RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 NALCNQ8IZF0 1738 aa10.98□□□□□ -0.65
LINC01139-201ENST00000400946 DLG5Q8TDM6 1919 aa10.98□□□□□ -0.65
LINC01139-201ENST00000400946 ZBTB7BO15156 539 aaPredicted RBP10.98□□□□□ -0.65
LINC01139-201ENST00000400946 SNX21Q969T3 373 aa10.98□□□□□ -0.65
LINC01139-201ENST00000400946 METP08581 1390 aa10.97□□□□□ -0.65
LINC01139-201ENST00000400946 KIAA0232Q92628 1395 aa10.97□□□□□ -0.65
LINC01139-201ENST00000400946 TMEM2Q9UHN6 1383 aa10.97□□□□□ -0.65
LINC01139-201ENST00000400946 PLEKHG3A1L390 1219 aa10.97□□□□□ -0.65
LINC01139-201ENST00000400946 WAPLQ7Z5K2 1190 aa10.97□□□□□ -0.65
LINC01139-201ENST00000400946 CHD1LQ86WJ1 897 aa10.97□□□□□ -0.65
LINC01139-201ENST00000400946 TBC1D2Q9BYX2 928 aa10.97□□□□□ -0.65
LINC01139-201ENST00000400946 FRAT2O75474 233 aaPredicted RBP10.96□□□□□ -0.65
LINC01139-201ENST00000400946 ANKLE2Q86XL3 938 aa10.96□□□□□ -0.65
LINC01139-201ENST00000400946 CHMP5Q9NZZ3 219 aa10.96□□□□□ -0.65
LINC01139-201ENST00000400946 USP31Q70CQ4 1352 aa10.95□□□□□ -0.66
LINC01139-201ENST00000400946 PLEKHG1Q9ULL1 1385 aa10.95□□□□□ -0.66
LINC01139-201ENST00000400946 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
LINC01139-201ENST00000400946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC01139-201ENST00000400946 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
LINC01139-201ENST00000400946 NCOA3Q9Y6Q9 1424 aa10.95□□□□□ -0.66
LINC01139-201ENST00000400946 RGPD1P0DJD0 1748 aa10.95□□□□□ -0.66
LINC01139-201ENST00000400946 TTC21BQ7Z4L5 1316 aa10.95□□□□□ -0.66
LINC01139-201ENST00000400946 OVOS2A0A0J9YW53 1432 aa10.94□□□□□ -0.66
LINC01139-201ENST00000400946 PTMSP20962 102 aa10.94□□□□□ -0.66
LINC01139-201ENST00000400946 TWISTNBQ3B726 338 aaPredicted RBP10.94□□□□□ -0.66
LINC01139-201ENST00000400946 OVOS2Q6IE36 1432 aa10.94□□□□□ -0.66
LINC01139-201ENST00000400946 CERKQ8TCT0 537 aa10.94□□□□□ -0.66
LINC01139-201ENST00000400946 PHACTR3Q96KR7 559 aa10.94□□□□□ -0.66
LINC01139-201ENST00000400946 ADAMTS13Q76LX8 1427 aa10.94□□□□□ -0.66
LINC01139-201ENST00000400946 CLCN6P51797 869 aa10.94□□□□□ -0.66
LINC01139-201ENST00000400946 L1TD1Q5T7N2 865 aaKnown RBP10.94□□□□□ -0.66
LINC01139-201ENST00000400946 INTS3Q68E01 1043 aaKnown RBP10.94□□□□□ -0.66
LINC01139-201ENST00000400946 MBIPQ9NS73 344 aa10.94□□□□□ -0.66
LINC01139-201ENST00000400946 ISY1Q9ULR0 285 aaKnown RBP10.94□□□□□ -0.66
LINC01139-201ENST00000400946 LTBP4Q8N2S1 1624 aa10.94□□□□□ -0.66
LINC01139-201ENST00000400946 ARHGAP23Q9P227 1491 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 TTC21AQ8NDW8 1320 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 SLIT1O75093 1534 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 DIP2AQ14689 1571 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
LINC01139-201ENST00000400946 NME9Q86XW9 330 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 FBXO41Q8TF61 875 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 PODXL2Q9NZ53 605 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 EMILIN1Q9Y6C2 1016 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 PTPRCP08575 1304 aa10.93□□□□□ -0.66
LINC01139-201ENST00000400946 SOS1Q07889 1333 aaPredicted RBP10.93□□□□□ -0.66
LINC01139-201ENST00000400946 SSH2Q76I76 1423 aa10.92□□□□□ -0.66
LINC01139-201ENST00000400946 TPRNQ4KMQ1 711 aa10.92□□□□□ -0.66
LINC01139-201ENST00000400946 RPAP2Q8IXW5 612 aaPredicted RBP10.92□□□□□ -0.66
LINC01139-201ENST00000400946 NPHP4O75161 1426 aaPredicted RBP10.91□□□□□ -0.66
LINC01139-201ENST00000400946 USP6P35125 1406 aa10.91□□□□□ -0.66
LINC01139-201ENST00000400946 CHL1O00533 1208 aa10.91□□□□□ -0.66
LINC01139-201ENST00000400946 LTKP29376 864 aa10.91□□□□□ -0.66
LINC01139-201ENST00000400946 TXNDC2Q86VQ3 553 aa10.91□□□□□ -0.66
LINC01139-201ENST00000400946 ZNF335Q9H4Z2 1342 aaPredicted RBP10.91□□□□□ -0.66
LINC01139-201ENST00000400946 ARHGEF10O15013 1369 aa10.91□□□□□ -0.66
LINC01139-201ENST00000400946 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.91□□□□□ -0.66
LINC01139-201ENST00000400946 DDX11L8A8MPP1 907 aa10.9□□□□□ -0.66
LINC01139-201ENST00000400946 HTATSF1O43719 755 aaKnown RBP10.9□□□□□ -0.66
LINC01139-201ENST00000400946 HMOX1P09601 288 aa10.9□□□□□ -0.66
LINC01139-201ENST00000400946 IL27Q8NEV9 243 aa10.9□□□□□ -0.66
LINC01139-201ENST00000400946 DCTPP1Q9H773 170 aa10.9□□□□□ -0.66
LINC01139-201ENST00000400946 FARP1Q9Y4F1 1045 aaPredicted RBP10.9□□□□□ -0.66
LINC01139-201ENST00000400946 USP54Q70EL1 1684 aa10.9□□□□□ -0.66
LINC01139-201ENST00000400946 PTPRUQ92729 1446 aa10.9□□□□□ -0.66
LINC01139-201ENST00000400946 MFAP1P55081 439 aaKnown RBP10.89□□□□□ -0.67
LINC01139-201ENST00000400946 PRR36Q9H6K5 1346 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 ROBO2Q9HCK4 1378 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 FMN2Q9NZ56 1722 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 MCM4P33991 863 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 DDIT3P35638 169 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 ANKRD45Q5TZF3 282 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 OTUD5Q96G74 571 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 LNPKQ9C0E8 428 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 TBX22Q9Y458 520 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 EID1Q9Y6B2 187 aa10.89□□□□□ -0.67
LINC01139-201ENST00000400946 CDC45O75419 566 aa10.88□□□□□ -0.67
LINC01139-201ENST00000400946 EIF4A2Q14240 407 aaKnown RBP10.88□□□□□ -0.67
LINC01139-201ENST00000400946 TSPYL6Q8N831 410 aa10.88□□□□□ -0.67
LINC01139-201ENST00000400946 ANKRD44Q8N8A2 993 aa10.88□□□□□ -0.67
LINC01139-201ENST00000400946 C8orf58Q8NAV2 365 aa10.88□□□□□ -0.67
LINC01139-201ENST00000400946 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
LINC01139-201ENST00000400946 SLKQ9H2G2 1235 aaPredicted RBP10.88□□□□□ -0.67
LINC01139-201ENST00000400946 BABAM1Q9NWV8 329 aa10.88□□□□□ -0.67
LINC01139-201ENST00000400946 RTL1A6NKG5 1358 aa10.88□□□□□ -0.67
LINC01139-201ENST00000400946 KDRP35968 1356 aa10.88□□□□□ -0.67
LINC01139-201ENST00000400946 ANKARQ7Z5J8 1434 aa10.88□□□□□ -0.67
LINC01139-201ENST00000400946 CACNA1FO60840 1977 aa10.87□□□□□ -0.67
LINC01139-201ENST00000400946 SBNO1A3KN83 1393 aa10.87□□□□□ -0.67
LINC01139-201ENST00000400946 ACEP12821 1306 aa10.87□□□□□ -0.67
LINC01139-201ENST00000400946 SKOR2Q2VWA4 1001 aaPredicted RBP10.86□□□□□ -0.67
LINC01139-201ENST00000400946 SIRT2Q8IXJ6 389 aa10.86□□□□□ -0.67
LINC01139-201ENST00000400946 PEAK1Q9H792 1746 aa10.86□□□□□ -0.67
LINC01139-201ENST00000400946 RGS12O14924 1447 aa10.85□□□□□ -0.67
LINC01139-201ENST00000400946 CRB1P82279 1406 aa10.85□□□□□ -0.67
LINC01139-201ENST00000400946 ATP10DQ9P241 1426 aa10.85□□□□□ -0.67
LINC01139-201ENST00000400946 FLT4P35916 1363 aa10.85□□□□□ -0.67
LINC01139-201ENST00000400946 HMMRO75330 724 aa10.85□□□□□ -0.67
LINC01139-201ENST00000400946 CLEC17AQ6ZS10 378 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms