1136 aa23.3■■□□□ 1.32
HCG18-235ENST00000426882 FOXO3O43524 673 aa23.29■■□□□ 1.32
HCG18-235ENST00000426882 CTDP1Q9Y5B0 961 aaPredicted RBP23.29■■□□□ 1.32
HCG18-235ENST00000426882 POLR3AO14802 1390 aaPredicted RBP23.29■■□□□ 1.32
HCG18-235ENST00000426882 PER1O15534 1290 aaPredicted RBP23.29■■□□□ 1.32
HCG18-235ENST00000426882 RBM10P98175 930 aaKnown RBP23.29■■□□□ 1.32
HCG18-235ENST00000426882 DBF4Q9UBU7 674 aaPredicted RBP23.29■■□□□ 1.32
HCG18-235ENST00000426882 ACEP12821 1306 aa23.29■■□□□ 1.32
HCG18-235ENST00000426882 WDR62O43379 1518 aa23.29■■□□□ 1.32
HCG18-235ENST00000426882 MYD88Q99836 296 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms