RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 POLR1AO95602 1720 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 ERVK-7P63135 1459 aa7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 RPRD2Q5VT52 1461 aaKnown RBP7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 TNRQ92752 1358 aa7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 E9PCH4 1651 aa7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 HFM1A2PYH4 1435 aa7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 OSBPP22059 807 aa7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 CLCN1P35523 988 aa7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 CLK2P49760 499 aaKnown RBP7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 UBR1Q8IWV7 1749 aa7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 BCL2L13Q9BXK5 485 aa7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 PCDHGA4Q9Y5G9 962 aa7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 PLA2R1Q13018 1463 aa7.48□□□□□ -1.21
HMGB3P7-201ENST00000400214 HSPA2P54652 639 aa7.47□□□□□ -1.21
HMGB3P7-201ENST00000400214 MDM2Q00987 491 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P7-201ENST00000400214 TMEM259Q4ZIN3 620 aa7.47□□□□□ -1.21
HMGB3P7-201ENST00000400214 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
HMGB3P7-201ENST00000400214 PPP1R12CQ9BZL4 782 aa7.47□□□□□ -1.21
HMGB3P7-201ENST00000400214 GPCPD1Q9NPB8 672 aa7.47□□□□□ -1.21
HMGB3P7-201ENST00000400214 BCCIPQ9P287 314 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGB3P7-201ENST00000400214 SYNMO15061 1565 aa7.46□□□□□ -1.21
HMGB3P7-201ENST00000400214 NOS1P29475 1434 aa7.46□□□□□ -1.21
HMGB3P7-201ENST00000400214 PIK3C2BO00750 1634 aa7.46□□□□□ -1.21
HMGB3P7-201ENST00000400214 MYO5BQ9ULV0 1848 aa7.46□□□□□ -1.21
HMGB3P7-201ENST00000400214 ERCC3P19447 782 aa7.46□□□□□ -1.22
HMGB3P7-201ENST00000400214 ITGAEP38570 1179 aa7.46□□□□□ -1.22
HMGB3P7-201ENST00000400214 ZC3H6P61129 1189 aaKnown RBP7.46□□□□□ -1.22
HMGB3P7-201ENST00000400214 GIMAP6Q6P9H5 292 aa7.46□□□□□ -1.22
HMGB3P7-201ENST00000400214 ZNF526Q8TF50 670 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P7-201ENST00000400214 UGGT1Q9NYU2 1555 aa7.46□□□□□ -1.22
HMGB3P7-201ENST00000400214 PTPRTO14522 1441 aa7.45□□□□□ -1.22
HMGB3P7-201ENST00000400214 SPHKAPQ2M3C7 1700 aa7.45□□□□□ -1.22
HMGB3P7-201ENST00000400214 MARCH6O60337 910 aa7.45□□□□□ -1.22
HMGB3P7-201ENST00000400214 CDCA8Q53HL2 280 aa7.45□□□□□ -1.22
HMGB3P7-201ENST00000400214 GIPC2Q8TF65 315 aa7.45□□□□□ -1.22
HMGB3P7-201ENST00000400214 KCTD12Q96CX2 325 aaKnown RBP7.45□□□□□ -1.22
HMGB3P7-201ENST00000400214 PSDA5PKW4 1024 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P7-201ENST00000400214 C2orf72A6NCS6 295 aa7.44□□□□□ -1.22
HMGB3P7-201ENST00000400214 NAALADL2Q58DX5 795 aa7.44□□□□□ -1.22
HMGB3P7-201ENST00000400214 DMRTA1Q5VZB9 504 aa7.44□□□□□ -1.22
HMGB3P7-201ENST00000400214 ZNF662Q6ZS27 426 aa7.44□□□□□ -1.22
HMGB3P7-201ENST00000400214 NUP155O75694 1391 aa7.44□□□□□ -1.22
HMGB3P7-201ENST00000400214 NEURL4Q96JN8 1562 aa7.43□□□□□ -1.22
HMGB3P7-201ENST00000400214 CLSTN1O94985 981 aa7.43□□□□□ -1.22
HMGB3P7-201ENST00000400214 ATG7O95352 703 aa7.43□□□□□ -1.22
HMGB3P7-201ENST00000400214 LMOD1P29536 600 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P7-201ENST00000400214 PHOX2BQ99453 314 aa7.43□□□□□ -1.22
HMGB3P7-201ENST00000400214 PRDM16Q9HAZ2 1276 aa7.43□□□□□ -1.22
HMGB3P7-201ENST00000400214 GPHNQ9NQX3 736 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P7-201ENST00000400214 MED14O60244 1454 aa7.43□□□□□ -1.22
HMGB3P7-201ENST00000400214 ARHGAP23Q9P227 1491 aa7.43□□□□□ -1.22
HMGB3P7-201ENST00000400214 SLIT1O75093 1534 aa7.42□□□□□ -1.22
HMGB3P7-201ENST00000400214 A0A0G2JS52 829 aa7.42□□□□□ -1.22
HMGB3P7-201ENST00000400214 PALM3A6NDB9 673 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P7-201ENST00000400214 PTGDRQ13258 359 aa7.42□□□□□ -1.22
HMGB3P7-201ENST00000400214 THEMISQ8N1K5 641 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P7-201ENST00000400214 CCER1Q8TC90 406 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P7-201ENST00000400214 SLC52A1Q9NWF4 448 aa7.42□□□□□ -1.22
HMGB3P7-201ENST00000400214 TMEM131LA2VDJ0 1609 aa7.41□□□□□ -1.22
HMGB3P7-201ENST00000400214 IRX6P78412 446 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P7-201ENST00000400214 PPP2R2DQ66LE6 453 aa7.41□□□□□ -1.22
HMGB3P7-201ENST00000400214 PRM3Q9NNZ6 103 aa7.41□□□□□ -1.22
HMGB3P7-201ENST00000400214 ADGRB3O60242 1522 aa7.41□□□□□ -1.22
HMGB3P7-201ENST00000400214 IQGAP1P46940 1657 aa7.41□□□□□ -1.22
HMGB3P7-201ENST00000400214 KIF1BO60333 1816 aa7.41□□□□□ -1.22
HMGB3P7-201ENST00000400214 PRIM1P49642 420 aaKnown RBP7.4□□□□□ -1.22
HMGB3P7-201ENST00000400214 PSEN2P49810 448 aa7.4□□□□□ -1.22
HMGB3P7-201ENST00000400214 IDI1Q13907 227 aa7.4□□□□□ -1.22
HMGB3P7-201ENST00000400214 SF3A1Q15459 793 aaKnown RBP7.4□□□□□ -1.22
HMGB3P7-201ENST00000400214 B4GALNT3Q6L9W6 998 aa7.4□□□□□ -1.22
HMGB3P7-201ENST00000400214 TBC1D2Q9BYX2 928 aa7.4□□□□□ -1.22
HMGB3P7-201ENST00000400214 FAM217BQ9NTX9 383 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P7-201ENST00000400214 LTBP4Q8N2S1 1624 aa7.39□□□□□ -1.23
HMGB3P7-201ENST00000400214 TRPM2O94759 1503 aa7.39□□□□□ -1.23
HMGB3P7-201ENST00000400214 SETD5Q9C0A6 1442 aa7.39□□□□□ -1.23
HMGB3P7-201ENST00000400214 LOC102724159A0A0B4J2E5 919 aa7.39□□□□□ -1.23
HMGB3P7-201ENST00000400214 DSG2Q14126 1118 aa7.39□□□□□ -1.23
HMGB3P7-201ENST00000400214 PWP2Q15269 919 aaKnown RBP7.39□□□□□ -1.23
HMGB3P7-201ENST00000400214 ANKLE2Q86XL3 938 aa7.39□□□□□ -1.23
HMGB3P7-201ENST00000400214 LIMD1Q9UGP4 676 aa7.39□□□□□ -1.23
HMGB3P7-201ENST00000400214 SCAF11Q99590 1463 aaKnown RBP7.38□□□□□ -1.23
HMGB3P7-201ENST00000400214 TMEM2Q9UHN6 1383 aa7.38□□□□□ -1.23
HMGB3P7-201ENST00000400214 SOCS7O14512 581 aa7.38□□□□□ -1.23
HMGB3P7-201ENST00000400214 VAMP1P23763 118 aa7.38□□□□□ -1.23
HMGB3P7-201ENST00000400214 DPH6Q7L8W6 267 aa7.38□□□□□ -1.23
HMGB3P7-201ENST00000400214 TFIP11Q9UBB9 837 aaKnown RBP7.38□□□□□ -1.23
HMGB3P7-201ENST00000400214 RIPOR2Q9Y4F9 1068 aa7.38□□□□□ -1.23
HMGB3P7-201ENST00000400214 CLTCL1P53675 1640 aa7.38□□□□□ -1.23
HMGB3P7-201ENST00000400214 ZFYVE9O95405 1425 aa7.37□□□□□ -1.23
HMGB3P7-201ENST00000400214 RECKO95980 971 aa7.37□□□□□ -1.23
HMGB3P7-201ENST00000400214 PHLDB3Q6NSJ2 640 aa7.37□□□□□ -1.23
HMGB3P7-201ENST00000400214 MICAL1Q8TDZ2 1067 aa7.37□□□□□ -1.23
HMGB3P7-201ENST00000400214 NPHP4O75161 1426 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P7-201ENST00000400214 STRCP1A6NGW2 1772 aa7.36□□□□□ -1.23
HMGB3P7-201ENST00000400214 LTKP29376 864 aa7.36□□□□□ -1.23
HMGB3P7-201ENST00000400214 NPAS4Q8IUM7 802 aa7.36□□□□□ -1.23
HMGB3P7-201ENST00000400214 UCN2Q96RP3 112 aa7.36□□□□□ -1.23
HMGB3P7-201ENST00000400214 PPME1Q9Y570 386 aa7.36□□□□□ -1.23
HMGB3P7-201ENST00000400214 CHD2O14647 1828 aaKnown RBP7.36□□□□□ -1.23
HMGB3P7-201ENST00000400214 IQSEC2Q5JU85 1478 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms