RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 SALL3Q9BXA9 1300 aa16.61■□□□□ 0.25
SEC24B-202ENST00000399100 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
SEC24B-202ENST00000399100 GLI3P10071 1580 aa16.61■□□□□ 0.25
SEC24B-202ENST00000399100 CANXP27824 592 aaKnown RBP16.61■□□□□ 0.25
SEC24B-202ENST00000399100 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.61■□□□□ 0.25
SEC24B-202ENST00000399100 IL17RAQ96F46 866 aa16.61■□□□□ 0.25
SEC24B-202ENST00000399100 THUMPD2Q9BTF0 503 aaKnown RBP16.61■□□□□ 0.25
SEC24B-202ENST00000399100 ACEP12821 1306 aa16.61■□□□□ 0.25
SEC24B-202ENST00000399100 ABCC6O95255 1503 aa16.61■□□□□ 0.25
SEC24B-202ENST00000399100 AK9Q5TCS8 1911 aa16.61■□□□□ 0.25
SEC24B-202ENST00000399100 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
SEC24B-202ENST00000399100 ESF1Q9H501 851 aaKnown RBP16.6■□□□□ 0.25
SEC24B-202ENST00000399100 CLEC17AQ6ZS10 378 aa16.6■□□□□ 0.25
SEC24B-202ENST00000399100 COL18A1P39060 1754 aa16.6■□□□□ 0.25
SEC24B-202ENST00000399100 RTL5Q5HYW3 569 aaPredicted RBP16.59■□□□□ 0.25
SEC24B-202ENST00000399100 FTSJ3Q8IY81 847 aaKnown RBP16.59■□□□□ 0.25
SEC24B-202ENST00000399100 ITPRIPQ8IWB1 547 aa16.59■□□□□ 0.25
SEC24B-202ENST00000399100 TBX22Q9Y458 520 aa16.58■□□□□ 0.25
SEC24B-202ENST00000399100 HMOX1P09601 288 aa16.58■□□□□ 0.24
SEC24B-202ENST00000399100 DCTPP1Q9H773 170 aa16.58■□□□□ 0.24
SEC24B-202ENST00000399100 MSH6P52701 1360 aa16.58■□□□□ 0.24
SEC24B-202ENST00000399100 RGPD5Q99666 1765 aa16.58■□□□□ 0.24
SEC24B-202ENST00000399100 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
SEC24B-202ENST00000399100 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
SEC24B-202ENST00000399100 GSPT1P15170 499 aaKnown RBP16.57■□□□□ 0.24
SEC24B-202ENST00000399100 C22orf23Q9BZE7 217 aa16.57■□□□□ 0.24
SEC24B-202ENST00000399100 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
SEC24B-202ENST00000399100 LMOD3Q0VAK6 560 aa16.57■□□□□ 0.24
SEC24B-202ENST00000399100 COG3Q96JB2 828 aa16.57■□□□□ 0.24
SEC24B-202ENST00000399100 SCN11AQ9UI33 1791 aa16.57■□□□□ 0.24
SEC24B-202ENST00000399100 TWISTNBQ3B726 338 aaPredicted RBP16.56■□□□□ 0.24
SEC24B-202ENST00000399100 NUTM2FA1L443 756 aa16.56■□□□□ 0.24
SEC24B-202ENST00000399100 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
SEC24B-202ENST00000399100 FLT4P35916 1363 aa16.56■□□□□ 0.24
SEC24B-202ENST00000399100 MAP3K19Q56UN5 1328 aa16.55■□□□□ 0.24
SEC24B-202ENST00000399100 C5P01031 1676 aa16.55■□□□□ 0.24
SEC24B-202ENST00000399100 PTPRCP08575 1304 aa16.54■□□□□ 0.24
SEC24B-202ENST00000399100 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
SEC24B-202ENST00000399100 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
SEC24B-202ENST00000399100 PARP4Q9UKK3 1724 aaKnown RBP16.53■□□□□ 0.24
SEC24B-202ENST00000399100 KIF1AQ12756 1690 aa16.53■□□□□ 0.24
SEC24B-202ENST00000399100 ANKRD44Q8N8A2 993 aa16.53■□□□□ 0.24
SEC24B-202ENST00000399100 UBE2Q2Q8WVN8 375 aa16.53■□□□□ 0.24
SEC24B-202ENST00000399100 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
SEC24B-202ENST00000399100 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
SEC24B-202ENST00000399100 IL27Q8NEV9 243 aa16.52■□□□□ 0.24
SEC24B-202ENST00000399100 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.24
SEC24B-202ENST00000399100 STRCP1A6NGW2 1772 aa16.52■□□□□ 0.23
SEC24B-202ENST00000399100 BECN1Q14457 450 aa16.52■□□□□ 0.23
SEC24B-202ENST00000399100 OSBPL3Q9H4L5 887 aa16.52■□□□□ 0.23
SEC24B-202ENST00000399100 CD2BP2O95400 341 aaKnown RBP16.51■□□□□ 0.23
SEC24B-202ENST00000399100 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
SEC24B-202ENST00000399100 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
SEC24B-202ENST00000399100 CEP85Q6P2H3 762 aa16.5■□□□□ 0.23
SEC24B-202ENST00000399100 API5Q9BZZ5 524 aaKnown RBP16.5■□□□□ 0.23
SEC24B-202ENST00000399100 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
SEC24B-202ENST00000399100 HTATSF1O43719 755 aaKnown RBP16.5■□□□□ 0.23
SEC24B-202ENST00000399100 HSP90AB2PQ58FF8 381 aa16.5■□□□□ 0.23
SEC24B-202ENST00000399100 TBC1D9Q6ZT07 1266 aa16.5■□□□□ 0.23
SEC24B-202ENST00000399100 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
SEC24B-202ENST00000399100 CYP2E1P05181 493 aaPredicted RBP16.48■□□□□ 0.23
SEC24B-202ENST00000399100 DCTN1Q14203 1278 aa16.48■□□□□ 0.23
SEC24B-202ENST00000399100 HEG1Q9ULI3 1381 aa16.48■□□□□ 0.23
SEC24B-202ENST00000399100 PAPPAQ13219 1627 aa16.48■□□□□ 0.23
SEC24B-202ENST00000399100 BABAM1Q9NWV8 329 aa16.47■□□□□ 0.23
SEC24B-202ENST00000399100 MRC1P22897 1456 aa16.47■□□□□ 0.23
SEC24B-202ENST00000399100 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
SEC24B-202ENST00000399100 XIRP1Q702N8 1843 aaKnown RBP16.47■□□□□ 0.23
SEC24B-202ENST00000399100 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
SEC24B-202ENST00000399100 MCM4P33991 863 aa16.46■□□□□ 0.23
SEC24B-202ENST00000399100 RAB3GAP1Q15042 981 aa16.46■□□□□ 0.23
SEC24B-202ENST00000399100 TTC22Q5TAA0 569 aa16.46■□□□□ 0.23
SEC24B-202ENST00000399100 UBR2Q8IWV8 1755 aa16.46■□□□□ 0.23
SEC24B-202ENST00000399100 MTHFSDQ2M296 383 aaKnown RBP16.46■□□□□ 0.23
SEC24B-202ENST00000399100 LNPKQ9C0E8 428 aa16.46■□□□□ 0.23
SEC24B-202ENST00000399100 SULT6B1Q6IMI4 303 aa16.46■□□□□ 0.22
SEC24B-202ENST00000399100 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
SEC24B-202ENST00000399100 DAXXQ9UER7 740 aaPredicted RBP16.45■□□□□ 0.22
SEC24B-202ENST00000399100 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
SEC24B-202ENST00000399100 CIZ1Q9ULV3 898 aaPredicted RBP16.45■□□□□ 0.22
SEC24B-202ENST00000399100 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
SEC24B-202ENST00000399100 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
SEC24B-202ENST00000399100 RPAP2Q8IXW5 612 aaPredicted RBP16.44■□□□□ 0.22
SEC24B-202ENST00000399100 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
SEC24B-202ENST00000399100 CHMP5Q9NZZ3 219 aa16.43■□□□□ 0.22
SEC24B-202ENST00000399100 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
SEC24B-202ENST00000399100 AMOTL2Q9Y2J4 779 aa16.43■□□□□ 0.22
SEC24B-202ENST00000399100 EYA1Q99502 592 aa16.43■□□□□ 0.22
SEC24B-202ENST00000399100 RTN4Q9NQC3 1192 aaKnown RBP16.43■□□□□ 0.22
SEC24B-202ENST00000399100 NUP188Q5SRE5 1749 aa16.43■□□□□ 0.22
SEC24B-202ENST00000399100 MCM10Q7L590 875 aa16.42■□□□□ 0.22
SEC24B-202ENST00000399100 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
SEC24B-202ENST00000399100 DDX60Q8IY21 1712 aaKnown RBP16.41■□□□□ 0.22
SEC24B-202ENST00000399100 MFAP1P55081 439 aaKnown RBP16.41■□□□□ 0.22
SEC24B-202ENST00000399100 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
SEC24B-202ENST00000399100 FOXO3O43524 673 aa16.4■□□□□ 0.22
SEC24B-202ENST00000399100 HOXC9P31274 260 aa16.39■□□□□ 0.22
SEC24B-202ENST00000399100 PXDNQ92626 1479 aa16.39■□□□□ 0.21
SEC24B-202ENST00000399100 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
SEC24B-202ENST00000399100 G2E3Q7L622 706 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms