RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 RAB11FIP3O75154 756 aa10.82□□□□□ -0.68
PBRM1-208ENST00000410007 ZPR1O75312 459 aa10.82□□□□□ -0.68
PBRM1-208ENST00000410007 ATP2B1P20020 1258 aa10.82□□□□□ -0.68
PBRM1-208ENST00000410007 KRT32Q14532 448 aa10.82□□□□□ -0.68
PBRM1-208ENST00000410007 NGLY1Q96IV0 654 aa10.82□□□□□ -0.68
PBRM1-208ENST00000410007 IL1RAPL2Q9NP60 686 aa10.82□□□□□ -0.68
PBRM1-208ENST00000410007 LETM1O95202 739 aaPredicted RBP10.82□□□□□ -0.68
PBRM1-208ENST00000410007 AEBP1Q8IUX7 1158 aa10.82□□□□□ -0.68
PBRM1-208ENST00000410007 ACEP12821 1306 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 BLOC1S2Q6QNY1 142 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
PBRM1-208ENST00000410007 FMNL2Q96PY5 1086 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 DBF4Q9UBU7 674 aaPredicted RBP10.81□□□□□ -0.68
PBRM1-208ENST00000410007 WDR7Q9Y4E6 1490 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 SSH1Q8WYL5 1049 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 RAI14Q9P0K7 980 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 ANKRD36BQ8N2N9 1353 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 CCDC69A6NI79 296 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 ATP2B2Q01814 1243 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 STK38Q15208 465 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 METTL24Q5JXM2 366 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 MPRIPQ6WCQ1 1025 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 HYPKQ9NX55 129 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 LRP2BPQ9P2M1 347 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 RARSP54136 660 aaKnown RBP10.81□□□□□ -0.68
PBRM1-208ENST00000410007 IFNL2Q8IZJ0 200 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 CDK5RAP3Q96JB5 506 aa10.81□□□□□ -0.68
PBRM1-208ENST00000410007 TEX13AQ9BXU3 409 aaPredicted RBP10.81□□□□□ -0.68
PBRM1-208ENST00000410007 HOMER1Q86YM7 354 aa10.8□□□□□ -0.68
PBRM1-208ENST00000410007 NUP153P49790 1475 aaKnown RBP10.8□□□□□ -0.68
PBRM1-208ENST00000410007 TTC21AQ8NDW8 1320 aa10.8□□□□□ -0.68
PBRM1-208ENST00000410007 GLRX3O76003 335 aaKnown RBP10.8□□□□□ -0.68
PBRM1-208ENST00000410007 TDO2P48775 406 aa10.8□□□□□ -0.68
PBRM1-208ENST00000410007 RBM5P52756 815 aaKnown RBP eCLIP10.8□□□□□ -0.68
PBRM1-208ENST00000410007 CDKL5O76039 1030 aa10.8□□□□□ -0.68
PBRM1-208ENST00000410007 MSH6P52701 1360 aa10.8□□□□□ -0.68
PBRM1-208ENST00000410007 IFIT1P09914 478 aaKnown RBP10.8□□□□□ -0.68
PBRM1-208ENST00000410007 UNC13AQ9UPW8 1703 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 KDM4AO75164 1064 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 MAP4K4O95819 1239 aaPredicted RBP10.79□□□□□ -0.68
PBRM1-208ENST00000410007 DNAAF4Q8WXU2 420 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 MYD88Q99836 296 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 EXOC6BQ9Y2D4 811 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 ZSCAN31Q96LW9 406 aaPredicted RBP10.79□□□□□ -0.68
PBRM1-208ENST00000410007 CCDC85AQ96PX6 553 aaPredicted RBP10.79□□□□□ -0.68
PBRM1-208ENST00000410007 UGGT2Q9NYU1 1516 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 IDH1O75874 414 aaKnown RBP10.79□□□□□ -0.68
PBRM1-208ENST00000410007 EPS15P42566 896 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 SOGA3Q5TF21 947 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 UBAC1Q9BSL1 405 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 NFKBIBQ15653 356 aa10.79□□□□□ -0.68
PBRM1-208ENST00000410007 NKTRP30414 1462 aaKnown RBP10.78□□□□□ -0.68
PBRM1-208ENST00000410007 OFD1O75665 1012 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 ZNF592Q92610 1267 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 TMOD2Q9NZR1 351 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 WDR33Q9C0J8 1336 aaKnown RBP10.78□□□□□ -0.68
PBRM1-208ENST00000410007 PDIA4P13667 645 aaKnown RBP10.78□□□□□ -0.68
PBRM1-208ENST00000410007 PIP4K2AP48426 406 aaPredicted RBP10.78□□□□□ -0.68
PBRM1-208ENST00000410007 GPS2Q13227 327 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 CAVIN4Q5BKX8 364 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 CWC27Q6UX04 472 aaKnown RBP10.78□□□□□ -0.68
PBRM1-208ENST00000410007 ARID3AQ99856 593 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 IFIT5Q13325 482 aaKnown RBP10.78□□□□□ -0.68
PBRM1-208ENST00000410007 AIDAQ96BJ3 306 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 PTPRCP08575 1304 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 ITSN2Q9NZM3 1697 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 ABCC10Q5T3U5 1492 aa10.78□□□□□ -0.68
PBRM1-208ENST00000410007 K7ELQ4 463 aaPredicted RBP10.77□□□□□ -0.68
PBRM1-208ENST00000410007 ZSCAN29Q8IWY8 852 aaPredicted RBP10.77□□□□□ -0.68
PBRM1-208ENST00000410007 NPHP3Q7Z494 1330 aa10.77□□□□□ -0.68
PBRM1-208ENST00000410007 NUP160Q12769 1436 aa10.77□□□□□ -0.69
PBRM1-208ENST00000410007 FIBPO43427 364 aa10.77□□□□□ -0.69
PBRM1-208ENST00000410007 MX1P20591 662 aa10.77□□□□□ -0.69
PBRM1-208ENST00000410007 ANKRD24Q8TF21 1146 aa10.77□□□□□ -0.69
PBRM1-208ENST00000410007 NUP133Q8WUM0 1156 aa10.77□□□□□ -0.69
PBRM1-208ENST00000410007 ABCF2Q9UG63 623 aa10.77□□□□□ -0.69
PBRM1-208ENST00000410007 ZNF287Q9HBT7 754 aa10.77□□□□□ -0.69
PBRM1-208ENST00000410007 PDRG1Q9NUG6 133 aa10.77□□□□□ -0.69
PBRM1-208ENST00000410007 TRMT112Q9UI30 125 aaKnown RBP10.77□□□□□ -0.69
PBRM1-208ENST00000410007 SYCP2Q9BX26 1530 aa10.77□□□□□ -0.69
PBRM1-208ENST00000410007 STK3Q13188 491 aa10.76□□□□□ -0.69
PBRM1-208ENST00000410007 IMMTQ16891 758 aaKnown RBP10.76□□□□□ -0.69
PBRM1-208ENST00000410007 CT47A1Q5JQC4 288 aaPredicted RBP10.76□□□□□ -0.69
PBRM1-208ENST00000410007 JAKMIP1Q96N16 626 aaKnown RBP10.76□□□□□ -0.69
PBRM1-208ENST00000410007 NOL7Q9UMY1 257 aaKnown RBP10.76□□□□□ -0.69
PBRM1-208ENST00000410007 DISP3Q9P2K9 1392 aa10.76□□□□□ -0.69
PBRM1-208ENST00000410007 NUTM1Q86Y26 1132 aa10.76□□□□□ -0.69
PBRM1-208ENST00000410007 IL16Q14005 1332 aa10.76□□□□□ -0.69
PBRM1-208ENST00000410007 RIMS2Q9UQ26 1411 aa10.76□□□□□ -0.69
PBRM1-208ENST00000410007 TRAK2O60296 914 aa10.76□□□□□ -0.69
PBRM1-208ENST00000410007 KRT18P05783 430 aaKnown RBP10.76□□□□□ -0.69
PBRM1-208ENST00000410007 MRE11P49959 708 aa10.76□□□□□ -0.69
PBRM1-208ENST00000410007 KRT85P78386 507 aa10.76□□□□□ -0.69
PBRM1-208ENST00000410007 FLIIQ13045 1269 aa10.76□□□□□ -0.69
PBRM1-208ENST00000410007 LARP1BQ659C4 914 aaKnown RBP10.76□□□□□ -0.69
PBRM1-208ENST00000410007 PRPF40AO75400 957 aaKnown RBP10.75□□□□□ -0.69
PBRM1-208ENST00000410007 FILIP1LQ4L180 1135 aa10.75□□□□□ -0.69
PBRM1-208ENST00000410007 STK11IPQ8N1F8 1099 aa10.75□□□□□ -0.69
PBRM1-208ENST00000410007 CNKSR2Q8WXI2 1034 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms