RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 PIP4K2BP78356 416 aa29.97■■■□□ 2.39
PMS1-205ENST00000409985 TTC21BQ7Z4L5 1316 aa29.97■■■□□ 2.39
PMS1-205ENST00000409985 MBIPQ9NS73 344 aa29.97■■■□□ 2.39
PMS1-205ENST00000409985 ZRANB1Q9UGI0 708 aa29.97■■■□□ 2.39
PMS1-205ENST00000409985 ABCC4O15439 1325 aa29.96■■■□□ 2.39
PMS1-205ENST00000409985 ZBTB7BO15156 539 aaPredicted RBP29.96■■■□□ 2.39
PMS1-205ENST00000409985 PXDNQ92626 1479 aa29.95■■■□□ 2.39
PMS1-205ENST00000409985 GCC1Q96CN9 775 aa29.95■■■□□ 2.39
PMS1-205ENST00000409985 NHSL1Q5SYE7 1610 aa29.95■■■□□ 2.39
PMS1-205ENST00000409985 USP31Q70CQ4 1352 aa29.95■■■□□ 2.39
PMS1-205ENST00000409985 TRPM3Q9HCF6 1732 aaPredicted RBP29.94■■■□□ 2.38
PMS1-205ENST00000409985 API5Q9BZZ5 524 aaKnown RBP29.93■■■□□ 2.38
PMS1-205ENST00000409985 PSME1Q06323 249 aa29.93■■■□□ 2.38
PMS1-205ENST00000409985 TWISTNBQ3B726 338 aaPredicted RBP29.92■■■□□ 2.38
PMS1-205ENST00000409985 KRT28Q7Z3Y7 464 aa29.92■■■□□ 2.38
PMS1-205ENST00000409985 GSE1Q14687 1217 aa29.91■■■□□ 2.38
PMS1-205ENST00000409985 RRS1Q15050 365 aaKnown RBP29.91■■■□□ 2.38
PMS1-205ENST00000409985 RGPD1P0DJD0 1748 aa29.91■■■□□ 2.38
PMS1-205ENST00000409985 NPHP3Q7Z494 1330 aa29.91■■■□□ 2.38
PMS1-205ENST00000409985 SOS2Q07890 1332 aaPredicted RBP29.89■■■□□ 2.38
PMS1-205ENST00000409985 TTC21AQ8NDW8 1320 aa29.89■■■□□ 2.38
PMS1-205ENST00000409985 CHD1LQ86WJ1 897 aa29.89■■■□□ 2.37
PMS1-205ENST00000409985 TSPYL6Q8N831 410 aa29.89■■■□□ 2.37
PMS1-205ENST00000409985 THUMPD2Q9BTF0 503 aaKnown RBP29.89■■■□□ 2.37
PMS1-205ENST00000409985 PIK3C2AO00443 1686 aa29.88■■■□□ 2.37
PMS1-205ENST00000409985 EIF4A2Q14240 407 aaKnown RBP29.87■■■□□ 2.37
PMS1-205ENST00000409985 KIAA0232Q92628 1395 aa29.87■■■□□ 2.37
PMS1-205ENST00000409985 AHDC1Q5TGY3 1603 aaPredicted RBP29.87■■■□□ 2.37
PMS1-205ENST00000409985 C22orf23Q9BZE7 217 aa29.86■■■□□ 2.37
PMS1-205ENST00000409985 ANTXR1Q9H6X2 564 aa29.85■■■□□ 2.37
PMS1-205ENST00000409985 BMP2KLQ5H9B9 411 aa29.84■■■□□ 2.37
PMS1-205ENST00000409985 ALS2Q96Q42 1657 aa29.84■■■□□ 2.37
PMS1-205ENST00000409985 C8orf58Q8NAV2 365 aa29.83■■■□□ 2.37
PMS1-205ENST00000409985 TBC1D2Q9BYX2 928 aa29.83■■■□□ 2.37
PMS1-205ENST00000409985 MARF1Q9Y4F3 1742 aaKnown RBP29.83■■■□□ 2.37
PMS1-205ENST00000409985 ARHGEF10O15013 1369 aa29.82■■■□□ 2.36
PMS1-205ENST00000409985 CHL1O00533 1208 aa29.82■■■□□ 2.36
PMS1-205ENST00000409985 NUTM2GQ5VZR2 741 aa29.82■■■□□ 2.36
PMS1-205ENST00000409985 PEAK1Q9H792 1746 aa29.81■■■□□ 2.36
PMS1-205ENST00000409985 FRAT2O75474 233 aaPredicted RBP29.8■■■□□ 2.36
PMS1-205ENST00000409985 SBNO1A3KN83 1393 aa29.8■■■□□ 2.36
PMS1-205ENST00000409985 SPATA31A3Q5VYP0 1347 aa29.8■■■□□ 2.36
PMS1-205ENST00000409985 COL16A1Q07092 1604 aaPredicted RBP29.8■■■□□ 2.36
PMS1-205ENST00000409985 EIF5BO60841 1220 aaKnown RBP29.8■■■□□ 2.36
PMS1-205ENST00000409985 SULT6B1Q6IMI4 303 aa29.8■■■□□ 2.36
PMS1-205ENST00000409985 PHLPP1O60346 1717 aa29.78■■■□□ 2.36
PMS1-205ENST00000409985 RBM25P49756 843 aaKnown RBP29.78■■■□□ 2.36
PMS1-205ENST00000409985 INTS3Q68E01 1043 aaKnown RBP29.78■■■□□ 2.36
PMS1-205ENST00000409985 ABTB2Q8N961 1025 aa29.78■■■□□ 2.36
PMS1-205ENST00000409985 TNS3Q68CZ2 1445 aa29.78■■■□□ 2.36
PMS1-205ENST00000409985 FAM83GA6ND36 823 aa29.76■■■□□ 2.35
PMS1-205ENST00000409985 LNPKQ9C0E8 428 aa29.76■■■□□ 2.35
PMS1-205ENST00000409985 MFAP1P55081 439 aaKnown RBP29.74■■■□□ 2.35
PMS1-205ENST00000409985 PTPRCP08575 1304 aa29.74■■■□□ 2.35
PMS1-205ENST00000409985 LMOD2Q6P5Q4 547 aa29.74■■■□□ 2.35
PMS1-205ENST00000409985 KDRP35968 1356 aa29.73■■■□□ 2.35
PMS1-205ENST00000409985 NLRP6P59044 892 aa29.73■■■□□ 2.35
PMS1-205ENST00000409985 AEBP1Q8IUX7 1158 aa29.73■■■□□ 2.35
PMS1-205ENST00000409985 SIRT2Q8IXJ6 389 aa29.73■■■□□ 2.35
PMS1-205ENST00000409985 USP54Q70EL1 1684 aa29.73■■■□□ 2.35
PMS1-205ENST00000409985 FLT4P35916 1363 aa29.72■■■□□ 2.35
PMS1-205ENST00000409985 ELL2O00472 640 aaPredicted RBP29.72■■■□□ 2.35
PMS1-205ENST00000409985 ANKRD45Q5TZF3 282 aa29.72■■■□□ 2.35
PMS1-205ENST00000409985 CRB1P82279 1406 aa29.72■■■□□ 2.35
PMS1-205ENST00000409985 MED1Q15648 1581 aaPredicted RBP29.71■■■□□ 2.35
PMS1-205ENST00000409985 SNX21Q969T3 373 aa29.71■■■□□ 2.35
PMS1-205ENST00000409985 PLEKHG5O94827 1062 aa29.7■■■□□ 2.35
PMS1-205ENST00000409985 DCTN1Q14203 1278 aa29.7■■■□□ 2.34
PMS1-205ENST00000409985 HSP90AB2PQ58FF8 381 aa29.7■■■□□ 2.34
PMS1-205ENST00000409985 HSPA1LP34931 641 aa29.69■■■□□ 2.34
PMS1-205ENST00000409985 RGS12O14924 1447 aa29.68■■■□□ 2.34
PMS1-205ENST00000409985 CRYBG1Q9Y4K1 1723 aa29.68■■■□□ 2.34
PMS1-205ENST00000409985 CABLES1Q8TDN4 633 aa29.68■■■□□ 2.34
PMS1-205ENST00000409985 RPAP2Q8IXW5 612 aaPredicted RBP29.68■■■□□ 2.34
PMS1-205ENST00000409985 DCTPP1Q9H773 170 aa29.68■■■□□ 2.34
PMS1-205ENST00000409985 HTATSF1O43719 755 aaKnown RBP29.67■■■□□ 2.34
PMS1-205ENST00000409985 LRRC59Q96AG4 307 aaKnown RBP29.67■■■□□ 2.34
PMS1-205ENST00000409985 SLKQ9H2G2 1235 aaPredicted RBP29.66■■■□□ 2.34
PMS1-205ENST00000409985 MAP3K19Q56UN5 1328 aa29.66■■■□□ 2.34
PMS1-205ENST00000409985 CHMP5Q9NZZ3 219 aa29.65■■■□□ 2.34
PMS1-205ENST00000409985 IGSF1Q8N6C5 1336 aa29.64■■■□□ 2.34
PMS1-205ENST00000409985 ANKRD44Q8N8A2 993 aa29.64■■■□□ 2.34
PMS1-205ENST00000409985 SOX12O15370 315 aa29.63■■■□□ 2.33
PMS1-205ENST00000409985 HSCBQ8IWL3 235 aa29.63■■■□□ 2.33
PMS1-205ENST00000409985 SLIT3O75094 1523 aa29.63■■■□□ 2.33
PMS1-205ENST00000409985 C1orf115Q9H7X2 142 aa29.63■■■□□ 2.33
PMS1-205ENST00000409985 GAS2L2Q8NHY3 880 aa29.62■■■□□ 2.33
PMS1-205ENST00000409985 SOS1Q07889 1333 aaPredicted RBP29.62■■■□□ 2.33
PMS1-205ENST00000409985 PHRF1Q9P1Y6 1649 aaKnown RBP29.61■■■□□ 2.33
PMS1-205ENST00000409985 NFAT5O94916 1531 aa29.61■■■□□ 2.33
PMS1-205ENST00000409985 ATP10DQ9P241 1426 aa29.61■■■□□ 2.33
PMS1-205ENST00000409985 ABCA3Q99758 1704 aa29.6■■■□□ 2.33
PMS1-205ENST00000409985 MCM10Q7L590 875 aa29.6■■■□□ 2.33
PMS1-205ENST00000409985 COL22A1Q8NFW1 1626 aaPredicted RBP29.6■■■□□ 2.33
PMS1-205ENST00000409985 GCP02774 474 aa29.59■■■□□ 2.33
PMS1-205ENST00000409985 RTF1Q92541 710 aaKnown RBP29.59■■■□□ 2.33
PMS1-205ENST00000409985 LRRC37A3O60309 1634 aa29.58■■■□□ 2.33
PMS1-205ENST00000409985 RTL1A6NKG5 1358 aa29.57■■■□□ 2.32
PMS1-205ENST00000409985 CDC45O75419 566 aa29.57■■■□□ 2.32
PMS1-205ENST00000409985 BABAM1Q9NWV8 329 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms